Os11g0179700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant disease resistance response protein family protein.
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Os11g0179700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant disease resistance response protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 292.03 | 0.803 | 4.06 | -0.66 | 0.488 | -0.692 | 1.34 | 0.301 | -0.666 | 8.75 | 9.418 | 275 | -- | -- |
| 292.24 | 0.796 | 4.06 | -0.658 | 0.494 | -0.723 | 1.26 | -- | -0.667 | 8.35 | 9.41 | 275 | -- | -- |
| 297.25 | 0.803 | 4.07 | -0.633 | 0.497 | -0.591 | -- | 0.135 | -0.67 | 9.54 | 9.379 | 276 | -- | -- |
| 296.89 | 0.803 | 4.06 | -0.626 | 0.501 | -0.593 | -- | -- | -0.66 | 9.57 | 9.38 | 271 | -- | -- |
| 307.38 | 0.817 | 4.09 | -0.632 | -- | -0.719 | -- | -0.302 | -0.641 | -- | 9.572 | 229 | -- | -- |
| 301.11 | 0.814 | 4.06 | -0.675 | 0.905 | -- | 0.498 | -- | -0.646 | 11.9 | -- | -- | -- | -- |
| 302.14 | 0.814 | 4.05 | -0.654 | 0.904 | -- | -- | -- | -0.643 | 12.1 | -- | -- | -- | -- |
| 303.65 | 0.812 | 4.07 | -0.629 | -- | -0.754 | -- | -- | -0.656 | -- | 9.413 | 146 | -- | -- |
| 307.23 | 0.816 | 4.05 | -- | 0.527 | -0.616 | -- | -- | -0.598 | 9.49 | 9.35 | 287 | -- | -- |
| 353.59 | 0.879 | 4.07 | -0.683 | -- | -- | -- | -- | -0.656 | -- | -- | -- | -- | -- |
| 313.41 | 0.828 | 4.04 | -- | 0.913 | -- | -- | -- | -0.57 | 12.1 | -- | -- | -- | -- |
| 314.06 | 0.825 | 4.07 | -- | -- | -0.79 | -- | -- | -0.597 | -- | 9.96 | 156 | -- | -- |
| 365.89 | 0.893 | 4.06 | -- | -- | -- | -- | -- | -0.58 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 279.18 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 15 | 281.62 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 3 |
| 23 | 283.23 | radiation | 10.0 | 270 | < th | dose independent | sin | 8 | NA |
| 49 | 285.32 | radiation | 10.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 64 | 286.16 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 22 | 13 |
| 74 | 286.46 | radiation | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 78 | 286.56 | wind | 1.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 79 | 286.58 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 82 | 286.70 | humidity | 70.0 | 30 | > th | dose independent | sin | 7 | NA |
| 86 | 286.76 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 97 | 287.03 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 104 | 287.11 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 119 | 287.39 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 120 | 287.39 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 128 | 287.55 | radiation | 10.0 | 720 | < th | dose independent | rect. | 19 | 13 |
| 132 | 287.57 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 133 | 287.60 | humidity | 70.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 134 | 287.61 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 138 | 287.65 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 147 | 287.74 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 151 | 287.77 | wind | 3.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 157 | 287.85 | radiation | 40.0 | 90 | < th | dose independent | sin | 9 | NA |
| 160 | 287.86 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 161 | 287.86 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 168 | 287.89 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 172 | 287.93 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 174 | 287.93 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 179 | 287.96 | wind | 3.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 191 | 288.02 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 192 | 288.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 195 | 288.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 199 | 288.02 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 204 | 288.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 205 | 288.02 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 206 | 288.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 209 | 288.03 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 224 | 288.10 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 228 | 288.11 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 230 | 288.13 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 9 | 2 |
| 233 | 288.14 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 2 |
| 235 | 288.15 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 242 | 288.16 | radiation | 40.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 245 | 288.18 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 250 | 288.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 251 | 288.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 256 | 288.23 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 279 | 288.28 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 283 | 288.30 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 319 | 288.41 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 323 | 288.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 334 | 288.50 | radiation | 10.0 | 270 | < th | dose independent | rect. | 21 | 21 |
| 338 | 288.52 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 339 | 288.52 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 348 | 288.57 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 9 | 2 |
| 350 | 288.58 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 353 | 288.59 | radiation | 20.0 | 90 | > th | dose independent | rect. | 16 | 20 |
| 354 | 288.59 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 356 | 288.59 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 381 | 288.63 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 385 | 288.64 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 387 | 288.65 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 390 | 288.65 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 7 |
| 392 | 288.66 | humidity | 70.0 | 30 | < th | dose independent | sin | 6 | NA |
| 398 | 288.69 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 6 |
| 399 | 288.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 405 | 288.70 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 423 | 288.73 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 440 | 288.77 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 7 | 5 |
| 441 | 288.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 458 | 288.80 | radiation | 40.0 | 90 | > th | dose independent | rect. | 9 | 2 |
| 459 | 288.80 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 6 |
| 515 | 288.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 517 | 288.86 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 14 |
| 519 | 288.87 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 521 | 288.87 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 9 | 2 |
| 526 | 288.89 | radiation | 1.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 530 | 288.89 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 557 | 288.90 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 579 | 288.91 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 10 |
| 585 | 288.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 598 | 288.93 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 22 | 10 |
| 631 | 288.97 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 14 |
| 639 | 288.99 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 20 | 1 |
| 673 | 289.01 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 692 | 289.02 | radiation | 1.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 709 | 289.05 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 739 | 289.05 | wind | 5.0 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 788 | 289.09 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 16 | 20 |
| 792 | 289.10 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 797 | 289.10 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 843 | 289.16 | temperature | 20.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 849 | 289.16 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 7 | 4 |
| 859 | 289.18 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 9 |
| 890 | 289.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 891 | 289.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 894 | 289.21 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 898 | 289.21 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 900 | 289.21 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 908 | 289.21 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 961 | 289.26 | radiation | 20.0 | 30 | > th | dose independent | rect. | 9 | 3 |
| 969 | 289.27 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 8 |