BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0694000 Os06g0694000|AK111850
(630 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0694000 Similar to FKF1 (Adagio 3) 1147 0.0
Os02g0150800 Cyclin-like F-box domain containing protein 822 0.0
Os11g0547000 Similar to FKF1 771 0.0
Os08g0230300 Galactose oxidase, central domain containing p... 136 6e-32
AK065447 93 8e-19
Os11g0102200 Similar to NPH1-1 92 9e-19
Os12g0101800 Similar to NPH1-1 92 9e-19
Os01g0300900 Galactose oxidase, central domain containing p... 83 8e-16
Os04g0304200 Similar to Nonphototropic hypocotyl protein 1 ... 77 4e-14
Os02g0822800 Galactose oxidase, central domain containing p... 73 5e-13
Os12g0617900 Similar to Serine/threonine protein phosphatas... 73 5e-13
Os03g0835600 Acyl-coA-binding protein, ACBP family protein 72 9e-13
AK111224 71 3e-12
Os05g0144400 Serine/threonine protein phosphatase, BSU1 fam... 70 3e-12
Os03g0835800 Galactose oxidase, central domain containing p... 69 7e-12
Os12g0538800 Galactose oxidase, central domain containing p... 69 2e-11
Os12g0540800 Galactose oxidase, central domain containing p... 67 5e-11
>Os06g0694000 Similar to FKF1 (Adagio 3)
Length = 630
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/630 (90%), Positives = 573/630 (90%)
Query: 1 MEWDSESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLRASGPCGL 60
MEWDSESD MLRASGPCGL
Sbjct: 1 MEWDSESDGAGSIGAGEEEEEEEEEEEGGFGGGGGGGGGGGGMFSFAIEGMLRASGPCGL 60
Query: 61 VVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSEI 120
VVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSEI
Sbjct: 61 VVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSEI 120
Query: 121 RKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGPLP 180
RKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGPLP
Sbjct: 121 RKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGPLP 180
Query: 181 GSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSLFQLTDEVLCQSILSRLSPRDIA 240
GSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSLFQLTDEVLCQSILSRLSPRDIA
Sbjct: 181 GSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSLFQLTDEVLCQSILSRLSPRDIA 240
Query: 241 SVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALETVPAAKRLGWGRLARELTTLEAVA 300
SVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALETVPAAKRLGWGRLARELTTLEAVA
Sbjct: 241 SVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALETVPAAKRLGWGRLARELTTLEAVA 300
Query: 301 WRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVS 360
WRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVS
Sbjct: 301 WRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVS 360
Query: 361 SAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRSW 420
SAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRSW
Sbjct: 361 SAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRSW 420
Query: 421 HSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHSMSVYG 480
HSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHSMSVYG
Sbjct: 421 HSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHSMSVYG 480
Query: 481 GRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSXXXXXXXXXXXXXXXRLDH 540
GRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGS RLDH
Sbjct: 481 GRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSGMPGAGNPAGAGPPPRLDH 540
Query: 541 VAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVG 600
VAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVG
Sbjct: 541 VAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVG 600
Query: 601 GTKAIVLGGQTGEEWMLTEIHELSLASSTV 630
GTKAIVLGGQTGEEWMLTEIHELSLASSTV
Sbjct: 601 GTKAIVLGGQTGEEWMLTEIHELSLASSTV 630
>Os02g0150800 Cyclin-like F-box domain containing protein
Length = 483
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/486 (83%), Positives = 429/486 (88%), Gaps = 3/486 (0%)
Query: 145 MNKLHLTPIYGDDETITHYMGIQFFTNANVDLGPLPGSLTKEPVRSTRFTPDNFFRPIST 204
M KL LTPIYGDDETITHYMG+QFF ++NVDLGPL S TKE VRST TPDN RP
Sbjct: 1 MAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPLSVSTTKEIVRSTLITPDNTIRPSPM 60
Query: 205 GPGQSNFCREYSSLFQLTDEVLCQSILSRLSPRDIASVSSVCRRLYLLTRNEDLWRMVCQ 264
G G FC E+S LF L+DEVLCQ ILSRLSPRDIASV+SVC+RLY LTRN+DLWRMVCQ
Sbjct: 61 GKG---FCSEHSDLFLLSDEVLCQKILSRLSPRDIASVNSVCKRLYHLTRNDDLWRMVCQ 117
Query: 265 NAWGSETTRALETVPAAKRLGWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGN 324
NAWGSE T+ LETV + L WGRLARELTTLEAV WRKLTVGGAVEPSRCNFSACA GN
Sbjct: 118 NAWGSEATQVLETVAGTRSLAWGRLARELTTLEAVTWRKLTVGGAVEPSRCNFSACAAGN 177
Query: 325 RVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVSSAPPGRWGHTLSCLNGSLLVVFGG 384
RVVLFGGEGVNMQPMNDTFVLDLNAS PEWRH+NV SAPPGRWGHTLSCLNGS LV+FGG
Sbjct: 178 RVVLFGGEGVNMQPMNDTFVLDLNASKPEWRHINVRSAPPGRWGHTLSCLNGSRLVLFGG 237
Query: 385 CGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLL 444
CGRQGLLNDVF LDLDA+QPTWREIPG+APPVPRSWHSSCTLDGTKLVVSGGCADSGVLL
Sbjct: 238 CGRQGLLNDVFMLDLDAQQPTWREIPGLAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLL 297
Query: 445 SDTYLLDVTMDKPVWREVPASWTPPSRLGHSMSVYGGRKILMFGGLAKSGPLRLRSSDVF 504
SDTYLLDVTM++PVWRE+PASWTPP RLGHS+SVY GRKILMFGGLAKSGPLRLRS+DVF
Sbjct: 298 SDTYLLDVTMERPVWREIPASWTPPCRLGHSLSVYDGRKILMFGGLAKSGPLRLRSNDVF 357
Query: 505 TMDLSEEEPCWRCLTGSXXXXXXXXXXXXXXXRLDHVAVSLPGGRVLIFGGSVAGLHSAS 564
T+DLSE +PCWRC+TGS RLDHVAVSLPGGR+LIFGGSVAGLHSAS
Sbjct: 358 TLDLSENKPCWRCITGSGMPGASNPAGVGPPPRLDHVAVSLPGGRILIFGGSVAGLHSAS 417
Query: 565 QLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTKAIVLGGQTGEEWMLTEIHELS 624
+LYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTKAIVLGGQTGEEW LTE+HELS
Sbjct: 418 KLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTKAIVLGGQTGEEWTLTELHELS 477
Query: 625 LASSTV 630
L SS V
Sbjct: 478 LVSSLV 483
>Os11g0547000 Similar to FKF1
Length = 630
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/568 (66%), Positives = 448/568 (78%), Gaps = 10/568 (1%)
Query: 60 LVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSE 119
+VV+DA+E D P+IYVN FE ATGYRA+EVLGRNCRFLQ R P AQRRHPLVD MVVSE
Sbjct: 67 IVVSDAVEVDFPVIYVNAAFEAATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDPMVVSE 126
Query: 120 IRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGPL 179
IR+C++ G EF+G+LLNFRKDG+PL N+L L P++GDD +TH +GIQ F+ AN+DL +
Sbjct: 127 IRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEANIDLSNV 186
Query: 180 PGSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSLFQLTDEVLCQSILSRLSPRDI 239
+ K+ +S P S EY + QL+DEVL +ILSRLSPRD+
Sbjct: 187 SYPVYKQ--QSNHRPNIQEINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLSPRDV 244
Query: 240 ASVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALETVPAAKRLGWGRLARELTTLEAV 299
AS+ SVC R++ LT+N+ L +MVCQNAWG + T LE + K LGWGRLARELTTLEA
Sbjct: 245 ASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEM--STKMLGWGRLARELTTLEAA 302
Query: 300 AWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNV 359
+WRK TVGG VEPSRCNFSACAVGNR+VLFGGEGVNMQPM+DTFVL+L ++ PEWR V V
Sbjct: 303 SWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLESAKPEWRRVKV 362
Query: 360 SSAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRS 419
S++PPGRWGHTLS LNGS LVVFGGCG+QGLLNDVF LDLDAKQPTWRE+ PP+PRS
Sbjct: 363 SASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAKQPTWREVASEGPPLPRS 422
Query: 420 WHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHSMSVY 479
WHSSCTLDG+KLVVSGGC +SGVLLSDT+LLD+T +KP W+E+P SW+PPSRLGH++SV+
Sbjct: 423 WHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWKEIPTSWSPPSRLGHTLSVF 482
Query: 480 GGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSXXXXXXXXXXXXXXXRLD 539
G K+ MFGGLAKSG LRLRS D +TMD E+ P WR L + RLD
Sbjct: 483 GKTKLFMFGGLAKSGSLRLRSCDAYTMDAGEDSPQWRQLATT------GFPSIGPPPRLD 536
Query: 540 HVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVV 599
HVAVSLP GR++IFGGS+AGLHS SQL+LLDP EEKPTWRILNVPG+PP+FAWGHSTCVV
Sbjct: 537 HVAVSLPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVV 596
Query: 600 GGTKAIVLGGQTGEEWMLTEIHELSLAS 627
GGT+ +VLGG TGEEW+L E+HEL LAS
Sbjct: 597 GGTRVLVLGGHTGEEWILNELHELCLAS 624
>Os08g0230300 Galactose oxidase, central domain containing protein
Length = 495
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 197/446 (44%), Gaps = 67/446 (15%)
Query: 223 DEVLCQSILSRLSPRDIASVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALE--TVPA 280
D+VL SIL L + S ++ CR + ++ LW +C+ WG+ T AL
Sbjct: 13 DQVL--SILHLLPAESVLSFAAACRAFHAWASSDALWEALCRRDWGARATAALAERRRRG 70
Query: 281 AKRLGWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMN 340
+ W R+ E+ L A++ R++ V GA R + S V +VLFGG +
Sbjct: 71 GGGVPWRRIYAEVALLGALSARRVPVKGASPRPRASHSLNLVAGWLVLFGGGCEGGKDAK 130
Query: 341 DTFVLDLN--ASNPEW-------RHV-------------NVSSA-----------PPGRW 367
T++L L+ A + W RH+ N SSA P GR+
Sbjct: 131 STYLLTLSSRAYSGLWHEFHMLGRHLDDTWVAYVGNGAGNRSSAVFSWQQLDSGTPSGRF 190
Query: 368 GHTLSCLNGSLLVVFGGCGRQGL-LNDVFTLDLDAKQP-----TWREIP-GVAPPVPRSW 420
GH+ S + G LV+FGG QG LND + + ++ +WR + G P PR
Sbjct: 191 GHSCSIV-GDALVLFGGINDQGQRLNDTWIGQIICEESRRMKISWRLLEVGPHAPYPRGA 249
Query: 421 HSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVT--MDKPVWREVPASW-TPPSRLGHSMS 477
H++C +D +V+ GG SG L DT+LLD++ + +W ++ + P SR GH+++
Sbjct: 250 HAACCVDDKFIVIHGGIGQSGSRLGDTWLLDLSNGLRSGIWHQIEDTEPLPLSRSGHTLT 309
Query: 478 VYGGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSXXXXXXXXXXXXXXXR 537
GG ++++FGG + +DV+ +D++E P W+ L R
Sbjct: 310 WIGGSRMVLFGGRGSEFDVL---NDVWLLDINERYPKWKELK----YDLSSVLGEMPFPR 362
Query: 538 LDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLD-----------PTEEKPTWRILNVPGR 586
+ H A + GG++L++GG + + LD K W+ L + G+
Sbjct: 363 VGHSATLVLGGKILVYGGEDSQRRRKDDFWTLDLPALLQFESGSKKMTKRMWKKLRIDGQ 422
Query: 587 PPRFAWGHSTCV-VGGTKAIVLGGQT 611
P + H CV G + GG
Sbjct: 423 CPNYRSFHGACVDTSGCHVYIFGGMV 448
>AK065447
Length = 879
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 60 LVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSE 119
VV+DA P+ PI+Y + GF TGY ++EV+GRNCRFLQ G D + +
Sbjct: 138 FVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEIDK 188
Query: 120 IRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQF----FTNANVD 175
IR+ + NG+ + G +LN++KDG+P N L + PI +D + ++G+Q +T D
Sbjct: 189 IRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKKD 248
Query: 176 LGPLPGSLTKEPVR 189
P L++ ++
Sbjct: 249 TVVRPNGLSESLIK 262
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 59 GLVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVS 118
V+TD PD PII+ + F + T Y EE+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQG---------PETDRATVR 464
Query: 119 EIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGP 178
+IR IDN E L+N+ K G N HL P+ + +++G+Q +V
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ--- 521
Query: 179 LPGSLTKEPVRSTRFTPDNF 198
KE V + T DN
Sbjct: 522 --DDAAKEGVVLVKKTADNI 539
>Os11g0102200 Similar to NPH1-1
Length = 921
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 60 LVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSE 119
VV+DA P+ PI+Y + GF TGY ++EV+GRNCRFLQ G D + +
Sbjct: 138 FVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEIDK 188
Query: 120 IRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQF----FTNANVD 175
IR+ + NG+ + G +LN++KDG+P N L + PI +D + ++G+Q +T D
Sbjct: 189 IRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKKD 248
Query: 176 LGPLPGSLTKEPVR 189
P L++ ++
Sbjct: 249 TVVRPNGLSESLIK 262
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 59 GLVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVS 118
V+TD PD PII+ + F + T Y EE+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQG---------PETDRATVR 464
Query: 119 EIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGP 178
+IR IDN E L+N+ K G N HL P+ + +++G+Q +V
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ--- 521
Query: 179 LPGSLTKEPVRSTRFTPDNF 198
KE V + T DN
Sbjct: 522 --DDAAKEGVVLVKKTADNI 539
>Os12g0101800 Similar to NPH1-1
Length = 921
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 60 LVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSE 119
VV+DA P+ PI+Y + GF TGY ++EV+GRNCRFLQ G D + +
Sbjct: 138 FVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSG---------TDPHEIDK 188
Query: 120 IRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQF----FTNANVD 175
IR+ + NG+ + G +LN++KDG+P N L + PI +D + ++G+Q +T D
Sbjct: 189 IRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKKD 248
Query: 176 LGPLPGSLTKEPVR 189
P L++ ++
Sbjct: 249 TVVRPNGLSESLIK 262
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 59 GLVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVS 118
V+TD PD PII+ + F + T Y EE+LGRNCRFLQ P D V
Sbjct: 414 NFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQG---------PETDRATVR 464
Query: 119 EIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGP 178
+IR IDN E L+N+ K G N HL P+ + +++G+Q +V
Sbjct: 465 KIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQ--- 521
Query: 179 LPGSLTKEPVRSTRFTPDNF 198
KE V + T DN
Sbjct: 522 --DDAAKEGVVLVKKTADNI 539
>Os01g0300900 Galactose oxidase, central domain containing protein
Length = 624
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 125/291 (42%), Gaps = 31/291 (10%)
Query: 295 TLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEW 354
LE +AW L GA +R + A VG+R+++FGG + +ND VLDL EW
Sbjct: 53 NLETMAWSSLATTGARPGTRDSHGAALVGHRMMVFGGTN-GSKKVNDLHVLDLRTK--EW 109
Query: 355 RHVNVSSAPPG-RWGHTLSCLNG-SLLVVFGGCGRQ--GLLNDVFTLDLDAKQPTWREIP 410
PP R HT++ G LVVFGG G LNDV LD+ + E+
Sbjct: 110 TKPPCKGTPPSPRESHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVK 169
Query: 411 GVAPPVPRSWHSSCTLDGTKLVVSGG-CADSGVLLSDTYLLDVTMDKPVW-REVPASWTP 468
G P PR H + + G++LVV GG C D + +LD MD W R +P
Sbjct: 170 GDVVPAPRDSHGAVAV-GSRLVVYGGDCGDR--YHGEVDVLD--MDAMAWSRFAVKGASP 224
Query: 469 PSRLGHSMSVYGGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSXXXXXXX 528
R GH+ +V G K+ + GG+ + SD + +D++ W L
Sbjct: 225 GVRAGHA-AVGVGSKVYVIGGVGD----KQYYSDAWILDVANR--SWTQLE--------- 268
Query: 529 XXXXXXXXRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWR 579
R H AV L + I+GG ++L +L E P R
Sbjct: 269 ICGQQPQGRFSHSAVVL-NTDIAIYGGCGEDERPLNELLILQLGSEHPNGR 318
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 132/332 (39%), Gaps = 33/332 (9%)
Query: 301 WRKLTVGGAVEPSRCNFSACAVGNRVVLFGG--EGVNMQPMNDTFVLDLNASNPEWRHVN 358
W V G P R SAC V +FGG G++ + VL LN W +
Sbjct: 9 WLYPKVVGFNPPERWGHSACFFEGVVYVFGGCCGGLHF-----SDVLTLNLETMAWSSLA 63
Query: 359 VSSAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIP-GVAPPVP 417
+ A PG + L G ++VFGG +ND+ LDL K+ W + P PP P
Sbjct: 64 TTGARPGTRDSHGAALVGHRMMVFGGTNGSKKVNDLHVLDLRTKE--WTKPPCKGTPPSP 121
Query: 418 RSWHSSCTLDG-TKLVVSGGCAD-SGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHS 475
R H+ G +LVV GG + G L+D ++LDV EV P R H
Sbjct: 122 RESHTVTACGGCDRLVVFGGSGEGEGNYLNDVHVLDVATMTWSSPEVKGDVVPAPRDSHG 181
Query: 476 MSVYGGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSXXXXXXXXXXXXXX 535
G R ++++GG G DV MD W
Sbjct: 182 AVAVGSR-LVVYGG--DCGDRYHGEVDVLDMDAM----AWSRFA---------VKGASPG 225
Query: 536 XRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLLDPTEEKPTWRILNVPGRPPRFAWGHS 595
R H AV + G +V + GG V S ++LD +W L + G+ P+ + HS
Sbjct: 226 VRAGHAAVGV-GSKVYVIGG-VGDKQYYSDAWILDVANR--SWTQLEICGQQPQGRFSHS 281
Query: 596 TCVVGGTKAIVLGGQTGEEWMLTEIHELSLAS 627
V+ T + GG +E L E+ L L S
Sbjct: 282 AVVL-NTDIAIYGGCGEDERPLNELLILQLGS 312
>Os04g0304200 Similar to Nonphototropic hypocotyl protein 1 (EC 2.7.1.37)
(Phototropin)
Length = 771
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 59 GLVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVS 118
V+TD PD PII+ + F E T Y EE+LGRNCRFLQ P D V
Sbjct: 253 NFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQG---------PETDQGTVD 303
Query: 119 EIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQFFTNANVDLGP 178
+IR+ I E L+N+ K G N HL P+ + +++G+Q + +V+ P
Sbjct: 304 KIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVE--P 361
Query: 179 LPGSLTK 185
L L++
Sbjct: 362 LRNRLSE 368
>Os02g0822800 Galactose oxidase, central domain containing protein
Length = 519
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 293 LTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNP 352
L +E +W + G V SR S VG+R+++FGGE + +ND +LDL
Sbjct: 129 LINVETNSWSSVDTYGKVPISRGGQSVSLVGSRLIMFGGEDNKRRLLNDLHILDLETM-- 186
Query: 353 EWRHVNVSSAPPG-RWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPG 411
W V P R+ H+ + L++FGG +D++ LDL + + + G
Sbjct: 187 MWEEVKTGKGGPAPRYDHSAAVYADQYLLIFGGSSHSTCFSDIYLLDLQTMEWSQPDTQG 246
Query: 412 VAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWR---EVPASWTP 468
A PRS H+ +D +V GG SG +DT +++ + K VW VPA P
Sbjct: 247 -AHINPRSGHAGTMIDENWYIVGGGDNASGS--TDTIMMNAS--KFVWSVVTSVPAR-DP 300
Query: 469 PSRLGHSM---SVYGGRKILMFGGLAKSGPLRLRSSDVFTMDL 508
+ G ++ +V G + ++ FGG ++++F M L
Sbjct: 301 LACEGLTLCSTTVDGEKFLVAFGGYNGQ-----YNNEIFVMKL 338
>Os12g0617900 Similar to Serine/threonine protein phosphatase BSL2 (EC 3.1.3.16)
(BSU1-like protein 2)
Length = 1009
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 90/212 (42%), Gaps = 5/212 (2%)
Query: 301 WRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVS 360
W +LT G R A AVG VV+ GG G D VLDL P W V V
Sbjct: 162 WSRLTPVGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221
Query: 361 SAPPG-RWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREI--PGVAPPVP 417
PG R+GH ++ + L+ GG + L DV+ LD AK WR++ G PP
Sbjct: 222 GPGPGPRYGHVMALVGQRFLLTIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPC 281
Query: 418 RSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPSRLGHSMS 477
+S DG L+ G A+S V L+ Y L D W A PS +
Sbjct: 282 MYATASARSDGLLLLCGGRDANS-VPLASAYGLAKHRDG-RWEWAIAPGVSPSPRYQHAA 339
Query: 478 VYGGRKILMFGGLAKSGPLRLRSSDVFTMDLS 509
V+ ++ + GG G + SS V +D +
Sbjct: 340 VFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 371
>Os03g0835600 Acyl-coA-binding protein, ACBP family protein
Length = 655
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 301 WRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVS 360
W + G SR S VG +VLFGGE +ND +LDL W V+
Sbjct: 281 WSIVKTYGKPPVSRGGQSVTLVGTTLVLFGGEDAKRCLLNDLHILDLETMT--WDDVDAI 338
Query: 361 SAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRSW 420
PP R H +C L++FGG ND+ LDL + + + G+AP PR+
Sbjct: 339 GTPPPRSDHAAACHADRYLLIFGGGSHATCFNDLHVLDLQTMEWSRPKQQGLAPS-PRAG 397
Query: 421 HSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVT 453
H+ T+ +V GG SGV S+T +L+++
Sbjct: 398 HAGATVGENWYIVGGGNNKSGV--SETLVLNMS 428
>AK111224
Length = 822
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 62 VTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSEIR 121
+TD D PII+ + F T Y +GRNCRFLQ GP R V R
Sbjct: 395 LTDPSRTDNPIIFASEAFHRTTQYGVSYAIGRNCRFLQ--GPKTNR-------ASVDRFR 445
Query: 122 KCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETITHYMGIQF 168
+ +G E +LN+R+DGSP MN L PI I +++G Q
Sbjct: 446 AAVKSGHEHSEVMLNYRRDGSPFMNLLMTAPILDSRGNIRYFIGAQI 492
>Os05g0144400 Serine/threonine protein phosphatase, BSU1 family protein
Length = 883
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 5/197 (2%)
Query: 301 WRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVS 360
W +L G R +A AVG VV GG G +D +VLDL +W V V
Sbjct: 90 WTRLHPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ 149
Query: 361 SAPPG-RWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREI-PGVAPPVPR 418
A PG R+GH + + LV G + +L+D + LD K W+++ P P R
Sbjct: 150 GAGPGPRYGHCMDLVAQRYLVTVSGNDGKRVLSDAWALDTAQKPYRWQKLNPDGDRPSAR 209
Query: 419 SWHSSCTLDGTKLVVSGGCADSGVLLSDTY-LLDVTMDKPVWREVPASWTPPSRLGHSMS 477
+ ++ L++ GG SG+ LSD Y LL T + W P +P R H+ +
Sbjct: 210 MYATASARTDGMLLLCGGRDASGMPLSDAYGLLMHTSGQWEWTLAPGV-SPSPRYQHA-A 267
Query: 478 VYGGRKILMFGGLAKSG 494
V+ G ++ + GG+ + G
Sbjct: 268 VFVGARLHVTGGVLRGG 284
>Os03g0835800 Galactose oxidase, central domain containing protein
Length = 476
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 109/266 (40%), Gaps = 35/266 (13%)
Query: 363 PPGRWGHTLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWRE-------IPGVAPP 415
P R GHT + S +VVFGG + L+D+ D++ + W G A P
Sbjct: 25 PAPRSGHTAVSIGKSKVVVFGGFADKRFLSDIAVYDVENR--IWYTPECNGSGSDGQAGP 82
Query: 416 VPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPASWTPPS-RLGH 474
PR++H + +D + G G L D ++LD + + W E+ PS R
Sbjct: 83 SPRAFHVAIVIDCNMFIFGG--RSGGKRLGDFWMLDTDIWQ--WSELTGFGDLPSPREFA 138
Query: 475 SMSVYGGRKILMFGGLAKSGPLRLRSSDVFTMDLSEEEPCWRCLTGSXXXXXXXXXXXXX 534
+ S G RKI+M+GG L SDV+ MD E +TGS
Sbjct: 139 AASAIGNRKIVMYGGWDGKKWL----SDVYIMDTMSLEWTELSVTGS-----------VP 183
Query: 535 XXRLDHVAVSLPGGRVLIFGGSVAGLHSASQLYLL----DPTEEKPTWRILNVPGRPPRF 590
R H A + R+L+FGG L+ L + E P W L +PG+ P
Sbjct: 184 PPRCGHSATMIE-KRLLVFGGRGGAGPIMGDLWALKGVTEEDNETPGWTQLKLPGQSPSP 242
Query: 591 AWGHSTCVVGGTKAIVLGGQTGEEWM 616
GHS GG ++ GG W+
Sbjct: 243 RCGHSV-TSGGPYLLLFGGHGTGGWL 267
>Os12g0538800 Galactose oxidase, central domain containing protein
Length = 698
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 276 ETVPAAKRLG-WGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGV 334
+T PA+ RL W +E W + G + +R + G ++LFGGE
Sbjct: 169 KTEPASDRLAVW------TFNMETEVWSLMEAKGDIPAARSGHTVTRAGATLILFGGEDT 222
Query: 335 NMQPMNDTFVLDLNASNPEWRHVNVS-SAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLND 393
+ +D + DL +S W +N S P R H + +L++FGG + LND
Sbjct: 223 KGKKRHDLHMFDLKSST--WLPLNYKGSGPSPRSNHVAALYEDRILLIFGGHSKSKTLND 280
Query: 394 VFTLDLDAKQPTWREIPGVAP-PVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLLDV 452
+F+LD + W + P P PR+ S L GTK ++GG + ++T+ DV
Sbjct: 281 LFSLDFETM--VWSRVKIHGPHPTPRAG-CSGVLCGTKWYIAGGGSKKK-RHAETWAFDV 336
Query: 453 TMDKPVWREVPASWTPPSRLGHSM-SVYGGRKILM--FGGLAK 492
K VP S + ++ SM +Y KI++ FGG K
Sbjct: 337 VEYKWSVCVVPPSSSIATKKDFSMVPLYHRDKIVLVAFGGNRK 379
>Os12g0540800 Galactose oxidase, central domain containing protein
Length = 527
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 14/187 (7%)
Query: 312 PSRCN-FSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNASNPEWRHVNVSSAPPG-RWGH 369
PS C S VG +V+FGGEG +ND VLDL W + PP R H
Sbjct: 171 PSSCGGQSVTLVGGTLVVFGGEGDGRSLLNDLHVLDLETMT--WDEFETTGTPPSPRSEH 228
Query: 370 TLSCLNGSLLVVFGGCGRQGLLNDVFTLDLDAKQPTWREIPGVAPPVPRSWHSSCTLDGT 429
+C L++FGG +D+ LD+ + + E G+ P PR+ H+ T+
Sbjct: 229 AAACYADRYLLIFGGGSHSTCFSDLHLLDMQTMEWSRPEHQGITPE-PRAGHAGVTVGEN 287
Query: 430 KLVVSGGCADSGVLLSDTYLLDVTMDKPVWREVPA--SWTPPSRLGHSM---SVYGGRKI 484
+ GG GV +T +L+ M VW V PP+ G S+ V G +
Sbjct: 288 WFITGGGNNKKGV--PETLVLN--MSTFVWSVVTGLEGRAPPTSEGSSLVLHKVNGEDFL 343
Query: 485 LMFGGLA 491
+ FGG +
Sbjct: 344 VSFGGYS 350
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,913,567
Number of extensions: 1021250
Number of successful extensions: 2381
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 2223
Number of HSP's successfully gapped: 24
Length of query: 630
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 523
Effective length of database: 11,448,903
Effective search space: 5987776269
Effective search space used: 5987776269
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)