BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0726800 Os06g0726800|AK070518
(419 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0726800 G2/mitotic-specific cyclin 2 (B-like cyclin) (... 840 0.0
Os04g0563700 Cyclin 469 e-132
Os05g0493500 Similar to B-type cyclin (Fragment) 273 1e-73
Os01g0281200 Similar to Type B-like cyclin (Fragment) 264 9e-71
Os01g0805600 Similar to Cyclin IaZm (Fragment) 256 3e-68
Os12g0502300 Similar to Cyclin A-like protein (Fragment) 202 5e-52
Os01g0233500 Cyclin 192 3e-49
Os03g0607600 Similar to Cyclin 164 8e-41
Os12g0581800 Cyclin-like domain containing protein 164 1e-40
Os01g0233100 Cyclin-like domain containing protein 143 2e-34
Os12g0298950 Similar to Cyclin 138 9e-33
Os03g0208700 134 2e-31
Os05g0237100 Similar to Type A-like cyclin 132 4e-31
Os03g0208800 130 1e-30
Os03g0225200 Cyclin-like domain containing protein 87 3e-17
Os02g0607000 81 2e-15
Os02g0604800 70 3e-12
Os02g0605000 Cyclin-like domain containing protein 70 4e-12
Os02g0607400 67 2e-11
Os03g0203800 Cyclin-like domain containing protein 65 7e-11
>Os06g0726800 G2/mitotic-specific cyclin 2 (B-like cyclin) (CycOs2)
Length = 419
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/419 (96%), Positives = 404/419 (96%)
Query: 1 MENMRSENFNQGVSMEGVKHAPEMANTNRRALRDIKNIIGAPHQHMAVSKRGLLDKPAAK 60
MENMRSENFNQGVSMEGVKHAPEMANTNRRALRDIKNIIGAPHQHMAVSKRGLLDKPAAK
Sbjct: 1 MENMRSENFNQGVSMEGVKHAPEMANTNRRALRDIKNIIGAPHQHMAVSKRGLLDKPAAK 60
Query: 61 NQAGHRPMTRKFAATLANQPSSAPLAPIGSERQKRTADSAFHGPADMECTKITSDDLPLP 120
NQAGHRPMTRKFAATLANQPSSAPLAPIGSERQKRTADSAFHGPADMECTKITSDDLPLP
Sbjct: 61 NQAGHRPMTRKFAATLANQPSSAPLAPIGSERQKRTADSAFHGPADMECTKITSDDLPLP 120
Query: 121 MMSEMDEVMGSELKXXXXXXXXXXXXXXXSCDANNSLAVVEYVDEIYSFYRRSEGLSCVS 180
MMSEMDEVMGSELK SCDANNSLAVVEYVDEIYSFYRRSEGLSCVS
Sbjct: 121 MMSEMDEVMGSELKEIEMEDIEEAAPDIDSCDANNSLAVVEYVDEIYSFYRRSEGLSCVS 180
Query: 181 PNYMLSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLV 240
PNYMLSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLV
Sbjct: 181 PNYMLSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLV 240
Query: 241 GVTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMR 300
GVTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMR
Sbjct: 241 GVTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMR 300
Query: 301 RFLKAAQSDKKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCE 360
RFLKAAQSDKKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCE
Sbjct: 301 RFLKAAQSDKKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCE 360
Query: 361 LHTKYSEEQLMECSKMMVELHQKAGHGKLTGVHRKYSTFRYGCAAKSEPAVFLLKSVAL 419
LHTKYSEEQLMECSKMMVELHQKAGHGKLTGVHRKYSTFRYGCAAKSEPAVFLLKSVAL
Sbjct: 361 LHTKYSEEQLMECSKMMVELHQKAGHGKLTGVHRKYSTFRYGCAAKSEPAVFLLKSVAL 419
>Os04g0563700 Cyclin
Length = 420
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/403 (58%), Positives = 295/403 (73%), Gaps = 29/403 (7%)
Query: 28 NRRALRDIKNIIGAPHQHMAVSKRGLLDKPAAKNQ-----AGHRPMTRKFAATLA----- 77
NRR LRDI N++GAP A++K+ +L+K + Q HRPMTR FAA+L
Sbjct: 25 NRRPLRDINNLVGAPPHPSAIAKKPMLEKSGKEEQKPALVVSHRPMTRNFAASLTRKEQL 84
Query: 78 -NQPSSAPLAPIGSERQKRTADSAFHGPADMECTKITSDD-LPLPMMSEMDEVMGSELKX 135
+Q S A A + ++ QK G D + S+D + + ++ DE
Sbjct: 85 DHQVSVADAAVVCTDPQKNPIPD---GTVDDDVESCESNDYIAVDECNDTDE-------- 133
Query: 136 XXXXXXXXXXXXXXSCDANNSLAVVEYVDEIYSFYRRSEGLSCVSPNYMLSQNDINEKMR 195
S D+ N LA EYV+E+Y FYR +E +SCV P+YM SQ DINEKMR
Sbjct: 134 ------DESMMDIDSADSGNPLAATEYVEELYKFYRENEEMSCVQPDYMSSQGDINEKMR 187
Query: 196 GILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVS 255
ILIDWLIEVH+K EL+DETLFLTVNI+DRFL ++ V RKKLQLVGVTAMLLACKYEEV+
Sbjct: 188 AILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKLQLVGVTAMLLACKYEEVA 247
Query: 256 VPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELM 315
VPVVEDL+LI DRAYT+ ILEME++I+NTLQF+MSVPTPY FMRRFLKAAQSDK+L+L+
Sbjct: 248 VPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLL 307
Query: 316 SFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSK 375
SFFI+ELSLVEY+MLK++PS+LAAAA+YTAQC + + W K CELH++Y+ EQL+ECS+
Sbjct: 308 SFFILELSLVEYQMLKYRPSLLAAAAVYTAQCALTRCQQWTKTCELHSRYTGEQLLECSR 367
Query: 376 MMVELHQKAGHGKLTGVHRKYSTFRYGCAAKSEPAVFLLKSVA 418
MMV+ HQKAG GKLTGVHRKYSTF++GCAAK+EPA+FLL+S A
Sbjct: 368 MMVDFHQKAGAGKLTGVHRKYSTFKFGCAAKTEPALFLLESGA 410
>Os05g0493500 Similar to B-type cyclin (Fragment)
Length = 449
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 185/262 (70%), Gaps = 1/262 (0%)
Query: 152 DANNSLAVVEYVDEIYSFYRRSEGLSCVSPNYMLSQNDINEKMRGILIDWLIEVHYKLEL 211
D +N LAVVEY+++IY+FYR ++ L +YM SQ ++N KMR IL DW+I+VHYK EL
Sbjct: 188 DGDNQLAVVEYIEDIYNFYRTAQ-LERRPTDYMSSQVEVNPKMRAILADWIIDVHYKFEL 246
Query: 212 LDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAYT 271
+ ETL+LT+ +IDR+L+ + V+R++LQLVGV AML+A KYEE+ P V+DLI +CD AY+
Sbjct: 247 MPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYS 306
Query: 272 RTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELMSFFIIELSLVEYEMLK 331
R IL ME+ I+N LQ++++VPTPY F+ RF+KAA DK+LE M FF E++L EY M
Sbjct: 307 RQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKELENMVFFFSEMALKEYGMAS 366
Query: 332 FQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSKMMVELHQKAGHGKLTG 391
PS++AA+A+Y AQCT+ W + HT ++E QL EC+K++V H A KL
Sbjct: 367 LCPSLVAASAVYAAQCTLKRSPLWTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLKT 426
Query: 392 VHRKYSTFRYGCAAKSEPAVFL 413
+RKY++ + G + PAV L
Sbjct: 427 AYRKYASEQLGRVSLRPPAVCL 448
>Os01g0281200 Similar to Type B-like cyclin (Fragment)
