Os11g0179100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant disease resistance response protein family protein.
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Os11g0179100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant disease resistance response protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.87 | 0.47 | 6.74 | 0.792 | 1.42 | -1.84 | 0.000309 | -0.33 | -0.135 | 9.85 | 9.247 | 285 | -- | -- |
| 99.96 | 0.466 | 6.74 | 0.82 | 1.42 | -1.82 | -0.0127 | -- | -0.128 | 9.82 | 8.385 | 288 | -- | -- |
| 99.87 | 0.465 | 6.74 | 0.793 | 1.42 | -1.84 | -- | -0.328 | -0.135 | 9.85 | 9.085 | 287 | -- | -- |
| 99.95 | 0.466 | 6.73 | 0.844 | 1.42 | -1.85 | -- | -- | -0.122 | 9.85 | 10.92 | 287 | -- | -- |
| 175 | 0.616 | 6.74 | 1.1 | -- | -2.69 | -- | -0.00055 | 0.0296 | -- | 4.436 | 633 | -- | -- |
| 135.68 | 0.546 | 6.79 | 0.435 | 1.64 | -- | 0.333 | -- | -0.385 | 8.61 | -- | -- | -- | -- |
| 136.04 | 0.546 | 6.79 | 0.446 | 1.64 | -- | -- | -- | -0.385 | 8.63 | -- | -- | -- | -- |
| 171.75 | 0.61 | 6.74 | 0.968 | -- | -2.11 | -- | -- | 0.0267 | -- | 20.43 | 673 | -- | -- |
| 116.75 | 0.503 | 6.76 | -- | 1.45 | -1.44 | -- | -- | -0.264 | 9.51 | 9.601 | 289 | -- | -- |
| 286.93 | 0.792 | 6.83 | 0.451 | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
| 141.29 | 0.556 | 6.8 | -- | 1.64 | -- | -- | -- | -0.435 | 8.61 | -- | -- | -- | -- |
| 191.69 | 0.645 | 6.81 | -- | -- | -1.85 | -- | -- | -0.269 | -- | 24.1 | 654 | -- | -- |
| 292.3 | 0.798 | 6.84 | -- | -- | -- | -- | -- | -0.421 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.18 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 12 | 96.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 13 | 96.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 18 | 96.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 21 | 96.92 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 22 | 96.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 25 | 97.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 59 | 99.38 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 75 | 99.81 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 84 | 99.95 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 98 | 100.45 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 107 | 100.67 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 110 | 100.81 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 130 | 101.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 134 | 101.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 139 | 101.61 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 146 | 101.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 155 | 101.85 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 167 | 102.02 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 169 | 102.03 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 209 | 102.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 223 | 102.75 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 238 | 102.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 245 | 103.02 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 298 | 103.38 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 315 | 103.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 321 | 103.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 322 | 103.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 325 | 103.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 22 | 5 |
| 346 | 103.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 366 | 103.66 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 392 | 103.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 443 | 103.98 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 461 | 104.07 | temperature | 10.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 470 | 104.11 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 495 | 104.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 528 | 104.29 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 538 | 104.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 561 | 104.40 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 596 | 104.54 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 712 | 104.80 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 12 |
| 763 | 104.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 808 | 105.02 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 850 | 105.12 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 884 | 105.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 16 |
| 901 | 105.21 | wind | 5.0 | 43200 | > th | dose independent | sin | 17 | NA |