BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0106900 Os07g0106900|AK108101
(204 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0106900 Plant disease resistance response protein fami... 278 2e-75
Os07g0107100 Plant disease resistance response protein fami... 182 2e-46
Os08g0375400 Plant disease resistance response protein fami... 146 1e-35
Os07g0107500 Plant disease resistance response protein fami... 114 6e-26
Os11g0645300 Plant disease resistance response protein fami... 109 2e-24
Os07g0107300 Plant disease resistance response protein fami... 108 3e-24
Os11g0644750 Plant disease resistance response protein fami... 91 4e-19
Os11g0178800 Plant disease resistance response protein fami... 80 1e-15
Os12g0174700 Plant disease resistance response protein fami... 75 3e-14
Os11g0179000 Plant disease resistance response protein fami... 75 5e-14
Os11g0180000 Plant disease resistance response protein fami... 70 1e-12
Os11g0179100 Plant disease resistance response protein fami... 64 6e-11
Os11g0215100 Plant disease resistance response protein fami... 64 7e-11
Os11g0179700 Plant disease resistance response protein fami... 64 1e-10
>Os07g0106900 Plant disease resistance response protein family protein
Length = 204
Score = 278 bits (711), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/181 (79%), Positives = 143/181 (79%)
Query: 24 GGLPVRLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKP 83
GGLPVRLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFG SKP
Sbjct: 24 GGLPVRLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGDTMVVDDLLTDVDDSKP 83
Query: 84 VGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKL 143
VGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKL
Sbjct: 84 VGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKL 143
Query: 144 RRATGHVLWTTARRESPVHMVLELDVYAWVXXXXXXXXXXXXXXRGTNXXXXXXXXXXSY 203
RRATGHVLWTTARRESPVHMVLELDVYAWV RGTN SY
Sbjct: 144 RRATGHVLWTTARRESPVHMVLELDVYAWVPASSSPARRWSSLLRGTNVVTADVDDADSY 203
Query: 204 F 204
F
Sbjct: 204 F 204
>Os07g0107100 Plant disease resistance response protein family protein
Length = 209
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 109/145 (75%), Gaps = 2/145 (1%)
Query: 28 VRLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVG 85
VRLR+YMHDI GG GQT+V VV G GP +P+M PG++FG S+ VG
Sbjct: 38 VRLRVYMHDIVGGAGQTSVVVVKGPGPANPSMSPGNNFGDTVIIDDVVTEGPSLASREVG 97
Query: 86 RAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRR 145
RAQG+Y LA + PVF+V IT+VLTDGPY GSTILIAGRDD SEEVRELAVVGG+G LRR
Sbjct: 98 RAQGTYMLASMARPVFIVDITVVLTDGPYNGSTILIAGRDDTSEEVRELAVVGGSGMLRR 157
Query: 146 ATGHVLWTTARRESPVHMVLELDVY 170
A+GHVLW TA+ ES +H VLELDV+
Sbjct: 158 ASGHVLWRTAKVESKLHAVLELDVH 182
>Os08g0375400 Plant disease resistance response protein family protein
Length = 207
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 100/151 (66%), Gaps = 5/151 (3%)
Query: 27 PVRLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPV 84
PVR+RLYMHD+ GPGQTA++++ G GP H +MP G FG S V
Sbjct: 46 PVRMRLYMHDVIDGPGQTAIRLIWGAGPPHASMP-GRAFGDTVAVDDLVTEGPSIASAAV 104
Query: 85 GRAQGSYTLACLRAPVFVVSITLVLTD--GPYKGSTILIAGRDDISEEVRELAVVGGTGK 142
GRAQG+Y L+ R V VV+IT+ LT GPY GS ++IAGRD + +E RELAVVGGTG
Sbjct: 105 GRAQGTYMLSSQREAVLVVAITVALTSAGGPYNGSNLVIAGRDRVRDETRELAVVGGTGA 164
Query: 143 LRRATGHVLWTTARRESPVHMVLELDVYAWV 173
LR A G+VLW TA+ S +HM LELDV+A V
Sbjct: 165 LRGAAGYVLWRTAKVWSEIHMALELDVHASV 195
>Os07g0107500 Plant disease resistance response protein family protein
Length = 220
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 25 GLPVRLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSK 82
G+ L L+MHD+ GP TAV VVNGTG + G FG S
Sbjct: 47 GVATHLHLFMHDVLTGPDATAVDVVNGTGRAFD-VAGGLRFGQVVVMDDVLTEGPSRSSP 105
Query: 83 PVGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGK 142
VGR QG Y + + P + + +VLT GPY GST+ I GRD I++ +REL+VVGGTG
Sbjct: 106 RVGRTQGFYVFSDMNVPALLFCMNVVLTAGPYAGSTVTILGRDHITQPLRELSVVGGTGA 165
Query: 143 LRRATGHVLWTTARRESPVHMVLELDVY 170
R ATG+VLW TA + VLELDV+
Sbjct: 166 FRMATGYVLWRTASWQFRADAVLELDVF 193
>Os11g0645300 Plant disease resistance response protein family protein
Length = 170
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 81/144 (56%), Gaps = 12/144 (8%)
Query: 29 RLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKP--VGR 86
L +MHD G TAVQVVNG P SHFG VGR
Sbjct: 34 HLHFFMHDTLTGAAPTAVQVVNG---------PRSHFGDTIVIDDVLTAAASRSSAAVGR 84
Query: 87 AQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRA 146
A+G Y A P +V++ +VLT GP+ GS++ + GRDDI+ VREL+VVGGTG+ R A
Sbjct: 85 AKGQYVWASSGNPELLVTMEVVLTSGPFAGSSVTVVGRDDIAAPVRELSVVGGTGEFRMA 144
Query: 147 TGHVLWTTARRESPVHMVLELDVY 170
+G+VLW T + P + +LELDVY
Sbjct: 145 SGYVLWKTVSLDHP-NAILELDVY 167
>Os07g0107300 Plant disease resistance response protein family protein
Length = 229
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKPVGRAQG 89
L +MHD+ G GQTAVQV+ G + + G S VGRAQG
Sbjct: 32 LHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRAQG 91
Query: 90 SYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRATGH 149
Y ++ L +P ++ + L T G GSTI + G DD + VREL+VVGGTGK R ATG+
Sbjct: 92 FYMMSSLSSPTLMMCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMATGY 151
Query: 150 VLWTTARRESPVHMVLELDVY 170
V+W TA + V ELDVY
Sbjct: 152 VVWKTASMSASTG-VFELDVY 171
>Os11g0644750 Plant disease resistance response protein family protein
Length = 160
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVGRA 87
L YMHD+ G +AVQVV G P FG S +GRA
Sbjct: 32 LHFYMHDVLGA---SAVQVVRG---------PRGMFGNTVVMDDVLTEGPAATSSVLGRA 79
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y +A + +V++ +VL+ GP+ GS++ + GRDD VREL VVGGTG+ R A
Sbjct: 80 QGQYIVASTGSMDLMVTMNVVLSSGPFAGSSVTVVGRDDTGAAVRELTVVGGTGQFRMAR 139
Query: 148 GHVLWTTARRESPVHMVLELDVY 170
G+VLW T R + +LELDVY
Sbjct: 140 GYVLWRTIRPD-----LLELDVY 157
>Os11g0178800 Plant disease resistance response protein family protein
Length = 176
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 29 RLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGS--HFGXXXXXXX--XXXXXXXSKPV 84
+ ++Y HD+ GG TA++V A GS FG S V
Sbjct: 33 KFKVYFHDVVGGTKPTAIRVA------QAASTNGSSTFFGAVVAIDDPLTTDAASSSSEV 86
Query: 85 GRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLR 144
GRAQGSYT A + ++++ V T G +KGST+ I GR+++ VRE+++VGG+GK R
Sbjct: 87 GRAQGSYTFADQKTFGLLMNMNFVFTAGDHKGSTLAIVGRNEVLSAVREMSIVGGSGKFR 146
Query: 145 RATGHV 150
A G+V
Sbjct: 147 MARGYV 152
>Os12g0174700 Plant disease resistance response protein family protein
Length = 184
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX---XXXSKPVGR 86
+++Y HD+ GP TAVQV A S FG S PVGR
Sbjct: 41 IKVYWHDVVSGPSPTAVQVARAATTNSSA----SFFGAVVVIDDPLTSGPDLNASSPVGR 96
Query: 87 AQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRA 146
AQG+Y A ++++ V G Y GST+ I GR+++ VRE+AVVGGTG R A
Sbjct: 97 AQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWA 156
Query: 147 TGH 149
G+
Sbjct: 157 RGY 159
>Os11g0179000 Plant disease resistance response protein family protein
Length = 178
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 29 RLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKPVGRAQ 88
++++Y HD+ GP TA++V + G+ + VGRAQ
Sbjct: 33 KIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPAAAAAGEVVGRAQ 92
Query: 89 GSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRATG 148
G+YT A R ++ + V T G + GS++ I GR+++ VRE++VVGG+GK R A G
Sbjct: 93 GTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMARG 152
Query: 149 H 149
+
Sbjct: 153 Y 153
>Os11g0180000 Plant disease resistance response protein family protein
Length = 185
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVGRA 87
L Y HD P TAV+VV+ P+ P+ S FG SKP+GRA
Sbjct: 44 LHFYFHDKVSKPSPTAVRVVD---PVDPSS--RSFFGMINVMDDPLTEGPEPESKPMGRA 98
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y + F+ ++ LV TDG Y GS + + GR+ ++VRE+ V+GGTG R A
Sbjct: 99 QGLYMGSDQAKLGFLQAMNLVFTDGTYNGSVVTVLGRNCPFDDVREMPVIGGTGAFRFAR 158
Query: 148 GHVLWTT 154
G+ T
Sbjct: 159 GYAQART 165
>Os11g0179100 Plant disease resistance response protein family protein
Length = 177
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 29 RLRLYMHDI-TGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXX---XXXXSKPV 84
+LR++ HD+ +GGP T QV P A G FG S+ V
Sbjct: 30 KLRVFWHDVVSGGPNSTVAQVAEA--PTTNASATG--FGAVVVIDDPLTDGPNLTASRLV 85
Query: 85 GRAQGSYTLACLRAPVFVVSITLVLT-DGPYKGSTILIAGRDDISEEVRELAVVGGTGKL 143
GRAQG Y A A ++++ V DGPY GS++ I G + VRE+ VVGGTG
Sbjct: 86 GRAQGMYVAAGKDALSLMMAMNFVFAGDGPYNGSSLAILGANPAERAVREMPVVGGTGVF 145
Query: 144 RRATGHVLWTT 154
R A G+ TT
Sbjct: 146 RFARGYCQATT 156
>Os11g0215100 Plant disease resistance response protein family protein
Length = 181
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 31 RLYMHDIT------GGPGQTAVQVVNGTGPLHPAMPPG---SHFGXXXXXX---XXXXXX 78
R YMHD GGP TAV+VV G + A PG + FG
Sbjct: 29 RFYMHDTVTASASGGGPAATAVRVVRG---VAAAALPGDAVNRFGDLYAIDDPLTDGADA 85
Query: 79 XXSKPVGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVG 138
S VGRA+G Y + + S T+ T G ++G + + RD I +EVREL VVG
Sbjct: 86 ASSAAVGRARGFYMFSSRTDSALLFSATMEFTAGVHRGGAVSVLARDAILDEVRELPVVG 145
Query: 139 GTGKLRRATGH-VLWTTARRESPVHMVLELDVYAWV 173
G G LR A G+ +L T + + + VL++D+Y V
Sbjct: 146 GAGVLRGAAGYGLLRTHSFNATTNNAVLQIDLYLSV 181
>Os11g0179700 Plant disease resistance response protein family protein
Length = 155
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 81 SKPVGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGT 140
SKPVGRAQG Y + F+ ++ +VLT GPY GS I + G + IS+ +RE+ VVGGT
Sbjct: 41 SKPVGRAQGMYLSSDQVRIGFLQAMNIVLTAGPYNGSVITVLGSNHISDSIREMPVVGGT 100
Query: 141 GKLRRATGHVLWTT 154
R A G+ T
Sbjct: 101 SAFRFARGYAQART 114
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,658,391
Number of extensions: 219465
Number of successful extensions: 462
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 455
Number of HSP's successfully gapped: 16
Length of query: 204
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 108
Effective length of database: 12,023,257
Effective search space: 1298511756
Effective search space used: 1298511756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)