Length = 423
Score = 264 bits (674), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/265 (49%), Positives = 190/265 (71%)
Query: 150 SCDANNSLAVVEYVDEIYSFYRRSEGLSCVSPNYMLSQNDINEKMRGILIDWLIEVHYKL 209
+ D++N LAVV+YV++IY FYR +E YM+SQ +INE+MR IL DWLIEVHY+L
Sbjct: 151 ASDSHNELAVVDYVEDIYRFYRNTENTYRPLCTYMVSQTEINERMRAILTDWLIEVHYRL 210
Query: 210 ELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRA 269
L+ ETL+LTV IID++L+ ENV RK+LQLVGV+AML+ACKYEE P+V+D ++I D +
Sbjct: 211 MLMPETLYLTVYIIDQYLSLENVPRKELQLVGVSAMLIACKYEETWAPLVKDFLVISDNS 270
Query: 270 YTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELMSFFIIELSLVEYEM 329
++R +L E+ I+N LQ++++VPT Y F+ R+LKAA D++LE M+FF EL+LV+Y M
Sbjct: 271 FSRQQVLSTEKSILNKLQWNLTVPTMYMFILRYLKAALGDEELEHMTFFYAELALVQYSM 330
Query: 330 LKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSKMMVELHQKAGHGKL 389
L F PS++AAAA+Y A+CT+ W+ E HT +E QL+EC++ +V LH A +
Sbjct: 331 LFFAPSVIAAAAVYAARCTLGLSPLWSDLLEYHTGLAEPQLLECARRLVSLHAAAPESRQ 390
Query: 390 TGVHRKYSTFRYGCAAKSEPAVFLL 414
V++KY++ + G + PA LL
Sbjct: 391 KVVYKKYASPKLGAVSLHSPAKKLL 415
>Os01g0805600 Similar to Cyclin IaZm (Fragment)
Length = 328
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/269 (46%), Positives = 186/269 (69%), Gaps = 6/269 (2%)
Query: 152 DANNSLAVVEYVDEIYSFYRRSEGLSCVSPNYMLSQNDINEKMRGILIDWLIEVHYKLEL 211
D +N LAVV+Y+++IY FY+ +E C +Y+ +Q +IN KMR IL DW+IEVH+K EL
Sbjct: 61 DGDNELAVVDYIEDIYKFYKVAEN-ECRPCDYIDTQVEINSKMRAILADWIIEVHHKFEL 119
Query: 212 LDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAYT 271
+ ETL+L++ +IDR+L+ + V R++LQLVGV+AML+ACKYEE+ P V D ILI D AYT
Sbjct: 120 MPETLYLSMYVIDRYLSMQQVQRRELQLVGVSAMLIACKYEEIWAPEVNDFILISDSAYT 179
Query: 272 RTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAA-----QSDKKLELMSFFIIELSLVE 326
R IL ME+ I+N LQ++++VPT Y F+ R+LKA +SDK++E M+FF EL+L++
Sbjct: 180 REQILAMEKGILNKLQWNLTVPTAYVFIMRYLKAGASADNKSDKEMEHMAFFFAELALMQ 239
Query: 327 YEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSKMMVELHQKAGH 386
Y ++ PS +AA+A+Y A+ T+ W + HT ++E QL++ +K++V H A
Sbjct: 240 YGLVASLPSKVAASAVYAARLTLKKSPLWTDTLKHHTGFTESQLLDSAKLLVTSHSTAPE 299
Query: 387 GKLTGVHRKYSTFRYGCAAKSEPAVFLLK 415
KL V++KYS+ + G A PAV L K
Sbjct: 300 SKLRVVYKKYSSEQLGGVALRSPAVELCK 328
>Os12g0502300 Similar to Cyclin A-like protein (Fragment)
Length = 490
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 159/261 (60%), Gaps = 7/261 (2%)
Query: 152 DANNSLAVVEYVDEIYSFYRRSEGLSCVSPNYMLS-QNDINEKMRGILIDWLIEVHYKLE 210
D N Y EIY+ SE + NYM + Q DI + MRGILIDWL+EV + +
Sbjct: 217 DNGNPQMCASYASEIYTNLMASELIRRPRSNYMEALQRDITKGMRGILIDWLVEVSEEYK 276
Query: 211 LLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAY 270
L+ +TL+LT+N+IDRFL++ + R+KLQL+G+T+ML+A KYEE+ P VE+ I D Y
Sbjct: 277 LVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYEEICAPRVEEFCFITDNTY 336
Query: 271 TRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKK-----LELMSFFIIELSLV 325
T+ ++L+ME +++N + F +SVPT F+RRFL+AAQ+ + L ++ ++ EL+L+
Sbjct: 337 TKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLAELTLI 396
Query: 326 EYEMLKFQPSMLAAAAIYTAQCTINGFK-SWNKCCELHTKYSEEQLMECSKMMVELHQKA 384
+Y LKF PS++AA+A++ A+ T++ WN E +T Y + C + EL
Sbjct: 397 DYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRELQHNT 456
Query: 385 GHGKLTGVHRKYSTFRYGCAA 405
+ L + KY ++ C A
Sbjct: 457 SNCPLNAIREKYRQQKFECVA 477
>Os01g0233500 Cyclin
Length = 508
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 157/267 (58%), Gaps = 11/267 (4%)
Query: 151 CDANNSLA----VVEYVDEIYSFYRRSEGLSCVSPNYMLS-QNDINEKMRGILIDWLIEV 205
CD +N+ +IY R +E S ++M + Q D+N MR ILIDWL+EV
Sbjct: 225 CDVDNNYEDPQLCATLASDIYMHLREAETRKRPSTDFMETIQKDVNPSMRAILIDWLVEV 284
Query: 206 HYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILI 265
+ L+ +TL+LTVN IDR+L+ + R++LQL+GV ML+A KYEE+ P VE+ I
Sbjct: 285 AEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYI 344
Query: 266 CDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQ-SDKK----LELMSFFII 320
D Y R ++LEME ++N L+F+++ PT CF+RRF++ AQ SD+ LE ++ ++
Sbjct: 345 TDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVA 404
Query: 321 ELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFK-SWNKCCELHTKYSEEQLMECSKMMVE 379
ELSL+EY +L + PS++AA+AI+ A+ + K WN +T+Y +L +C K +
Sbjct: 405 ELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHR 464
Query: 380 LHQKAGHGKLTGVHRKYSTFRYGCAAK 406
L L + KY+ +Y AK
Sbjct: 465 LFSVGPGSNLPAIREKYTQHKYKFVAK 491
>Os03g0607600 Similar to Cyclin
Length = 395
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 156/259 (60%), Gaps = 9/259 (3%)
Query: 162 YVDEIYSFYRRSEGLSCVSP--NYMLS-QNDINEKMRGILIDWLIEVHYKLELLDETLFL 218
Y +I S+ R E + P +Y+ + Q D+ MRGIL+DWL+EV + +L+ +TL+L
Sbjct: 103 YASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTLYL 162
Query: 219 TVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEM 278
TV+ IDRFL+ +++ R+KLQL+GV+AML+A KYEE+S P VED I D Y + ++++M
Sbjct: 163 TVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMKQEVVKM 222
Query: 279 ERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKK-----LELMSFFIIELSLVEYEMLKFQ 333
ER I+N L+F+M PT F+R F++++Q D K LE M ++ ELSL+EY ++
Sbjct: 223 ERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLL 282
Query: 334 PSMLAAAAIYTAQCTING-FKSWNKCCELHTKYSEEQLMECSKMMVELHQKAGHGKLTGV 392
PS++AA+ ++ A+ T++ W+K + T Y +L +C + +L L +
Sbjct: 283 PSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSLMAI 342
Query: 393 HRKYSTFRYGCAAKSEPAV 411
KY R+ + P V
Sbjct: 343 RDKYKQHRFKGVSTLLPPV 361
>Os12g0581800 Cyclin-like domain containing protein
Length = 385
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 155/260 (59%), Gaps = 9/260 (3%)
Query: 161 EYVDEIYSFYR--RSEGLSCVSPNYMLS-QNDINEKMRGILIDWLIEVHYKLELLDETLF 217
+Y +IY++ R E + +Y+ + Q D+ MR IL+DWL+EV + +L+ +TL+
Sbjct: 114 QYASDIYTYLRSMEVEARRQSAADYIEAVQVDVTANMRAILVDWLVEVADEYKLVADTLY 173
Query: 218 LTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILE 277
L V+ +DR+L+ + R +LQL+GV AML+A KYEE+S P VED I D YTR ++++
Sbjct: 174 LAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEEISPPHVEDFCYITDNTYTRQEVVK 233
Query: 278 MERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKK-----LELMSFFIIELSLVEYEMLKF 332
ME I+ L+F+M PT F+RRF ++ Q DKK LE M ++ ELSL++Y L+F
Sbjct: 234 MESDILKLLEFEMGNPTIKTFLRRFTRSCQEDKKRSSLLLEFMGSYLAELSLLDYGCLRF 293
Query: 333 QPSMLAAAAIYTAQCTINGFKS-WNKCCELHTKYSEEQLMECSKMMVELHQKAGHGKLTG 391
PS++AA+ ++ A+ I+ + + W+K + T Y +L +C + +L + LT
Sbjct: 294 LPSVVAASVVFVAKLNIDPYTNPWSKKMQKLTGYKVSELKDCILAIHDLQLRKKCSNLTA 353
Query: 392 VHRKYSTFRYGCAAKSEPAV 411
+ KY ++ C + P V
Sbjct: 354 IRDKYKQHKFKCVSTLLPPV 373
>Os01g0233100 Cyclin-like domain containing protein
Length = 634
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 126/230 (54%), Gaps = 21/230 (9%)
Query: 187 QNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAML 246
Q D+N MR ILIDWL+EV + L+ +TL+LTVN IDR+L+ + R++LQL+GV ML
Sbjct: 371 QKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACML 430
Query: 247 LACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAA 306
+A KYEE+ P VE+ I D Y R + E N+L + RRF++ A
Sbjct: 431 IAAKYEEICAPQVEEFCYITDNTYFRDECWN-ESNSNNSL---------IAYNRRFVRVA 480
Query: 307 Q-SDK---------KLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFK-SW 355
Q SD+ LE ++ ++ ELSL+EY +L + PS++AA+AI+ A+ + K W
Sbjct: 481 QVSDELFIVQDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPW 540
Query: 356 NKCCELHTKYSEEQLMECSKMMVELHQKAGHGKLTGVHRKYSTFRYGCAA 405
N +T+Y +L +C K + L L + KY+ + AA
Sbjct: 541 NSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKILHAA 590
>Os12g0298950 Similar to Cyclin
Length = 391
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 38/262 (14%)
Query: 151 CDANNSLA----VVEYVDEIYSFYRRSEGLSCVSPNYMLS-QNDINEKMRGILIDWLIEV 205
CD +N+ +IY R +E S ++M + Q D+N MR ILIDWL+EV
Sbjct: 145 CDVDNNYEDPQLCATLASDIYMHLREAETRKHPSTDFMETLQKDVNPSMRAILIDWLVEV 204
Query: 206 HYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILI 265
+ L+ +TL+LTVN IDR+L+ + R++LQL+GV ML+A KY+E+ P VE+ I
Sbjct: 205 AEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYKEICAPQVEEFCYI 264
Query: 266 CDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELMSFFIIELSLV 325
D Y R + + LE ++ ++ ELSL+
Sbjct: 265 TDNTYFRDEDPALH--------------------------------LEFLANYVAELSLL 292
Query: 326 EYEMLKFQPSMLAAAAIYTAQCTINGFK-SWNKCCELHTKYSEEQLMECSKMMVELHQKA 384
EY +L + PS++AA+AI+ A+ + K WN +T+Y +L +C K + L
Sbjct: 293 EYNLLSYPPSLVAASAIFLAKFILQPAKHPWNSTLAHYTQYKSSELSDCVKALHRLFCVG 352
Query: 385 GHGKLTGVHRKYSTFRYGCAAK 406
L + KY+ +Y AK
Sbjct: 353 PGSNLPAIREKYTQHKYKFVAK 374
>Os03g0208700
Length = 389
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 9/203 (4%)
Query: 157 LAVVEYVDEIYSFYRRSEGLSCVSP--NYM--LSQNDINEKMRGILIDWLIEVHYKLELL 212
LAVV YV++I + R E P NY+ + IN +RGIL+DW+ +V Y L
Sbjct: 109 LAVVPYVEDIDRYLRSLEAEQTRRPMINYVQEIQGGIINMDVRGILVDWMADVAYVFNLQ 168
Query: 213 DETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAYTR 272
+ETL V+ +DRFL++ KL+L+G TA+ +A KYEE+ P V + + YT
Sbjct: 169 EETLHHAVSYVDRFLSKIAFPGDKLKLLGTTALFVASKYEEIHPPHVRNFSAVTVNTYTT 228
Query: 273 TDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAA-----QSDKKLELMSFFIIELSLVEY 327
+ +ME I+ L FD+ PT F+R+FL + S++KLELM ++ ELSL++
Sbjct: 229 QQVSKMELDILRFLNFDVGSPTVITFLRKFLTSCCGGNNSSNRKLELMCNYLAELSLLDD 288
Query: 328 EMLKFQPSMLAAAAIYTAQCTIN 350
++F PS++AAA ++ + T+N
Sbjct: 289 YYIRFLPSIVAAACLFVGKFTLN 311
>Os05g0237100 Similar to Type A-like cyclin
Length = 204
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 113/186 (60%), Gaps = 8/186 (4%)
Query: 234 RKKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVP 293
R+K+QL+GV +L+A KYEE+ P VE+L I D YT+ ++L+ME ++ L+F+M+ P
Sbjct: 5 RRKMQLLGVACLLIASKYEEICPPQVEELCYISDNTYTKDEVLKMEASVLKYLKFEMTAP 64
Query: 294 TPYCFMRRFLKAAQSDKK-----LELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCT 348
T CF+RRFL+AAQ + LE ++ +I ELSL+EY ++ + PS++AA++I+ A+
Sbjct: 65 TTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYVPSLIAASSIFLAKFI 124
Query: 349 INGFKS-WNKCCELHTKYSEEQLMECSKMMVELHQKAGHGKLTGVHRKYSTFRYGCAAK- 406
+ ++ WN +T+Y L C+K + L G L V KYS +Y AK
Sbjct: 125 LKPTENPWNSTLSFYTQYKPSDLCNCAKGLHRLFLVGPGGNLRAVREKYSQHKYKFVAKK 184
Query: 407 -SEPAV 411
S P++
Sbjct: 185 YSPPSI 190
>Os03g0208800
Length = 406
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 23/262 (8%)
Query: 158 AVVEYVDEIYSFYRRSEG---LSCVSP--------------NYMLSQNDINEKMRGILID 200
AV YV++I + R EG C+ NY + MRG L++
Sbjct: 115 AVAPYVEDIDRYLRSLEGREMAKCLDAVQFCTAEESRRPIVNYDQEIQGGHINMRGKLVN 174
Query: 201 WLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPVVE 260
W+ E+ Y L D L+L V+ +DRFL+R V R++LQL+G +A+ +A KYE+ P
Sbjct: 175 WMEELVYGFNLWDNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVASKYEDRCHPSAR 234
Query: 261 DLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDK-----KLELM 315
I YT ++ ME I++ L F M PT F+RRFL + + +LELM
Sbjct: 235 FFSSITADTYTTQQVVAMEANILSFLNFQMGSPTVITFLRRFLFSCRGSNRPINIRLELM 294
Query: 316 SFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTIN-GFKSWNKCCELHTKYSEEQLMECS 374
++ ELSL++ ++F PS++AAA ++ + T+N + WN + T Y + +C
Sbjct: 295 CIYLAELSLLDDYNIRFLPSIVAAACLFVGKFTLNPNTRPWNLSVQRITGYKVSDIEDCI 354
Query: 375 KMMVELHQKAGHGKLTGVHRKY 396
+ + +L L + KY
Sbjct: 355 RSIHDLQAGRKWSNLRAIRSKY 376
>Os03g0225200 Cyclin-like domain containing protein
Length = 469
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Query: 193 KMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVV-RKKLQLVGVTAMLLACKY 251
+ R ++++W++E ++L ET+F+ + ++DRFL R V + LQL+G+ LA +
Sbjct: 274 EQRVVMVNWIMEHSQAMKLQPETVFMGIGLMDRFLTRGYVKGSRNLQLLGIACTTLATRI 333
Query: 252 EEVSVP---VVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQS 308
EE + P +++ + Y+R++++ ME ++ L F V T + F+ +LKAA +
Sbjct: 334 EE-NQPYNCILQKAFKVGINTYSRSEVVAMEWLVQEVLDFQCFVTTTHHFLWFYLKAANA 392
Query: 309 DKKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEE 368
D ++E ++ ++ LSL++++ L F PS +AAA + A N S + E H + +
Sbjct: 393 DDRVEDLAKYLALLSLLDHKHLSFWPSTVAAAVVALACLATNNESSCHLVMETHMRTKND 452
Query: 369 QLMEC 373
L EC
Sbjct: 453 DLPEC 457
>Os02g0607000
Length = 390
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 180 SPNYM--LSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFL---ARENVVR 234
SP+Y+ + I+ R L+ W+ + ++ EL TL V+ DRFL A +
Sbjct: 178 SPDYLDTVHNGQISAASRASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSARALPSYTE 237
Query: 235 KKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRA--YTRTDILEMERMIVNTLQFDMSV 292
+L LVG TA+ A KYE+ D I + ++L MER ++ L + +
Sbjct: 238 HQLSLVGATAVYTAAKYEDQGTVFKLDAREIASYGEFASAQEVLAMEREMMAALGYRLGG 297
Query: 293 PTPYCFMRRFLKAAQSDKKLEL--MSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTIN 350
P F+ F + ++ ++L + ++ I + SL Y L + PS++AAA I A+ T+N
Sbjct: 298 PNAETFVEHFTRYSKGKEELRVQRLARHIADRSLESYGCLGYLPSVVAAAVISIARWTLN 357
Query: 351 GFKSWNKCCELH--TKYSEEQLMEC 373
+ ELH T YS + + C
Sbjct: 358 PPGALPWSSELHELTGYSSQDISSC 382
>Os02g0604800
Length = 400
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 194 MRGILIDWLIEVHYKLELLDETLFLTVNIIDRFLA--RENVVRKKLQLVGVTAMLLACKY 251
+R +I ++ E EL D TL +DR+L+ E+ +L+LVG TA+ LA KY
Sbjct: 187 VRASMIAFMDEFSRFYELADGTLQRAAYFLDRYLSVTPESDDVLQLRLVGATAVFLAAKY 246
Query: 252 EEVSVPVVEDLILICDR----AYTRTDILE-MERMIVNTLQFDMSVPTPYCFMRRFLKAA 306
E+ D ++ R + TR ++ ME I+ L +++S PT F++ F +
Sbjct: 247 EDQYTLRKIDASMVAARCGYTSETRHKMVSCMETEILAALDYNLSGPTASTFVQHFTRYY 306
Query: 307 QSDKKLELM---SFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHT 363
K+ EL+ + + SL+ Y ++ PS++AA+AI+ A+ + G + W++ T
Sbjct: 307 GDGKEEELLKEAAHRFTDGSLLTYGFHRYLPSVVAASAIFLARLHVLGHEPWSRDLAELT 366
Query: 364 KYSEEQLMEC 373
Y LM C
Sbjct: 367 GYEAIDLMGC 376
>Os02g0605000 Cyclin-like domain containing protein
Length = 446
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 180 SPNYM--LSQNDINEKMRGILIDWLIEVHYKLELLDETLFLTVNIIDRFL---ARENVVR 234
SP+Y+ + I+ R L+ W+ + ++ EL TL V+ DRFL A +
Sbjct: 234 SPDYLDTVQGGQISAAARASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSVRALPSYTA 293
Query: 235 KKLQLVGVTAMLLACKYEEVSVPVVEDLILICDRA--YTRTDILEMERMIVNTLQFDMSV 292
+L LV TA+ A KYE+ D I + ++L MER ++ L + +
Sbjct: 294 HQLSLVAATAVYTAAKYEDQGTVFKLDAREIASYGEFASAQEVLAMEREMMAALGYRLGG 353
Query: 293 PTPYCFMRRFLKAAQSDKKLEL--MSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQCTIN 350
P F+ F + ++ ++L + ++ + + SL Y L + PSM+AAAAI A+ T+N
Sbjct: 354 PNAETFVEHFTRYSKGKEELRVQRLACHVADRSLESYGCLGYLPSMVAAAAISIARWTLN 413
Query: 351 --GFKSWNKCCELHTKYSEEQLMEC 373
G W+ + T YS + + C
Sbjct: 414 PPGALPWSSELQELTGYSSQDISSC 438
>Os02g0607400
Length = 971
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 162 YVDEIYSFYRRSEGLSCVSPNYMLSQNDINEKM----RGILIDWLIEVHYKLELLDETLF 217
Y DEI + R E P+ + +M R +I ++ E EL D TL
Sbjct: 609 YDDEIEATLRAMETNPAERPSPYFLETTQGGRMTALVRASMIAFMDEFSRFHELADGTLQ 668
Query: 218 LTVNIIDRFLA--RENVVRKKLQLVGVTAMLLACKYE-EVSVPVVEDLILICDRAYTRTD 274
+DR+L+ E+ +L+LVG TA+ LA KYE + ++ ++ ++ R YT
Sbjct: 669 RAAYFLDRYLSVTPESDDALQLRLVGATAVFLAAKYEDQYTLRKIDASMVAARRGYTSET 728
Query: 275 ----ILEMERMIVNTLQFDMSVPTPYCFMRRFLK---AAQSDKKLELMSFFIIELSLVEY 327
+ ME ++ L F++ PT Y F+ F + + ++ L+ + + SL+ Y
Sbjct: 729 RHKMVSIMETEMLAALGFNLGGPTAYTFVEHFTRYYGDGEEEELLKEAAHRFADGSLLTY 788
Query: 328 EMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECS 374
++ PS++AA++I+ A+ + G + W++ T Y LM C
Sbjct: 789 GFHRYLPSIVAASSIFLARLDVLGHEPWSQDLAELTGYKAIDLMGCG 835
>Os03g0203800 Cyclin-like domain containing protein
Length = 345
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 195 RGILIDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKK---LQLVGVTAMLLACKY 251
R + W+++ + +T ++ V +DRFLAR V R K LQL+ V + LA K
Sbjct: 100 RAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKV 159
Query: 252 EEVSVPVVEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSD-- 309
EE P + + L Y ++ ME +++ TL++ M TP+ ++ F + D
Sbjct: 160 EERRPPRLPEFKL---DMYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDER 216
Query: 310 KKLELMSFFIIELSLVEYEMLKFQPSMLAAAAIYTAQ 346
K + L + I S+ + +QPS +A AAI A+
Sbjct: 217 KAIVLRAIECIFASIKVISSVGYQPSTIALAAILIAR 253
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,622,242
Number of extensions: 477066
Number of successful extensions: 1420
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 1406
Number of HSP's successfully gapped: 23
Length of query: 419
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 316
Effective length of database: 11,657,759
Effective search space: 3683851844
Effective search space used: 3683851844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)