BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0434500 Os07g0434500|J023009J24
(909 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0434500 DEAD/DEAH box helicase, N-terminal domain cont... 1884 0.0
Os06g0255700 DEAD/DEAH box helicase, N-terminal domain cont... 1658 0.0
Os03g0165266 DEAD/DEAH box helicase, N-terminal domain cont... 679 0.0
Os08g0289300 DEAD/DEAH box helicase, N-terminal domain cont... 421 e-117
Os02g0650800 306 3e-83
Os05g0392400 SNF2-related domain containing protein 211 2e-54
Os07g0692600 SNF2-related domain containing protein 196 5e-50
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 177 4e-44
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 128 2e-29
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 127 3e-29
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 117 3e-26
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 115 1e-25
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 111 3e-24
Os02g0762800 DEAD/DEAH box helicase, N-terminal domain cont... 100 6e-21
Os05g0150300 Similar to Possible global transcription activ... 94 3e-19
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 72 2e-12
Os01g0367900 Similar to Possible global transcription activ... 70 6e-12
>Os07g0434500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 909
Score = 1884 bits (4880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 909/909 (100%), Positives = 909/909 (100%)
Query: 1 MAAAGRDPPATPSSRMYYCRQRKASSEVNANVFVPGGQNGISFPASNRAHDWGYGGVREE 60
MAAAGRDPPATPSSRMYYCRQRKASSEVNANVFVPGGQNGISFPASNRAHDWGYGGVREE
Sbjct: 1 MAAAGRDPPATPSSRMYYCRQRKASSEVNANVFVPGGQNGISFPASNRAHDWGYGGVREE 60
Query: 61 WEASYARKLQLINFLSSLHQRTANSLITTRMDANMDTPLEQKQKDSSAIIVLDSDDEDEA 120
WEASYARKLQLINFLSSLHQRTANSLITTRMDANMDTPLEQKQKDSSAIIVLDSDDEDEA
Sbjct: 61 WEASYARKLQLINFLSSLHQRTANSLITTRMDANMDTPLEQKQKDSSAIIVLDSDDEDEA 120
Query: 121 ERCEQLASENNKQQAPSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPYGQNAPLIN 180
ERCEQLASENNKQQAPSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPYGQNAPLIN
Sbjct: 121 ERCEQLASENNKQQAPSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPYGQNAPLIN 180
Query: 181 QSPLQTSWQPSIQYERVILQRRPEEQRVQDLVAASHAEKIAETQVFLTLPTLPNERKRRK 240
QSPLQTSWQPSIQYERVILQRRPEEQRVQDLVAASHAEKIAETQVFLTLPTLPNERKRRK
Sbjct: 181 QSPLQTSWQPSIQYERVILQRRPEEQRVQDLVAASHAEKIAETQVFLTLPTLPNERKRRK 240
Query: 241 SEPTTLVDGDGGTNLGKGKRKNHQNQAAVDSILDLQQTVVPLQQNDVPSQSYRTMIEEEK 300
SEPTTLVDGDGGTNLGKGKRKNHQNQAAVDSILDLQQTVVPLQQNDVPSQSYRTMIEEEK
Sbjct: 241 SEPTTLVDGDGGTNLGKGKRKNHQNQAAVDSILDLQQTVVPLQQNDVPSQSYRTMIEEEK 300
Query: 301 PVKESDGLEDLWKDFSLAAECTKASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAI 360
PVKESDGLEDLWKDFSLAAECTKASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAI
Sbjct: 301 PVKESDGLEDLWKDFSLAAECTKASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAI 360
Query: 361 HPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSAR 420
HPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSAR
Sbjct: 361 HPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSAR 420
Query: 421 PLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYK 480
PLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYK
Sbjct: 421 PLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYK 480
Query: 481 QFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLS 540
QFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLS
Sbjct: 481 QFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLS 540
Query: 541 GTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVE 600
GTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVE
Sbjct: 541 GTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVE 600
Query: 601 DTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHK 660
DTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHK
Sbjct: 601 DTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHK 660
Query: 661 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFF 720
IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFF
Sbjct: 661 IEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFF 720
Query: 721 FNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMD 780
FNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMD
Sbjct: 721 FNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMD 780
Query: 781 QFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFV 840
QFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFV
Sbjct: 781 QFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFV 840
Query: 841 YRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIR 900
YRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIR
Sbjct: 841 YRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIR 900
Query: 901 QDIKALYRR 909
QDIKALYRR
Sbjct: 901 QDIKALYRR 909
>Os06g0255700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 946
Score = 1658 bits (4294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 828/946 (87%), Positives = 853/946 (90%), Gaps = 52/946 (5%)
Query: 16 MYYCRQRKASSEVNANVFVPGGQNGISFPASNRAHDWGYGGVREEWEASYARKLQLINFL 75
MYY RQRKASSE NANVF+PGG N ISFPASNR HDWGYGGV +EWEASYARKLQL+NFL
Sbjct: 1 MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFL 60
Query: 76 SSLHQRTANSLITTRMDANMDTPLEQKQKDSSAIIVLDSDDED-EAERCEQLASENNKQQ 134
SSLHQRTAN L+TTRMDANMDTPLEQKQKDSSAIIVLDSDDED E CEQL SENNKQQ
Sbjct: 61 SSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQ 120
Query: 135 APSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPY-GQNAPLINQSPLQTSWQPSIQ 193
APSG TSP TTWIVSSAKDQVNGTLHVDGVQSTQIVPY GQNAPLINQ PLQTSWQPSIQ
Sbjct: 121 APSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQ 180
Query: 194 YERVILQRRPEEQRVQDLVAASHAEKIAETQVFLTLPTLPNERKRRKSEPTTLVDGDGGT 253
YERVILQ+RPEEQRVQDLVAASHAEKIAETQV LTLPTLPNERKRRK+EPTTLVD DGGT
Sbjct: 181 YERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGT 240
Query: 254 NLGKGKRKNHQNQAAVDSILDLQQTVV-------------PLQQNDVPSQSYRTM----- 295
NLGK KRKNHQNQAAVDS LDLQQ V P++++D ++
Sbjct: 241 NLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAE 300
Query: 296 ---------IEEEKPVKESDGLED-------LWKDFS----------------LAAECTK 323
+ EK V + + ++D + +D + + K
Sbjct: 301 CTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKK 360
Query: 324 ASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNL 383
ASRTRTNYYESRSKDAD+IDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNL
Sbjct: 361 ASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNL 420
Query: 384 VGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVE 443
VGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVE
Sbjct: 421 VGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVE 480
Query: 444 DIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDRLL 503
DIPLYDFYSVKADKR EQLEVLKSWEA+MSILFLGYKQFSRIICGDGDGNIAAACRDRLL
Sbjct: 481 DIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLL 540
Query: 504 MVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFL 563
MVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFL
Sbjct: 541 MVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFL 600
Query: 564 KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLRELT 623
KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRK+HVIRSLRELT
Sbjct: 601 KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELT 660
Query: 624 KDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLS 683
KDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLS
Sbjct: 661 KDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLS 720
Query: 684 EISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILP 743
EISEGDAADRA+NLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILP
Sbjct: 721 EISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILP 780
Query: 744 MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGIS 803
MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGIS
Sbjct: 781 MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGIS 840
Query: 804 LVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 863
LVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI
Sbjct: 841 LVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900
Query: 864 PKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR 909
PKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR
Sbjct: 901 PKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR 946
>Os03g0165266 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1078
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/593 (56%), Positives = 437/593 (73%), Gaps = 15/593 (2%)
Query: 326 RTRTNYYESR------SKDADDIDTGAVKVSEDFIVSD-IAIHPRHAKQMRPHQLEGFSF 378
+ R Y +R S DAD ID + + E +V D + +HP+H++ M+PHQ+EGF+F
Sbjct: 486 KKRKQSYRARPSEHRNSSDADAIDKTSGAILE--VVPDALCLHPQHSQHMKPHQVEGFNF 543
Query: 379 LVKNLVG-DKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREF 437
LVKNL + PGGCILAHAPGSGKTF++ISF+ SFLAKYP+ RPL++LPKGIL TW+ EF
Sbjct: 544 LVKNLADENNPGGCILAHAPGSGKTFLIISFVHSFLAKYPAGRPLIILPKGILSTWRTEF 603
Query: 438 QRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAA 497
WQV+DIPLYDFYS KADKR+EQL+VL WE SIL LGY+QF+ I+ A
Sbjct: 604 LHWQVDDIPLYDFYSSKADKRSEQLKVLNLWEESRSILLLGYQQFACIVSDHTSDTEAIM 663
Query: 498 CRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDL 557
C+++LL VP+L+ILDEGHTPRN ETD+L SL+ ++TPRKVVLSGTLFQNHV EVFNIL L
Sbjct: 664 CQEKLLKVPSLVILDEGHTPRNEETDLLTSLENIRTPRKVVLSGTLFQNHVREVFNILKL 723
Query: 558 VRPKFLKMESSRPIARRIMSQVAISG--IRSLKGVHDSAFTESVEDTLLNDDNFTRKSHV 615
VR KFLKM+ SR I I+S+V + G RS K + D F + V++ L D N ++ +
Sbjct: 724 VRSKFLKMDKSRAIVNCILSKVDLMGKSARS-KNISDKDFFDLVQEHLQKDGNDKMRAVI 782
Query: 616 IRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTA 675
I++LRELT DVLHYY+G +LDELPG+VDF+VFL +S+KQ+ I+ ++ KF + + A
Sbjct: 783 IQNLRELTADVLHYYQGKLLDELPGIVDFTVFLNMSSKQEHIIKGLDGINKFAKRSRCNA 842
Query: 676 LYIHPCLSEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLL 735
+ +HPCL ++ DA D N+T+ + S+I I I DGVKAKF N+LSL+ + G K+L
Sbjct: 843 VSLHPCLKNANKADADD--GNVTNRKIGSIISGIDINDGVKAKFVHNLLSLSEATGGKVL 900
Query: 736 AFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSI 795
FSQY+ + FLE+L+ + GW IF ++G ++ D RE A+ +FNNS DA+V FGSI
Sbjct: 901 VFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNSPDARVFFGSI 960
Query: 796 KACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHE 855
KACGEGISLVGASR++ILDVH NPSV RQAIGRA+RPGQ K V+ YRLVAADSPE H
Sbjct: 961 KACGEGISLVGASRIVILDVHENPSVMRQAIGRAYRPGQSKMVYCYRLVAADSPEEDDHH 1020
Query: 856 TAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYR 908
TAFKKE + KLWFEW+ELC+++DF+L VD+ DSED LE++A++QDIKAL +
Sbjct: 1021 TAFKKERVSKLWFEWNELCSSDDFELATVDVSDSEDRFLESSALKQDIKALLK 1073
>Os08g0289300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 348
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/208 (96%), Positives = 202/208 (97%)
Query: 323 KASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKN 382
KASRTRTNYYESRSKDAD+IDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKN
Sbjct: 99 KASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKN 158
Query: 383 LVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQV 442
LVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGI TWKREFQ WQV
Sbjct: 159 LVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQV 218
Query: 443 EDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDRL 502
EDIPLYDFYSVKADKR EQLEVLK WEA+MSILFLGYKQFSRIICGDGDGNIAAAC DRL
Sbjct: 219 EDIPLYDFYSVKADKRVEQLEVLKYWEAQMSILFLGYKQFSRIICGDGDGNIAAACWDRL 278
Query: 503 LMVPNLLILDEGHTPRNRETDVLASLKR 530
LMVPNLLILDEGHTPRNRETDVLASLKR
Sbjct: 279 LMVPNLLILDEGHTPRNRETDVLASLKR 306
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
Query: 282 LQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKASRTRTNYYESRSKDADD 341
LQQNDVPSQSYRTMIEEEKPVKES+GLEDLWKDFSLAAECTK TN S KD DD
Sbjct: 1 LQQNDVPSQSYRTMIEEEKPVKESEGLEDLWKDFSLAAECTKLD---TNEDMSNEKDVDD 57
>Os02g0650800
Length = 1439
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 321/594 (54%), Gaps = 97/594 (16%)
Query: 368 MRPHQLEGFSFLVKNLVGDKP------------GGCILAHAPGSGKTFMLISFIQSFLAK 415
M PHQ EGF F+ + L G GGC+++HAPG+GKT + I+F+QS+ A
Sbjct: 882 MFPHQQEGFEFMWRKLAGGTSIEQLRNNANTIEGGCVISHAPGTGKTRLAITFVQSYFAF 941
Query: 416 YPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSV----KADKRTEQLEV------- 464
+P P+++ P+G+L TW++EF++W+V+ +P + S K D+ +QL +
Sbjct: 942 FPECCPVIIAPRGMLATWEQEFRKWKVK-VPFHVLNSKEINWKEDRTIKQLAIMDENLAQ 1000
Query: 465 ----------------LKSWEARMSILFLGYKQFSRIICGDG-DGNIAAACRDRLLMVPN 507
L SW SI+ + Y F ++ DGN+ R+ LL +P+
Sbjct: 1001 SLARNKLDHKFRRKLKLASWRKGSSIIGVSYTLFRKLANQSSMDGNMV---RNLLLEMPD 1057
Query: 508 LLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMES 567
LL+LDEGHTPRN+++ + L+ V+T ++++LSGT FQN E+ N+L L+RPKF
Sbjct: 1058 LLVLDEGHTPRNKKSLIWKVLEEVRTKKRIILSGTPFQNSFLELSNVLYLIRPKF----- 1112
Query: 568 SRPIARRIMSQVAISGIRSLKGVHDSAFTESVED--TLLNDDNFTRKSHVIRSLRELTKD 625
AR S +S K + +ED T L +N T K I +R++
Sbjct: 1113 ----ARHFAS-------KSFKKI-------GLEDYWTSLTLNNITEKK--IDEIRQILDP 1152
Query: 626 VLHYYKGDILDE-LPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGT--ALY----- 677
++H + GDIL + LPGL + V L QKEI+ +E +GT A Y
Sbjct: 1153 IVHIHNGDILQKSLPGLRESVVILNPLPHQKEIITAME-----NTVTMGTLDAEYKISLA 1207
Query: 678 -IHPCLSEISEGDAADRATNLTDATVDSLIESIIIKD--GVKAKFFFNILSLANSAGEKL 734
IHP L ++ +++ T+ D SL++S+ GVK KF I+ L + E++
Sbjct: 1208 SIHPFL--VTCAKLSEKETSSVDV---SLLKSLRPNPCVGVKTKFVLEIVRLCEAMKERV 1262
Query: 735 LAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNN-SADAKVLFG 793
L FSQY+ P+ + L K W G+EI ++SG+ +RE M+ FN+ ++AKV+
Sbjct: 1263 LVFSQYLEPLSLIMDQLSKMFNWIEGEEILLMSGNVLVQNREALMEAFNDMKSNAKVMLA 1322
Query: 794 SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKF 853
S KAC EGI+L+GASRV++LDV NPSV RQAIGRA+R GQ+K V+ Y L+ + E
Sbjct: 1323 STKACCEGITLIGASRVVLLDVVWNPSVGRQAIGRAYRIGQEKIVYTYNLITEGTKEKDK 1382
Query: 854 HETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALY 907
++ KK+ + KL F S+ F L+Q I + D++LEA +++K ++
Sbjct: 1383 YDRQAKKDHMSKLLF--SKEPHAAGFNLSQEVIFN--DKILEAMTSHRELKDMF 1432
>Os05g0392400 SNF2-related domain containing protein
Length = 450
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 227/432 (52%), Gaps = 49/432 (11%)
Query: 499 RDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLV 558
R LL P LL+LDEGHTPRN + + +L +V+T ++++LSGT FQN+ E++NIL LV
Sbjct: 21 RTILLENPGLLVLDEGHTPRNERSVIWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLV 80
Query: 559 RPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTL-------LNDDNFTR 611
RP+F +M +++ + + F++ E + + DDN +
Sbjct: 81 RPRFGEM---------FLTKTRVGRRHCVSKKQRDKFSDKYEKGVWASLTSNVTDDNAEK 131
Query: 612 KSHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIE---AYEKFK 668
+R + K +H + G IL LPGL + + LK QK I+ K+E + F+
Sbjct: 132 -------VRSILKPFVHIHNGTILRTLPGLRECVIVLKPLPLQKSIIRKVENVGSGNNFE 184
Query: 669 RSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESIIIK-------DGVKAKFFF 721
V + HP L A N+T+ SLI+ +++ +GVK +F
Sbjct: 185 HEYVISLASTHPSLVN---------AINMTEEEA-SLIDKPMLERLRSNPYEGVKTRFVM 234
Query: 722 NILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQ 781
++ L + EK+L FSQ+I P++ ++ L K W GKEI + G R+ +++
Sbjct: 235 EVVRLCEALKEKVLIFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEV 294
Query: 782 FNN-SADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFV 840
FNN +DA+VL S +AC EGISL GASRV++LDV NP+V RQAI RAFR GQ+K V+
Sbjct: 295 FNNPDSDARVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYT 354
Query: 841 YRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDD-----SEDELLE 895
Y L+ + E ++ +K+ + KL F + + L++ +++ SED++LE
Sbjct: 355 YNLITYGTGEGDKYDRQAEKDHLSKLVFSTEDEFSNVRNMLSKAEMEHCSKLISEDKVLE 414
Query: 896 ANAIRQDIKALY 907
+K ++
Sbjct: 415 EMTSHDQLKGMF 426
>Os07g0692600 SNF2-related domain containing protein
Length = 475
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 233/448 (52%), Gaps = 35/448 (7%)
Query: 460 EQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDR--------LLMVPNLLIL 511
+ L+ L W A S+L + Y F + D + R+R L+ P LLIL
Sbjct: 22 DSLDKLFKWHAHPSVLLMTYSSFLGMTKQD------SKVRNRYREFIAEVLMNNPGLLIL 75
Query: 512 DEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPI 571
DEGH PR+ ++ + L +V+T +++LSGT FQN+ E FN L L RP+F+ S +
Sbjct: 76 DEGHNPRSNKSKLRKLLMKVKTEFRILLSGTAFQNNFEEYFNTLCLARPRFIGDIMSELV 135
Query: 572 ARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLRELTKDVLHYYK 631
R V + + V AF E V + +D+ R S I L +LT+ + ++
Sbjct: 136 PERKRETVGRRA-KHQEAVARRAFVEKVGQKIESDNKHIR-SDGISLLNKLTRGFIDSFE 193
Query: 632 GDILDELPGLVDFSVFLKLSTKQKEIVHKIE----AYEKF--KRSAVGTALYIHPCLSEI 685
G L LPG+ ++VF+K + Q+E++ K+ +F + + T IHP L +
Sbjct: 194 GAKLINLPGIHVYTVFMKPTDIQEEMLAKVTMPKLGSSRFPLEVELLITIGSIHPWLIKT 253
Query: 686 SEGDAADRATNLTDATVDSLIESII--IKDGVKAKFFFNILSLANSAGEKLLAFSQYILP 743
++ +T + A V +E G KAKF ++L ++ GE++L F + P
Sbjct: 254 TKA----VSTFFSPAEVKK-VERYKRDFAAGCKAKFVIDLLHKSSFRGERVLIFCHNVSP 308
Query: 744 MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFN--NSADAKVLFGSIKACGEG 801
+ FL +L+ GW +G+E+ ++ GD R MD+FN ++ KVL S AC EG
Sbjct: 309 ITFLVKLIEMVFGWRLGEEVLVLQGDQELPVRSDVMDKFNGDSAGKRKVLIASTTACAEG 368
Query: 802 ISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKE 861
ISL GASR+++LD N S TRQAI RAFR GQ++ V+VY LVA+ + E + + + +K
Sbjct: 369 ISLTGASRLVMLDSEWNHSKTRQAIARAFRRGQERTVYVYLLVASGTWEEEKYNSNRRKA 428
Query: 862 VIPKLWFEWSELCTTEDFKLNQV-DIDD 888
+ K+ F + +D N+V DIDD
Sbjct: 429 WMSKMVFLGRYV---DDSSQNRVTDIDD 453
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 154/579 (26%), Positives = 267/579 (46%), Gaps = 105/579 (18%)
Query: 367 QMRPHQLEGFSFLVKNLV--------GDKPGGCILAHAPGSGKTFMLISFIQSFL--AKY 416
+++PHQ+ G F+ +N++ GDK GCILAH G GKTF +I+F+ + + +
Sbjct: 714 KLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQL 773
Query: 417 PSARPLVVLPKGILGTWKREFQRW-QVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSIL 475
L+V P +L WK+EF +W E PL Y ++ R +LK W + +L
Sbjct: 774 GLRTALIVTPVNVLHNWKKEFIKWCPAESKPLR-VYMLEDVPRANIQYLLKKWRIKGGVL 832
Query: 476 FLGYKQFSRIICGDG--DGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQT 533
+GY F + G D +A + L P++L+ DE H +NR D +LK+V+T
Sbjct: 833 LIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHIIKNRRADTTQALKQVRT 892
Query: 534 PRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDS 593
R++ L+G+ QN++ E + ++D VR +L SS R + + G H +
Sbjct: 893 QRRIALTGSPLQNNLMEYYCMVDFVREGYLG--SSHEFRNRFQNPIE-------NGQHTN 943
Query: 594 AFTESVEDTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDIL-DELPGLVDFSVFLKLST 652
+ ++ V+ ++N ++SH+ L E K + +++ ++LP F V +KLS
Sbjct: 944 STSDDVK--IMN-----QRSHI---LYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQ 993
Query: 653 KQKEIVHKIEAYEKFKRSAVG----------------TALYIHPCLSEISEGDAADRATN 696
Q+++ + F SA ++ HP L ++++ R +
Sbjct: 994 LQRKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQED 1053
Query: 697 -----LTDATVDSLIESIIIKDGVK-------------------AKFFFNIL-------- 724
+ +++ D IE+ + +G K + ++ N+L
Sbjct: 1054 VESFLMDESSSDDNIEN-YLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEA 1112
Query: 725 -------------SLANSAGEKLLAFSQYILPMKFLERLLVK-----RLG--WHVGKEIF 764
S + G+K L FSQ + + +E L K + G W GK+ +
Sbjct: 1113 DYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWY 1172
Query: 765 MISGDTSADDREVAMDQFNNSADAKV--LFGSIKACGEGISLVGASRVIILDVHLNPSVT 822
I G T + +R+ +++FN+ + +V S +A GI+L A+RVI+LD NP+
Sbjct: 1173 RIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHD 1232
Query: 823 RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKE 861
QAI R +R GQ K V+ YRL+A + E K ++ KE
Sbjct: 1233 LQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKE 1271
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 229/516 (44%), Gaps = 67/516 (12%)
Query: 364 HAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLV 423
H + +QL+G +L+ N + ILA G GKT ++ F+ + + +A P +
Sbjct: 530 HCGALYDYQLQGLQWLIDNFKTRR--SVILADEMGLGKTVQVVCFLYHIIKESLTASPAL 587
Query: 424 VL-PKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEAR--MSILFLGYK 480
+L PK IL W++EF +W D+ + + + ++ Q+ + S + + L Y
Sbjct: 588 ILAPKSILLQWEKEFCQW-ASDLNVIVYQGDRDSRKCIQVHEMYSSDGKPLFDALVTSY- 645
Query: 481 QFSRIICGDGDGNIAAACRDRLLMVP---NLLILDEGHTPRNRETDVLASLKRVQTPRKV 537
+F +I D+ ++ + +++DE H + + ++ A LKR + ++
Sbjct: 646 EFVQI--------------DKAVLQKFKWSTIVIDEAHRMKKLDCNLAACLKRYCSEFRL 691
Query: 538 VLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTE 597
+L+GT QN++ E+F++L + P E S P A + S + E
Sbjct: 692 LLTGTPLQNNIMELFSLLHYIDPD----EFSDPKADGLFSPI-----------------E 730
Query: 598 SVEDTLLNDDNFTRKSHVI--RSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQK 655
S D L D+ R +++ R LR + DVL D +P V L+ Q+
Sbjct: 731 SGRD-LTMDEKVARIHNILKPRMLRRMKSDVL-------TDSMPVKKWVEVPCALADSQR 782
Query: 656 EIVHKI--EAYEKFKRSAV--GTALYIHPCLSEISEGDAADRATNLTDATVDSLIESIII 711
E+ I Y K SA+ G L ++ L E+ + + + + S+I
Sbjct: 783 ELYINILERNYSKLN-SAIRNGRKLSLNNILMELRKCCNHPVGLEVGQQATEDVFLSLIA 841
Query: 712 KDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTS 771
G K + +L G ++L FSQ + LE L LG+ + I G TS
Sbjct: 842 SSG-KLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCS-LGYKYAR----IDGQTS 895
Query: 772 ADDREVAMDQFNN-SADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAF 830
R+ +++++ N ++ + S +A G G+ L GA RVII D NP + QA RA
Sbjct: 896 LSARQESIEEYKNIDSETFIFLMSTRAGGMGVDLPGADRVIIYDPDFNPFMDLQAQSRAH 955
Query: 831 RPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKL 866
R GQ + V VY+L+ S E K + + +K I +
Sbjct: 956 RIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENM 991
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 217/531 (40%), Gaps = 93/531 (17%)
Query: 368 MRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPK 427
+ P+QLEG +FL + +K IL G GKT I+F+ S LVV P
Sbjct: 261 LHPYQLEGLNFLRYSWYHNK--RVILGDEMGLGKTIQSIAFLGSLFVDKLGPH-LVVAPL 317
Query: 428 GILGTWKREFQRW--------------QVEDIPLYDFYSVKADKRTEQL-------EVLK 466
L W+REF W E I Y+FY K + + E K
Sbjct: 318 STLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKK 377
Query: 467 SWEARMSILFLGYKQFSRIICGDGD--GNIAAACRDRLLMVPNLLILDEGHTPRNRETDV 524
+ +L Y+ +I D I C +I+DEGH +N+++ +
Sbjct: 378 QSRIKFDVLLTSYE----MINMDSTVLKTIEWEC----------MIVDEGHRLKNKDSKL 423
Query: 525 LASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGI 584
LK T +V+L+GT QN++ E+F ++ FL+ +S IA
Sbjct: 424 FGQLKEYHTKHRVLLTGTPVQNNLDELFMLM-----HFLEGDSFGSIA------------ 466
Query: 585 RSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDILDELPGLVDF 644
E +D +N D K H + L +L +K D++ ELP +
Sbjct: 467 ---------DLQEEFKD--INQDKQVEKLHGM-----LKPHLLRRFKKDVMKELPPKKEL 510
Query: 645 SVFLKLSTKQKEIVHKI--EAYEKFKR------SAVGTALYIHPCLSEISEGDAADRATN 696
+ ++L++KQKE I + YE R S + + + D + N
Sbjct: 511 ILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPAN 570
Query: 697 LTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLG 756
+A + L+ES K + ++ G ++L +SQ+ + LE L R
Sbjct: 571 SEEA-LRRLLES-----SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYR-K 623
Query: 757 WHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDV 815
W + I G +R++ +D+FN + F S +A G GI+L A VII D
Sbjct: 624 WSYER----IDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDS 679
Query: 816 HLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKL 866
NP QA+ RA R GQ KV +YRLV+ + E + + KK V+ L
Sbjct: 680 DWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHL 730
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 211/484 (43%), Gaps = 51/484 (10%)
Query: 398 GSGKTFMLISFIQSFLAKYPSARP-LVVLPKGILGTWKREFQRWQVEDIPLYDFY-SVKA 455
G GKT +F+ S +Y P LV++P + W EF W + + +++ S +A
Sbjct: 3 GLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASW-APHLNVVEYHGSARA 61
Query: 456 DKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGH 515
Q E + ++M + +K + + AA R + +LI+DEGH
Sbjct: 62 RSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRS---VSWEVLIVDEGH 118
Query: 516 TPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRI 575
+N + + + L + +V+L+GT QN++ E++N+L+ ++P +S P
Sbjct: 119 RLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQP------ASFP----- 167
Query: 576 MSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDIL 635
SL ++F E ND T K +++L + +L K D +
Sbjct: 168 ----------SL-----ASFEEK-----FNDLTTTEKVEELKNL--VAPHMLRRLKKDAM 205
Query: 636 DELPGLVDFSVFLKLSTKQKEIVHKI--EAYEKFKRSAVGTA----LYIHPCLSEISEGD 689
+P + V ++L++ Q E + + Y+ + G A L I L ++
Sbjct: 206 QNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHP 265
Query: 690 AADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLER 749
T + + L E + IK K ++L + + G ++L FSQ + LE
Sbjct: 266 YLIPGTEPESGSPEFLHE-MRIKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILED 324
Query: 750 LLVKRLGWHVGKEIF-MISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGAS 808
L W G + F + G S +R+ A+ +FN V S ++CG GI+L A
Sbjct: 325 YLT----WEFGPKTFERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLATAD 380
Query: 809 RVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWF 868
VII D NP QA+ RA R GQ ++ VYRLV S E + A KK ++ +L+
Sbjct: 381 TVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFV 440
Query: 869 EWSE 872
SE
Sbjct: 441 NKSE 444
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 139/593 (23%), Positives = 240/593 (40%), Gaps = 143/593 (24%)
Query: 371 HQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAK-----------YPSA 419
HQ +G FL NL + GG +L G GKT I+F+ + + K A
Sbjct: 135 HQRDGVRFLY-NLYRNNHGG-VLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIA 192
Query: 420 RPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGY 479
L++ P ++ W+ EF W + +Y + D +++E R+ I+ +
Sbjct: 193 PILILCPTSVIRNWENEFAEWARCSVAVY--HGPNRDLVLQKVET-----QRLEIVITSF 245
Query: 480 KQF---SRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRK 536
F +I+CG + +L+++DE H +N ++ + + + T ++
Sbjct: 246 DTFRIHGKILCG---------------ISWDLVVVDEAHRLKNEKSKLYTACLEITTRKR 290
Query: 537 VVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFT 596
L+GT+ QN + E+FN+ D + P L R R + LK H F+
Sbjct: 291 FGLTGTIMQNKIMELFNLFDWIVPGCL---GDREHFRVYYDE-------PLK--HGQRFS 338
Query: 597 ESVEDTLLNDDNFTRKSHVIRSLRELTKDVLHYYKGDILDELP-GLVDFSVFLKLSTKQK 655
+ D RK H++ L +K +L K + + L G D VF ++S QK
Sbjct: 339 APERFVQVAD---KRKKHLVSVL---SKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQK 392
Query: 656 EIVHK----------------------IEAYEKFKRSAVGTAL--YIH------------ 679
+ + + E KR+ + Y+H
Sbjct: 393 RVYRRMLQQPDVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPF 452
Query: 680 ----PCLSEIS---------------EGDAADRATNLTDATVDSLIESIIIKDGVKAKFF 720
PCL ++ E + + L A D+ IE ++ G K++ F
Sbjct: 453 CLVLPCLGKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIE--LVGGGAKSENF 510
Query: 721 FNI---------------LSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFM 765
+ LSL G+K+L FS + + LE+ L+++ G
Sbjct: 511 MGLSDAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRK-----GYCFSR 565
Query: 766 ISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 825
G T + R++ +D+FN +V S +A G++LV A+RV+I D NP+ QA
Sbjct: 566 FDGTTPMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQA 625
Query: 826 IGRAFRPGQQKKVFVYRLVAADS-PEVKFHETAFKKEV--------IPKLWFE 869
R+FR GQ++ V V+RL+ A S E+ + +K+++ I K +FE
Sbjct: 626 QDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSGKIEKRYFE 678
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 232/550 (42%), Gaps = 66/550 (12%)
Query: 338 DADDIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAP 397
D D + G+ ++++ + + I Q+ +Q G +L + L + GG I+
Sbjct: 342 DEDQVTEGSDELTDVTLEGGLRIPGTLYTQLFDYQKVGVQWLWE-LHCQRAGG-IIGDEM 399
Query: 398 GSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRW----QVEDIPLYDFYSV 453
G GKT ++SF+ S +VV P +L W+RE RW +VE + S
Sbjct: 400 GLGKTVQVLSFLGSLHNSGLYKPSIVVCPVTLLQQWRREASRWYPKFKVEILHDSANSSS 459
Query: 454 KADKRTEQLEVLKSWEARMSILFLGYKQ-------FSRIICGDGDGNIAAACRDRLLMVP 506
K KR+ + SW++ K SR++ G G + ++
Sbjct: 460 KKSKRSSDSDSEASWDSDQEEAVTCSKPAKKWDDLISRVVSS-GSGLLLTTYEQLRILGE 518
Query: 507 NLL-------ILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVR 559
LL +LDEGH RN ++ K++QT +++++G QN +SE++++ D V
Sbjct: 519 KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 578
Query: 560 PKFL------KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKS 613
P L + E S PI ++ G ++ T L R +
Sbjct: 579 PGKLGVLPVFEAEFSVPI--------------TVGGYANA--------TPLQVSTAYRCA 616
Query: 614 HVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVG 673
V+R L + +L K D+ +LP + +F L+T+Q+ A + ++ G
Sbjct: 617 VVLRDL--VMPYLLRRMKADVNAQLPKKTEHVLFCSLTTEQRATYRAFLASSEVEQIFDG 674
Query: 674 --TALYIHPCLSEI-SEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSA 730
+LY L +I + D +R + + S K K +L +
Sbjct: 675 NRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGNPERS------GKMKVVEQVLKVWKEQ 728
Query: 731 GEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKV 790
G ++L F+Q + +E L + + G T A R +D+FNN+ + +
Sbjct: 729 GHRVLLFTQTQQMLDIMENFLTA-----CEYQYRRMDGLTPAKQRMALIDEFNNTDEIFI 783
Query: 791 LFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPE 850
+ K G G +L GA+R+II D NPS QA RA+R GQ + V VYRL+ + E
Sbjct: 784 FILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIE 843
Query: 851 VK-FHETAFK 859
K +H +K
Sbjct: 844 EKVYHRQIYK 853
>Os02g0762800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 879
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 137/581 (23%), Positives = 225/581 (38%), Gaps = 100/581 (17%)
Query: 332 YESRSKDADDIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVG----DK 387
++ +D ++ + A+KV + + +RPHQ EG F+ + G D
Sbjct: 210 WQPEGRDKENSNFSAIKVDHLLV-----------RYLRPHQREGVQFMFDCVSGLLNDDG 258
Query: 388 PGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLV-----VLPKGILGTWKREFQRWQV 442
GCILA G GKT I+ + + L + A+P+V V P ++ W+ E +W
Sbjct: 259 ISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLK 318
Query: 443 EDIPLYDFY-SVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDR 501
+ L S +AD + LK +R+ +L + Y+ F +C
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPL-SRLQVLIVSYETFRM---HSSKFERPGSC--- 371
Query: 502 LLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPK 561
+LLI DE H +N +T +L + R+++LSGT QN + E F++++ P
Sbjct: 372 -----DLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPG 426
Query: 562 FLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLRE 621
L RR I G T S E+ L + S +
Sbjct: 427 VL---GDATYFRRYYEAPIICGREP---------TASAEEKNLGSERSAELSAKVNLF-- 472
Query: 622 LTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPC 681
+L + + LP + V KL +A+ TALY H
Sbjct: 473 ----ILRRTNALLSNHLPPKIVEVVCCKL-------------------TALQTALYNHFI 509
Query: 682 LSE-----ISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLA 736
S+ ISEG + A +I D +K+ NS G
Sbjct: 510 HSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSN---------NSGGSGFDD 560
Query: 737 FSQYILPMKFLERL------LVKRLGWHVGKEIFMISGDTSADDREVAMDQFNN-SADAK 789
++ P F R L +L + G TS + R+ ++QFN+ S D
Sbjct: 561 CLRFFPPELFSGRSGFVTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEF 620
Query: 790 VLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSP 849
V S KA G G++LVG +R+I+ D NP+ +Q R Q K + +++ +
Sbjct: 621 VFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQVYQR-----QMSKEGLQKVIQQEQA 675
Query: 850 EVKFHETAFKKEVIPKLWFEWSELCTT---EDFKLNQVDID 887
+ K ++ E + L F + E + E+ K N+ + D
Sbjct: 676 DGKMQGSSLSTEDLRDL-FTFHEQIRSEIHENLKCNRCNKD 715
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 227/526 (43%), Gaps = 86/526 (16%)
Query: 367 QMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYP--SARPLVV 424
+MR +QL G ++L++ L + G ILA G GKT IS + +L ++ + +VV
Sbjct: 284 KMRDYQLAGLNWLIR-LYENGING-ILADEMGLGKTLQTISLL-GYLHEFRGITGPHMVV 340
Query: 425 LPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSR 484
PK LG W +E QR+ P+ ++ L + E R I + +
Sbjct: 341 APKSTLGNWMKEIQRF----CPV-----------LRAIKFLGNPEERNHI------RENL 379
Query: 485 IICGDGDGNIAA---ACRDRLLMVP---NLLILDEGHTPRNRETDVLASLKRVQTPRKVV 538
++ G D + + A +++ + +I+DE H +N + + +++ T +++
Sbjct: 380 LVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLL 439
Query: 539 LSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTES 598
++GT QN++ E++++L+ + P+ I S D F S
Sbjct: 440 ITGTPLQNNLHELWSLLNFLLPE----------------------IFSSAETFDDWFQIS 477
Query: 599 VEDTLLNDDNFTRKSHVIRSLRELTKD-VLHYYKGDILDELPGLVDFSVFLKLSTKQKEI 657
E ND + V++ L ++ + +L K D+ LP + + + +S QK+
Sbjct: 478 GE----ND-----QHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQY 528
Query: 658 --------VHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESI 709
+ + A + KR + A+ + C + A+ T T D LIE
Sbjct: 529 YRALLQKDLEVVNAGGERKR-LLNIAMQLRKCCNHPYLFQGAEPGPPYT--TGDHLIE-- 583
Query: 710 IIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGD 769
+ K +L ++L FSQ + LE L+ + G + I G+
Sbjct: 584 ---NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-----YKGYQYCRIDGN 635
Query: 770 TSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGR 828
T +DR+ +++ FN K +F S +A G GI+L A VI+ D NP V QA R
Sbjct: 636 TGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 695
Query: 829 AFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELC 874
A R GQ+K+V V+R + E K E A+KK + L + L
Sbjct: 696 AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA 741
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 712 KDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTS 771
KD K IL EK + FSQ+ LE ++ G + G S
Sbjct: 495 KDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQK-----GIKFLRFDGKLS 549
Query: 772 ADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFR 831
RE + +F+ S D VL S+KA G G++L AS V ++D NP+V QAI R R
Sbjct: 550 QKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHR 609
Query: 832 PGQQKKVFVYRLVAADSPEVKFHET-AFKKEVI 863
GQ++ V V R + D+ E + + A K+ +I
Sbjct: 610 IGQKRAVQVRRFIVKDTVEERMQKVQACKQRMI 642
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 733 KLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLF 792
++L FSQ + LE L+ R G + I G+T +DR+ +++ FN K +F
Sbjct: 550 RVLIFSQMTRLLDILEDYLMYR-----GYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVF 604
Query: 793 G-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEV 851
S +A G GI+L A V++ D NP QA RA R GQ+K+V V+R + E
Sbjct: 605 LLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEE 664
Query: 852 KFHETAFKKEVIPKLWFEWSELC 874
K E A+KK + L + L
Sbjct: 665 KVIERAYKKLALDALVIQQGRLA 687
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,045,134
Number of extensions: 1345129
Number of successful extensions: 3909
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 3879
Number of HSP's successfully gapped: 22
Length of query: 909
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 799
Effective length of database: 11,292,261
Effective search space: 9022516539
Effective search space used: 9022516539
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)