BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0107300 Os07g0107300|AK106062
(229 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183 119 1e-27
AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190 117 7e-27
AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186 115 1e-26
AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194 105 2e-23
AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188 97 9e-21
AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186 96 1e-20
AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192 95 3e-20
AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187 90 9e-19
AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188 87 5e-18
AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191 87 6e-18
AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187 80 8e-16
AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174 80 8e-16
AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126 79 2e-15
AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272 74 8e-14
AT4G23690.1 | chr4:12339152-12339715 REVERSE LENGTH=188 61 6e-10
AT1G64160.1 | chr1:23814063-23814611 FORWARD LENGTH=183 59 3e-09
AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323 57 9e-09
AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244 52 3e-07
AT4G13580.1 | chr4:7900427-7901161 FORWARD LENGTH=245 51 6e-07
AT3G55230.1 | chr3:20471824-20472744 FORWARD LENGTH=307 50 8e-07
AT1G07730.2 | chr1:2397527-2398696 REVERSE LENGTH=390 50 8e-07
AT2G28670.1 | chr2:12300380-12301723 REVERSE LENGTH=448 49 2e-06
AT4G11180.1 | chr4:6820049-6820606 FORWARD LENGTH=186 47 7e-06
>AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183
Length = 182
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKG-PTSANGGVSTGFGDTTVVDDALTETSSATSPEVGR 88
THLHF+ HDV+SG TAV+V + PT+ ++ FG + DD LTE +S EVGR
Sbjct: 40 THLHFYFHDVISGDKPTAVKVAEARPTTT---LNVKFGVIMIADDPLTEGPDPSSKEVGR 96
Query: 89 AQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMA 148
AQG Y N FTAGE NGSTIAV G +D + VREL ++GGTG FR A
Sbjct: 97 AQGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELPIIGGTGAFRFA 156
Query: 149 TGYVVWKTASMSASTGVFELDVYV 172
GY + KT + V E +V++
Sbjct: 157 RGYALPKTYKIVGLDAVVEYNVFI 180
>AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190
Length = 189
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
THLHF+ HD+VSG T+VQV GPT+ + +TGFG VVDD LT TS EVGRA
Sbjct: 45 THLHFYFHDIVSGDKPTSVQVANGPTTNSS--ATGFGLVAVVDDKLTVGPEITSEEVGRA 102
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y NL FT G+ + ST+A+ G + + VRE+ ++GGTG FR
Sbjct: 103 QGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGR 162
Query: 150 GYVVWKTASMSASTG--VFELDVYV 172
GY + KT + ++G V E +VY+
Sbjct: 163 GYALAKTLVFNITSGDAVVEYNVYI 187
>AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186
Length = 185
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
THLHF+ HDV+SG TAV+V + + + V+ FG + DD LTE +S EVGRA
Sbjct: 43 THLHFYFHDVISGDKPTAVKVAEARRTNSSNVN--FGVIMIADDPLTEGPDPSSKEVGRA 100
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y NL FTAGE NGST+A+ G ++ + VRE+ ++GGTG FR A
Sbjct: 101 QGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFAR 160
Query: 150 GYVVWKTASMSASTGVFELDVYV 172
GY KT + V E +V++
Sbjct: 161 GYAQAKTYKVVGLDAVVEYNVFI 183
>AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194
Length = 193
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
THLHF+ HD++SG T ++V + P + + +T FG +VD +TE +S EVGRA
Sbjct: 51 THLHFYFHDIISGDKPTTIRVAEAPGTNSS--ATVFGAVLIVDAPVTEGPELSSKEVGRA 108
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y N FT GE NGST A+ G + REL ++GGTG FR A
Sbjct: 109 QGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFAR 168
Query: 150 GYVVWKTASMSASTGVFELDVYV 172
GY + KT + V E +V++
Sbjct: 169 GYALPKTYKVVNIDAVVEYNVFI 191
>AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188
Length = 187
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
T+L F+ HD +SG TAV+V +G + T FG +VDDALTET+ S VGRA
Sbjct: 43 TNLQFYFHDTLSGKNPTAVKVAQGTDTEKS--PTLFGAVFMVDDALTETADPKSKLVGRA 100
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y ++ F G STI++IG + +RE+ +VGGTG FRMA
Sbjct: 101 QGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMFRMAR 160
Query: 150 GYVVWKTASMSASTG 164
GY + +T TG
Sbjct: 161 GYAIARTNWFDPKTG 175
>AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186
Length = 185
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
TH + HD+V+G ++V ++ P G +TGFG ++D+ LT T +S VGRA
Sbjct: 40 THFRVYWHDIVTGQDSSSVSIMNPPKKYTG--ATGFGLMRMIDNPLTLTPKLSSKMVGRA 97
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QGFY +N G+ NGSTI V+G + VRE+ V+GG+G FR A
Sbjct: 98 QGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFAR 157
Query: 150 GYVVWKTASMSASTG--VFELDVYV 172
GYV T + TG + E + Y+
Sbjct: 158 GYVQASTHEFNLKTGNAIVEYNCYL 182
>AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192
Length = 191
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
THL + HD+V+G ++++ I+GP A S+ FG T++D+ALT S VG+A
Sbjct: 46 THLRVYWHDIVTGRNPSSIR-IQGPV-AKYSSSSYFGSITMIDNALTLDVPINSTVVGQA 103
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y +NL F G+ NGSTI ++G + + VRE+ VVGG+G FR A
Sbjct: 104 QGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFAR 163
Query: 150 GYVVWKTASMSASTG 164
GYV +T TG
Sbjct: 164 GYVEARTKLFDMKTG 178
>AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187
Length = 186
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
TH + HD++SGS ++V VI P S S+ FG TV+D+ LT + S VG+A
Sbjct: 44 THFRVYWHDILSGSNPSSV-VINPPISN----SSFFGSVTVIDNRLTTEVAVNSTLVGQA 98
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y +N F G+ NGS+IA++G + VRE+ V+GG+G FR A
Sbjct: 99 QGIYAATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFAR 158
Query: 150 GYVVWKTASMSASTG 164
GYV +T +G
Sbjct: 159 GYVEARTMWFDQKSG 173
>AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188
Length = 187
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
TH + HD++SG T++ + P N S+ FG +++D+ALT S +G+A
Sbjct: 45 THFKVYWHDILSGPNPTSIMI--QPPVTN---SSYFGAISMIDNALTAKVPMNSTVLGQA 99
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QGFY +N F G+ NGSTI ++G + + VRE+ +VGG+G FR A
Sbjct: 100 QGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFAR 159
Query: 150 GYVVWKTASMSASTG 164
GYV +T ++ G
Sbjct: 160 GYVEARTKWINLKNG 174
>AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191
Length = 190
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
T + F++HD +SG TAV++ + GFG V+DD LT S E+G
Sbjct: 39 TRVRFYLHDTLSGQNPTAVRIAHANLTGGSASPVGFGSLFVIDDPLTVGPEKHSKEIGNG 98
Query: 90 QGFYXXXXXXXXXXXXCV--NLYFTAGENNGSTIAVIGHDDTTATV--RELSVVGGTGKF 145
QG Y + +L FTAG+ NGS+I++ + V RE+++VGG GKF
Sbjct: 99 QGMYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGGRGKF 158
Query: 146 RMATGYVVWKTASMSASTG 164
RMA G+V KT + TG
Sbjct: 159 RMARGFVKVKTNKIDMKTG 177
>AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187
Length = 186
