Os06g0694000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to FKF1 (Adagio 3).
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Os06g0694000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to FKF1 (Adagio 3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.46 | 0.213 | 12.2 | 1.28 | 0.287 | 1.12 | 0.215 | 0.409 | 0.0719 | 10.2 | 23.1 | 34 | -- | -- |
| 20.68 | 0.212 | 12.2 | 1.33 | 0.277 | 1.07 | 0.116 | -- | 0.0774 | 10.1 | 23.1 | 40 | -- | -- |
| 20.61 | 0.211 | 12.2 | 1.3 | 0.285 | 1.11 | -- | 0.294 | 0.0719 | 10.1 | 23.02 | 34 | -- | -- |
| 20.73 | 0.212 | 12.2 | 1.33 | 0.278 | 1.06 | -- | -- | 0.0785 | 10 | 23.1 | 41 | -- | -- |
| 23.77 | 0.227 | 12.3 | 1.32 | -- | 1.15 | -- | 0.375 | 0.0689 | -- | 22.71 | 265 | -- | -- |
| 34.58 | 0.276 | 12.3 | 1.11 | 0.202 | -- | 0.0607 | -- | -0.0617 | 7.97 | -- | -- | -- | -- |
| 34.59 | 0.275 | 12.3 | 1.11 | 0.203 | -- | -- | -- | -0.0618 | 7.9 | -- | -- | -- | -- |
| 23.88 | 0.228 | 12.2 | 1.35 | -- | 1.05 | -- | -- | 0.0788 | -- | 22.9 | 265 | -- | -- |
| 63.37 | 0.373 | 12.3 | -- | 0.239 | 0.529 | -- | -- | -0.128 | 8.76 | 23 | 59 | -- | -- |
| 36.82 | 0.284 | 12.3 | 1.11 | -- | -- | -- | -- | -0.0591 | -- | -- | -- | -- | -- |
| 67.13 | 0.383 | 12.3 | -- | 0.211 | -- | -- | -- | -0.186 | 7.52 | -- | -- | -- | -- |
| 66.46 | 0.381 | 12.3 | -- | -- | 0.463 | -- | -- | -0.136 | -- | 22.8 | 40 | -- | -- |
| 69.51 | 0.389 | 12.3 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 21 |
| 5 | 21.54 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 8 | 21.58 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 25 | 21.72 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 27 | 21.72 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 28 | 21.72 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 29 | 21.73 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 32 | 21.74 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 34 | 21.74 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 36 | 21.75 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 45 | 21.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 50 | 21.81 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 75 | 21.92 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 23 |
| 138 | 22.43 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 23 |
| 140 | 22.44 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 21 |
| 166 | 22.55 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 23 |
| 187 | 22.63 | temperature | 20 | 90 | < th | dose independent | rect. | 8 | 23 |
| 217 | 22.73 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 218 | 22.73 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 262 | 22.82 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 281 | 22.85 | temperature | 20 | 10 | < th | dose independent | rect. | 5 | 23 |
| 283 | 22.87 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 300 | 22.91 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 302 | 22.91 | temperature | 20 | 10 | < th | dose independent | rect. | 7 | 23 |
| 303 | 22.91 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 23 |
| 304 | 22.91 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 23 |
| 305 | 22.91 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 306 | 22.91 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 311 | 22.92 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 23 |
| 330 | 22.96 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 337 | 22.98 | temperature | 20 | 10 | < th | dose independent | rect. | 3 | 23 |
| 367 | 23.05 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 427 | 23.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 491 | 23.25 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 608 | 23.50 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 23 |
| 629 | 23.55 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 23 |
| 637 | 23.58 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 682 | 23.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 12 |
| 704 | 23.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 711 | 23.77 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 16 |
| 726 | 23.78 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 23 |
| 767 | 23.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 856 | 23.96 | temperature | 20 | 270 | > th | dose independent | sin | 12 | NA |
| 921 | 24.03 | temperature | 20 | 10 | < th | dose independent | sin | 10 | NA |
| 937 | 24.05 | temperature | 20 | 90 | < th | dose independent | sin | 12 | NA |
| 991 | 24.10 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |