Os07g0107300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant disease resistance response protein family protein.
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Os07g0107300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant disease resistance response protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.21 | 0.622 | 11.3 | -0.568 | 1.85 | -1.02 | 2.06 | -0.212 | 0.1 | 6.82 | 20.1 | 2674 | -- | -- |
| 175.3 | 0.617 | 11.3 | -0.551 | 1.86 | -0.98 | 2.03 | -- | 0.103 | 6.82 | 20.19 | 2667 | -- | -- |
| 186.04 | 0.635 | 11.3 | -0.503 | 1.86 | -1.03 | -- | -0.0976 | 0.0998 | 6.77 | 20.17 | 2673 | -- | -- |
| 186.03 | 0.635 | 11.3 | -0.468 | 1.87 | -1.03 | -- | -- | 0.115 | 6.81 | 20.18 | 2783 | -- | -- |
| 358.06 | 0.881 | 11.3 | -0.434 | -- | -1.01 | -- | 0.0576 | 0.203 | -- | 21.1 | 2090 | -- | -- |
| 195.76 | 0.656 | 11.4 | -1.07 | 1.83 | -- | 2.17 | -- | -0.146 | 6.92 | -- | -- | -- | -- |
| 207.87 | 0.675 | 11.4 | -1.03 | 1.84 | -- | -- | -- | -0.151 | 6.9 | -- | -- | -- | -- |
| 357.79 | 0.881 | 11.3 | -0.496 | -- | -1.03 | -- | -- | 0.175 | -- | 21.11 | 2090 | -- | -- |
| 190.68 | 0.643 | 11.3 | -- | 1.91 | -1.23 | -- | -- | 0.211 | 6.66 | 20 | 3987 | -- | -- |
| 385.57 | 0.918 | 11.4 | -0.988 | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
| 235.67 | 0.718 | 11.3 | -- | 1.83 | -- | -- | -- | -0.0368 | 6.93 | -- | -- | -- | -- |
| 357.32 | 0.88 | 11.3 | -- | -- | -1.09 | -- | -- | 0.267 | -- | 21.47 | 629 | -- | -- |
| 411.31 | 0.947 | 11.4 | -- | -- | -- | -- | -- | -0.00676 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.28 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 2 | 172.36 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 3 | 172.36 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 5 | 172.76 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 17 |
| 6 | 172.91 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 8 | 173.03 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 9 | 173.09 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 10 | 173.13 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 15 | 173.23 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 24 | 173.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 25 | 173.42 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 26 | 173.47 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 27 | 173.50 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 31 | 173.52 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 33 | 173.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 41 | 173.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 47 | 173.70 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 64 | 173.85 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 8 |
| 70 | 173.90 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 72 | 173.92 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 73 | 173.93 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 75 | 173.93 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 92 | 174.02 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 98 | 174.07 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 100 | 174.07 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 9 | 15 |
| 110 | 174.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 113 | 174.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 116 | 174.13 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 136 | 174.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 148 | 174.26 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 9 | 15 |
| 153 | 174.29 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 154 | 174.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 156 | 174.30 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 157 | 174.30 | wind | 7.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 162 | 174.32 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 164 | 174.33 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 172 | 174.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 173 | 174.36 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 184 | 174.38 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 189 | 174.39 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 190 | 174.39 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 203 | 174.44 | temperature | 20.0 | 4320 | < th | dose independent | sin | 19 | NA |
| 223 | 174.51 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 224 | 174.51 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 240 | 174.56 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 241 | 174.56 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 242 | 174.56 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 245 | 174.59 | temperature | 20.0 | 4320 | > th | dose independent | sin | 19 | NA |
| 260 | 174.65 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 275 | 174.68 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 277 | 174.69 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 290 | 174.75 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 295 | 174.76 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 314 | 174.83 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 330 | 174.87 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 18 |
| 338 | 174.92 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 361 | 175.01 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 367 | 175.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 380 | 175.06 | wind | 1.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 382 | 175.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 391 | 175.10 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 392 | 175.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 404 | 175.15 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 408 | 175.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 409 | 175.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 417 | 175.18 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 430 | 175.20 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 431 | 175.21 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 5 |
| 467 | 175.31 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 500 | 175.37 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 518 | 175.41 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 629 | 175.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 634 | 175.66 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 680 | 175.74 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 686 | 175.75 | temperature | 20.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 718 | 175.81 | temperature | 20.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 722 | 175.82 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 728 | 175.82 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 791 | 175.95 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 832 | 176.01 | humidity | 80.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 874 | 176.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 922 | 176.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 931 | 176.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 968 | 176.22 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 989 | 176.25 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |