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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0547000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to FKF1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.35 (0.0493) R2 : 0.946
β1 : -- (--) R2dD : -- R2D : --
β2 : 11.3 (0.127) R2dC : 1.03 R2C : 0.797
β3 : -4.8 (0.141) R2dE : 0.151 R2E : -0.0802
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.261 (0.104) R2dN8 : 0.000992 R2N8 : -0.00286
σ : 0.924
deviance : 393.64
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_____
C
peak time of C : 14.5
E
wheather : temperature
threshold : 20.75
memory length : 340
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.08
open length of G : 7.06

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
409 0.95 7.36 0.192 11.5 -4.51 0.42 -0.677 0.24 14.4 20.7 293 3.02 7.95
399.53 0.931 7.4 0.294 11.6 -4.76 -0.105 -- 0.281 14.4 20.7 322 3.02 7.74
392.83 0.923 7.36 0.314 11.5 -4.9 -- -0.301 0.244 14.4 20.8 332 3.03 7.3
392.32 0.923 7.36 0.275 11.4 -4.81 -- -- 0.282 14.5 20.8 332 3.08 7.23
4887.4 3.27 7.34 -0.4 -- -5.29 -- -0.521 0.418 -- 17.1 1570 2.46 7.38
763.84 1.3 7.55 -0.264 10.9 -- -0.341 -- -0.154 15.7 -- -- -- --
764.19 1.29 7.55 -0.27 10.9 -- -- -- -0.156 15.7 -- -- -- --
4853.46 3.26 7.34 -0.313 -- -5.32 -- -- 0.424 -- 16.69 1589 2.33 7.15
393.64 0.924 7.35 -- 11.3 -4.8 -- -- 0.261 14.5 20.75 340 3.08 7.06
7330 4 7.53 -0.724 -- -- -- -- -0.445 -- -- -- -- --
766.1 1.29 7.54 -- 10.9 -- -- -- -0.126 15.7 -- -- -- --
4856.03 3.26 7.33 -- -- -5.32 -- -- 0.46 -- 16.69 1589 2.33 7.15
7343.82 4 7.51 -- -- -- -- -- -0.365 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 425.98 temperature 15.0 270 > th dose dependent rect. 3 7
4 444.20 temperature 20.0 270 > th dose independent rect. 3 8
14 466.77 temperature 20.0 270 > th dose independent rect. 4 18
33 495.86 temperature 20.0 270 > th dose independent rect. 3 10
62 527.24 temperature 10.0 270 > th dose dependent rect. 19 14
75 533.08 radiation 1.0 270 < th dose dependent rect. 22 13
77 533.97 temperature 30.0 10 < th dose dependent rect. 24 12
80 534.14 temperature 30.0 10 < th dose dependent rect. 24 14
89 538.95 atmosphere 995.0 270 > th dose dependent rect. 23 4
98 541.56 temperature 15.0 270 > th dose independent rect. 18 15
99 541.73 atmosphere 1010.0 90 < th dose independent rect. 5 19
115 545.70 radiation 1.0 270 < th dose independent rect. 15 7
117 546.12 atmosphere 995.0 270 > th dose dependent rect. 22 6
119 546.21 radiation 1.0 270 < th dose dependent rect. 15 7
128 547.35 humidity 70.0 270 > th dose independent rect. 18 14
130 547.69 temperature 15.0 270 > th dose independent rect. 17 6
131 547.75 temperature 15.0 10 > th dose dependent rect. 20 15
135 548.26 humidity 50.0 270 > th dose independent rect. 3 20
153 550.75 temperature 30.0 10 < th dose dependent sin 5 NA
154 550.77 humidity 70.0 270 > th dose independent rect. 17 16
157 551.17 humidity 50.0 270 > th dose independent rect. 4 18
177 553.12 radiation 40.0 270 < th dose dependent rect. 14 9
198 554.69 temperature 10.0 90 > th dose dependent rect. 5 19
202 555.04 temperature 25.0 30 < th dose independent rect. 24 12
220 556.76 radiation 10.0 270 < th dose dependent rect. 5 17
230 557.92 radiation 10.0 270 < th dose dependent rect. 4 19
233 558.19 temperature 30.0 270 < th dose independent rect. 17 5
241 559.42 atmosphere 1010.0 270 < th dose independent rect. 18 4
244 559.98 temperature 30.0 270 < th dose independent rect. 18 14
248 560.21 temperature 30.0 270 < th dose independent rect. 17 16
256 561.31 wind 7.0 270 < th dose independent rect. 23 4
257 561.36 radiation 20.0 270 < th dose independent rect. 15 8
259 561.42 precipitation 0.1 270 < th dose independent rect. 23 4
260 561.42 precipitation 0.1 270 < th dose dependent rect. 23 4
262 561.45 temperature 10.0 270 > th dose independent rect. 23 4
263 561.45 temperature 30.0 270 < th dose independent rect. 23 4
264 561.45 humidity 50.0 270 > th dose independent rect. 23 4
267 561.45 atmosphere 995.0 270 > th dose independent rect. 23 4
268 561.45 radiation 1.0 270 < th dose independent rect. 23 4
274 561.45 radiation 1.0 270 < th dose dependent rect. 23 4
280 561.64 atmosphere 1010.0 270 < th dose independent rect. 17 6
288 562.04 atmosphere 995.0 270 > th dose independent rect. 3 20
302 563.02 atmosphere 1010.0 270 < th dose independent rect. 19 2
307 563.41 precipitation 0.1 270 < th dose independent rect. 22 6
308 563.41 precipitation 0.1 270 < th dose dependent rect. 22 6
311 563.53 wind 7.0 270 < th dose independent rect. 22 6
313 563.75 atmosphere 995.0 270 > th dose independent rect. 4 18
315 563.92 radiation 1.0 270 > th dose independent rect. 9 20
319 564.19 temperature 25.0 30 > th dose independent rect. 20 15
321 564.27 radiation 20.0 270 < th dose independent rect. 18 14
322 564.31 radiation 1.0 270 > th dose independent rect. 9 10
332 564.33 radiation 1.0 270 < th dose independent rect. 22 13
334 564.35 humidity 70.0 270 > th dose independent rect. 17 5
339 564.51 temperature 10.0 270 > th dose independent rect. 22 6
340 564.51 temperature 30.0 270 < th dose independent rect. 22 6
341 564.51 humidity 50.0 270 > th dose independent rect. 22 6
344 564.51 atmosphere 995.0 270 > th dose independent rect. 22 6
345 564.51 radiation 1.0 270 < th dose independent rect. 22 6
351 564.51 radiation 1.0 270 < th dose dependent rect. 22 6
380 566.41 temperature 15.0 270 > th dose independent rect. 19 2
386 566.58 wind 9.0 270 < th dose independent rect. 3 20
423 568.84 wind 9.0 270 < th dose independent rect. 4 18
473 570.89 atmosphere 995.0 270 > th dose independent rect. 18 14
478 571.26 atmosphere 1015.0 270 < th dose independent rect. 23 4
482 571.32 temperature 10.0 10 > th dose dependent sin 5 NA
487 571.76 humidity 50.0 270 > th dose dependent rect. 17 5
490 571.85 precipitation 0.1 270 < th dose independent rect. 8 10
491 571.85 precipitation 0.1 270 < th dose dependent rect. 8 10
511 572.85 atmosphere 1010.0 90 < th dose independent rect. 19 16
516 573.08 temperature 10.0 270 > th dose independent rect. 8 10
517 573.08 atmosphere 1015.0 270 < th dose independent rect. 8 10
524 573.27 wind 1.0 270 > th dose independent rect. 23 4
536 574.06 wind 9.0 270 < th dose independent rect. 18 14
540 574.38 humidity 50.0 270 > th dose dependent rect. 23 4
554 575.02 temperature 25.0 30 > th dose independent sin 5 NA
571 575.71 wind 1.0 270 > th dose independent rect. 8 10
585 576.28 precipitation 0.1 270 < th dose independent rect. 3 20
586 576.28 precipitation 0.1 270 < th dose dependent rect. 3 20
587 576.29 wind 9.0 270 < th dose independent rect. 9 9
588 576.29 precipitation 0.1 270 < th dose independent rect. 4 18
589 576.29 precipitation 0.1 270 < th dose dependent rect. 4 18
606 576.97 atmosphere 995.0 270 > th dose independent rect. 17 5
609 577.01 radiation 1.0 270 < th dose independent rect. 5 17
618 577.39 humidity 50.0 270 > th dose independent rect. 16 7
621 577.43 wind 9.0 270 < th dose dependent rect. 23 4
632 577.92 temperature 25.0 30 < th dose independent sin 5 NA
682 579.55 precipitation 0.1 270 < th dose independent rect. 22 19
683 579.55 precipitation 0.1 270 < th dose dependent rect. 22 19
731 581.48 radiation 40.0 270 < th dose dependent rect. 18 14
737 581.51 temperature 10.0 270 > th dose independent rect. 22 19
754 582.48 temperature 10.0 270 > th dose dependent rect. 23 4
758 582.74 radiation 1.0 270 < th dose independent rect. 4 19
762 582.91 humidity 50.0 270 > th dose dependent rect. 4 18
768 583.09 precipitation 0.1 270 < th dose independent rect. 11 16
769 583.09 precipitation 0.1 270 < th dose dependent rect. 11 16
774 583.20 wind 9.0 270 < th dose independent rect. 17 5
790 583.67 wind 9.0 270 < th dose independent rect. 22 19
799 584.06 wind 9.0 270 < th dose dependent rect. 22 6
813 584.47 wind 1.0 270 > th dose independent rect. 23 18
838 584.68 atmosphere 1015.0 270 < th dose independent rect. 22 6
842 584.84 humidity 50.0 270 > th dose dependent rect. 22 6
850 585.17 wind 1.0 270 > th dose independent rect. 22 7
863 585.60 temperature 15.0 10 > th dose independent rect. 20 15
902 586.70 humidity 50.0 270 > th dose dependent rect. 3 20
955 588.59 wind 1.0 270 > th dose independent rect. 17 5
964 588.76 wind 7.0 270 < th dose independent rect. 3 8
986 589.72 temperature 15.0 10 > th dose independent rect. 6 18