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANG---GVSTGFGDTTVVDDALTETSSATSPEV 86
T+LHFF HD ++ +A+ + K PT G + FG +DD LT S ++
Sbjct: 37 TNLHFFFHDTLTAPNPSAILIAK-PTHTRGDNDSSPSPFGSLFALDDPLTVGPDPKSEKI 95
Query: 87 GRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFR 146
G A+G Y V+ FT+G+ NGS+IAV + T RE++VVGG G+FR
Sbjct: 96 GNARGMYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREVAVVGGRGRFR 155
Query: 147 MATGYVVWKTASMSASTG 164
MA G T ++ + G
Sbjct: 156 MARGVAQLNTYYVNLTNG 173
>AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174
Length = 173
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 30 THLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRA 89
THL + H+ V+G ++V +I+ P N +S G T++DD LT + VG+A
Sbjct: 43 THLRVYWHNSVNGRNPSSV-MIQQPV-LNSSLS---GSITMMDDPLTFDVPRNATVVGQA 97
Query: 90 QGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMAT 149
QG Y +N FT G+ NGSTI ++G + + VRE+ VVGG+G FR A
Sbjct: 98 QGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSGIFRFAR 157
Query: 150 GYVVWKTASMSASTG 164
GYV +T S G
Sbjct: 158 GYVEARTKSFDLKAG 172
>AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126
Length = 125
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 62 STGFGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTI 121
ST FG T+ D+ALT S VG++QGFY +N F G+ NGSTI
Sbjct: 10 STSFGSITMTDNALTSDVPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTI 69
Query: 122 AVIGHDDTTATVRELSVVGGTGKFRMATGYVVWKTASMSASTG--VFELDVYV 172
++G + + VRE++VVGG+G FR+A GYV +T TG E + YV
Sbjct: 70 TILGRNTVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYV 122
>AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272
Length = 271
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 70 VVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDT 129
+VDD LT TS EVGRAQG + N FT GE +GST+++ G +
Sbjct: 165 LVDDILTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGRNPI 224
Query: 130 TATVRELSVVGGTGKFRMATGYVVWKTASMSASTG--VFELDVYV 172
+ VRE+ ++GGTG FR GY KT + + ++G V + +VY+
Sbjct: 225 FSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 269
>AT4G23690.1 | chr4:12339152-12339715 REVERSE LENGTH=188
Length = 187
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 31 HLHFFMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRAQ 90
H F+ HD++ A S G + FG + D +T + S V RAQ
Sbjct: 42 HFSFYFHDILYDGDNVANATSAAIVSPPGLGNFKFGKFVIFDGPITMDKNYLSKPVARAQ 101
Query: 91 GFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMATG 150
GFY L F + E+ G T+ ++G D R+LSVVGGTG F MA G
Sbjct: 102 GFYFYDMKMDFNSWFSYTLVFNSTEHKG-TLNIMGADLMMEPTRDLSVVGGTGDFFMARG 160
>AT1G64160.1 | chr1:23814063-23814611 FORWARD LENGTH=183
Length = 182
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 35 FMHDVVSGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRAQGFYX 94
+ HD++ G T+ G + FG + DD +T + S V RAQGFY
Sbjct: 41 YYHDIMFGVDDVQNATSAAVTNPPGLGNFKFGKLVIFDDPMTIDKNFQSEPVARAQGFYF 100
Query: 95 XXXXXXXXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMATGYVVW 154
L F + ++ G T+ ++G D R+LSVVGGTG F M+ G V +
Sbjct: 101 YDMKNDYNAWFAYTLVFNSTQHKG-TLNIMGADLMMVQSRDLSVVGGTGDFFMSRGIVTF 159
Query: 155 KT 156
+T
Sbjct: 160 ET 161
>AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323
Length = 322
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 65 FGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGST---- 120
FG TVVDD LTE+ S +GRAQGFY + + + T
Sbjct: 200 FGTITVVDDELTESHELGSAVIGRAQGFYLASSLDGTSQTLSLTVLLHGEHDQHDTLDDA 259
Query: 121 IAVIGHDDTTATVRELSVVGGTGKFRMATGYVVWKT 156
I+ G T + +++V+GGTGKF A GY + +T
Sbjct: 260 ISFFGVHRTASHASQIAVIGGTGKFEHAKGYAIVET 295
>AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244
Length = 243
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 41 SGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXX 100
SG +Q GP G+S GFG TV+DD LT S +G+AQG Y
Sbjct: 109 SGQNLNGIQTQLGPD----GLSLGFGTITVIDDILTSGPDLGSQPLGKAQGVYVASSADG 164
Query: 101 XXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMATGY 151
GE N + G + + LSV GGTG+F+ A G+
Sbjct: 165 STQMMAFTAMLEGGEYN-DNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGF 214
>AT4G13580.1 | chr4:7900427-7901161 FORWARD LENGTH=245
Length = 244
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 41 SGSGQTAVQVIKGPTSANGGVSTGFGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXX 100
SG +Q GP G+S GFG TV+DD +T S +G+AQG Y
Sbjct: 110 SGQNLNGIQTQLGPD----GLSLGFGTITVIDDIITSGPDLGSQPLGKAQGVYVASSADG 165
Query: 101 XXXXXCVNLYFTAGENNGSTIAVIGHDDTTATVRELSVVGGTGKFRMATGY 151
GE N + G + + LSV GGTG+F+ A G+
Sbjct: 166 STQMMAFTAMLEGGEYN-DNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGF 215
>AT3G55230.1 | chr3:20471824-20472744 FORWARD LENGTH=307
Length = 306
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 65 FGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGST---- 120
FG TVVDD LTE S +GRAQGFY + + ++ T
Sbjct: 183 FGSITVVDDELTEGHELGSAIIGRAQGFYLASSLDGTSQTLSLTVLLHEDHDHHDTLDDA 242
Query: 121 IAVIGHDDTTATVRELSVVGGTGKFRMATGYVVWKT 156
I+ G T + ++VVGGTG+F A GY V +T
Sbjct: 243 ISFFGVHRTASHASHIAVVGGTGRFEHAKGYAVVET 278
>AT1G07730.2 | chr1:2397527-2398696 REVERSE LENGTH=390
Length = 389
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 65 FGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVI 124
FG TV+D+ LTE S +G+AQGFY F +G S I+
Sbjct: 268 FGTLTVMDNELTEGHELGSGLLGKAQGFYVASALDGTSQTMAFTAMFESGGYEDS-ISFF 326
Query: 125 GHDDTTATVRELSVVGGTGKFRMATGYVVWKTASMSAST 163
G T A+ L V+GGTGK+ A G+ + KT + S+ T
Sbjct: 327 GVHRTAASESHLGVMGGTGKYVNARGFAIVKTFTGSSGT 365
>AT2G28670.1 | chr2:12300380-12301723 REVERSE LENGTH=448
Length = 447
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 65 FGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVI 124
FG TV+DD LTE S +G+AQG+Y F +G S I+
Sbjct: 326 FGTMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDS-ISFF 384
Query: 125 GHDDTTATVRELSVVGGTGKFRMATGYVVWKTASMSAST 163
G T + + V+GGTGK+ A G+ + KT + S+ T
Sbjct: 385 GVLRTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGT 423
>AT4G11180.1 | chr4:6820049-6820606 FORWARD LENGTH=186
Length = 185
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 65 FGDTTVVDDALTETSSATSPEVGRAQGFYXXXXXXXXXXXXCVNLYFTAGENNGSTIAVI 124
FG+ ++++ +T + S V RAQGFY L F + ++ G+ +
Sbjct: 73 FGELIIINNPVTLDQNYLSKPVARAQGFYFYNMKTNYNAWVAWTLVFNSTKHKGTFTIMD 132
Query: 125 GHDDTTATVRELSVVGGTGKFRMATGYVVWKT 156
+ R+LS+VGGTG F M G +KT
Sbjct: 133 ANPFGLQPARDLSIVGGTGDFLMTRGIATFKT 164
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.127 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,341,980
Number of extensions: 115260
Number of successful extensions: 236
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 25
Length of query: 229
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 134
Effective length of database: 8,502,049
Effective search space: 1139274566
Effective search space used: 1139274566
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 110 (47.0 bits)