Os11g0645300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant disease resistance response protein family protein.
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Os11g0645300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant disease resistance response protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.63 | 0.549 | 6.72 | -0.719 | 1.37 | -1.06 | 0.0223 | 0.615 | -0.684 | 10.9 | 21.87 | 888 | -- | -- |
| 137.62 | 0.546 | 6.74 | -0.89 | 1.37 | -1.08 | -0.108 | -- | -0.731 | 10.9 | 21.81 | 905 | -- | -- |
| 136.63 | 0.544 | 6.72 | -0.721 | 1.37 | -1.06 | -- | 0.604 | -0.685 | 10.9 | 21.88 | 893 | -- | -- |
| 137.7 | 0.547 | 6.74 | -0.9 | 1.37 | -1.08 | -- | -- | -0.726 | 10.9 | 21.82 | 896 | -- | -- |
| 246.61 | 0.731 | 6.75 | -0.639 | -- | -1.44 | -- | 0.485 | -0.592 | -- | 21.9 | 861 | -- | -- |
| 181.55 | 0.632 | 6.81 | -1.29 | 1.57 | -- | -0.175 | -- | -1.06 | 10.9 | -- | -- | -- | -- |
| 181.68 | 0.631 | 6.81 | -1.29 | 1.57 | -- | -- | -- | -1.06 | 10.9 | -- | -- | -- | -- |
| 247.26 | 0.732 | 6.75 | -0.79 | -- | -1.47 | -- | -- | -0.614 | -- | 21.9 | 862 | -- | -- |
| 155.76 | 0.581 | 6.71 | -- | 1.37 | -1.35 | -- | -- | -0.578 | 10.8 | 21.6 | 1011 | -- | -- |
| 334.86 | 0.855 | 6.85 | -1.33 | -- | -- | -- | -- | -1.07 | -- | -- | -- | -- | -- |
| 225.73 | 0.703 | 6.78 | -- | 1.58 | -- | -- | -- | -0.916 | 10.9 | -- | -- | -- | -- |
| 261.93 | 0.754 | 6.72 | -- | -- | -1.67 | -- | -- | -0.487 | -- | 21.74 | 871 | -- | -- |
| 381.24 | 0.911 | 6.82 | -- | -- | -- | -- | -- | -0.924 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 5 | 135.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 6 | 135.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 9 | 135.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 19 | 135.94 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 22 | 136.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 66 | 137.24 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 96 | 137.71 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 97 | 137.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 101 | 137.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 121 | 138.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 122 | 138.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 152 | 138.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 204 | 139.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 237 | 139.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 304 | 140.75 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 359 | 141.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 13 |
| 422 | 142.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 450 | 142.71 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 457 | 142.79 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 20 |
| 463 | 142.82 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 478 | 142.99 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 480 | 143.01 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 15 |
| 494 | 143.12 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 502 | 143.23 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 505 | 143.26 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 519 | 143.39 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 529 | 143.46 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 537 | 143.55 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 550 | 143.64 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 17 |
| 561 | 143.70 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 569 | 143.76 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 720 | 144.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 764 | 145.17 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 22 |
| 828 | 145.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 842 | 145.60 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 862 | 145.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 926 | 145.93 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |