Os02g0150800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0150800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.5 | 0.344 | 10.7 | 1.01 | 1.05 | -1.21 | -0.453 | -0.502 | 0.191 | 3.24 | 22.06 | 1050 | -- | -- |
| 54.14 | 0.343 | 10.7 | 1.15 | 1.06 | -1.18 | -0.517 | -- | 0.229 | 3.21 | 22.19 | 1037 | -- | -- |
| 54.13 | 0.343 | 10.7 | 0.991 | 1.05 | -1.2 | -- | -0.587 | 0.184 | 3.24 | 22.02 | 1037 | -- | -- |
| 54.98 | 0.345 | 10.7 | 1.15 | 1.06 | -1.15 | -- | -- | 0.231 | 3.26 | 22.22 | 1041 | -- | -- |
| 89.98 | 0.442 | 10.7 | 1.3 | -- | -1.02 | -- | -0.0131 | 0.336 | -- | 24.3 | 190 | -- | -- |
| 109.89 | 0.491 | 10.8 | 0.745 | 0.953 | -- | -0.408 | -- | -0.161 | 3.79 | -- | -- | -- | -- |
| 110.38 | 0.492 | 10.8 | 0.751 | 0.952 | -- | -- | -- | -0.159 | 3.83 | -- | -- | -- | -- |
| 87.76 | 0.436 | 10.7 | 1.05 | -- | -0.967 | -- | -- | 0.35 | -- | 24.9 | 170 | -- | -- |
| 86.78 | 0.434 | 10.8 | -- | 1.01 | -0.967 | -- | -- | 0.0686 | 3.04 | 22.4 | 938 | -- | -- |
| 160.24 | 0.592 | 10.8 | 0.791 | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
| 125.25 | 0.524 | 10.8 | -- | 0.967 | -- | -- | -- | -0.242 | 3.83 | -- | -- | -- | -- |
| 113.62 | 0.496 | 10.8 | -- | -- | -0.833 | -- | -- | 0.00822 | -- | 25.9 | 151 | -- | -- |
| 176.73 | 0.621 | 10.8 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 18 | 54.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 26 | 55.74 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 27 | 55.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 28 | 55.79 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 36 | 55.95 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 37 | 55.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 22 |
| 51 | 56.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 18 |
| 62 | 56.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 74 | 56.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 80 | 56.33 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 88 | 56.43 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 91 | 56.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 116 | 56.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 129 | 56.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 147 | 57.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 164 | 57.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 181 | 57.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 211 | 57.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 219 | 57.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 222 | 57.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 226 | 57.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 242 | 57.88 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 244 | 57.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 318 | 58.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 418 | 58.69 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 555 | 59.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 556 | 59.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 584 | 59.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 607 | 59.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 812 | 59.88 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 920 | 60.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 953 | 60.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |