BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0255700 Os06g0255700|AK072159
(946 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0255700 DEAD/DEAH box helicase, N-terminal domain cont... 1919 0.0
Os07g0434500 DEAD/DEAH box helicase, N-terminal domain cont... 1202 0.0
Os03g0165266 DEAD/DEAH box helicase, N-terminal domain cont... 722 0.0
Os08g0289300 DEAD/DEAH box helicase, N-terminal domain cont... 583 e-166
Os02g0650800 306 4e-83
Os05g0392400 SNF2-related domain containing protein 211 2e-54
Os07g0692600 SNF2-related domain containing protein 196 1e-49
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 178 2e-44
AK111184 142 9e-34
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 127 5e-29
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 126 8e-29
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 122 2e-27
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 114 3e-25
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 112 1e-24
Os02g0762800 DEAD/DEAH box helicase, N-terminal domain cont... 96 1e-19
Os05g0150300 Similar to Possible global transcription activ... 94 7e-19
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 71 3e-12
Os01g0367900 Similar to Possible global transcription activ... 70 7e-12
>Os06g0255700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 946
Score = 1919 bits (4971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 928/946 (98%), Positives = 928/946 (98%)
Query: 1 MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFL 60
MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFL
Sbjct: 1 MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFL 60
Query: 61 SSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQ 120
SSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQ
Sbjct: 61 SSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQ 120
Query: 121 APSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQ 180
APSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQ
Sbjct: 121 APSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQ 180
Query: 181 YERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGT 240
YERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGT
Sbjct: 181 YERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGT 240
Query: 241 NLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAE 300
NLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAE
Sbjct: 241 NLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAE 300
Query: 301 CTKLDTNEDMSXXXXXXXXXXXXXXXXXXIRIHEDLGHVCRICGMIVRKAETIIDYQWKK 360
CTKLDTNEDMS IRIHEDLGHVCRICGMIVRKAETIIDYQWKK
Sbjct: 301 CTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKK 360
Query: 361 ASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNL 420
ASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNL
Sbjct: 361 ASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNL 420
Query: 421 VGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVE 480
VGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVE
Sbjct: 421 VGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVE 480
Query: 481 DIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLL 540
DIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLL
Sbjct: 481 DIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLL 540
Query: 541 MVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFL 600
MVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFL
Sbjct: 541 MVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFL 600
Query: 601 KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELT 660
KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELT
Sbjct: 601 KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELT 660
Query: 661 KDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLS 720
KDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLS
Sbjct: 661 KDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLS 720
Query: 721 EISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILP 780
EISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILP
Sbjct: 721 EISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILP 780
Query: 781 MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGIS 840
MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGIS
Sbjct: 781 MKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGIS 840
Query: 841 LVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900
LVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI
Sbjct: 841 LVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900
Query: 901 PKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR 946
PKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR
Sbjct: 901 PKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR 946
>Os07g0434500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 909
Score = 1202 bits (3109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/587 (99%), Positives = 586/587 (99%)
Query: 360 KASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKN 419
KASRTRTNYYESRSKDAD+IDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKN
Sbjct: 323 KASRTRTNYYESRSKDADDIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKN 382
Query: 420 LVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQV 479
LVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQV
Sbjct: 383 LVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQV 442
Query: 480 EDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRL 539
EDIPLYDFYSVKADKR EQLEVLKSWEA+MSILFLGYKQFSRIICGDGDGNIAAACRDRL
Sbjct: 443 EDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDGDGNIAAACRDRL 502
Query: 540 LMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKF 599
LMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKF
Sbjct: 503 LMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKF 562
Query: 600 LKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLREL 659
LKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRK+HVIRSLREL
Sbjct: 563 LKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKSHVIRSLREL 622
Query: 660 TKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCL 719
TKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCL
Sbjct: 623 TKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCL 682
Query: 720 SEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYIL 779
SEISEGDAADRA+NLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYIL
Sbjct: 683 SEISEGDAADRATNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYIL 742
Query: 780 PMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGI 839
PMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGI
Sbjct: 743 PMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGI 802
Query: 840 SLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEV 899
SLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEV
Sbjct: 803 SLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEV 862
Query: 900 IPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR 946
IPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR
Sbjct: 863 IPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR 909
Score = 556 bits (1432), Expect = e-158, Method: Compositional matrix adjust.
Identities = 277/310 (89%), Positives = 283/310 (91%), Gaps = 9/310 (2%)
Query: 1 MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFL 60
MYY RQRKASSE NANVF+PGG N ISFPASNR HDWGYGGV +EWEASYARKLQL+NFL
Sbjct: 16 MYYCRQRKASSEVNANVFVPGGQNGISFPASNRAHDWGYGGVREEWEASYARKLQLINFL 75
Query: 61 SSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQ 120
SSLHQRTAN L+TTRMDANMDTPLEQKQKDSSAIIVLDSDDED E CEQL SENNKQQ
Sbjct: 76 SSLHQRTANSLITTRMDANMDTPLEQKQKDSSAIIVLDSDDED-EAERCEQLASENNKQQ 134
Query: 121 APSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQ 180
APSG TSP TTWIVSSAKDQVNGTLHVDGVQSTQIVPY GQNAPLINQ PLQTSWQPSIQ
Sbjct: 135 APSGPTSPCTTWIVSSAKDQVNGTLHVDGVQSTQIVPY-GQNAPLINQSPLQTSWQPSIQ 193
Query: 181 YERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGT 240
YERVILQ+RPEEQRVQDLVAASHAEKIAETQV LTLPTLPNERKRRK+EPTTLVD DGGT
Sbjct: 194 YERVILQRRPEEQRVQDLVAASHAEKIAETQVFLTLPTLPNERKRRKSEPTTLVDGDGGT 253
Query: 241 NLGKRKRKNHQNQAAVDSNLD-------LQQNDVPSQSYRTMIEEEKPVKESDGLEDLWK 293
NLGK KRKNHQNQAAVDS LD LQQNDVPSQSYRTMIEEEKPVKESDGLEDLWK
Sbjct: 254 NLGKGKRKNHQNQAAVDSILDLQQTVVPLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWK 313
Query: 294 DFSLAAECTK 303
DFSLAAECTK
Sbjct: 314 DFSLAAECTK 323
>Os03g0165266 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1078
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/666 (54%), Positives = 472/666 (70%), Gaps = 12/666 (1%)
Query: 286 DGLEDLWKDFSLAAECTKLDTNEDMSXXXXXXXXXXXXXXXXXXIRIHEDLGHVCRICGM 345
D LE LW D LA C+K D + + +DLG VCR+CG+
Sbjct: 414 DELEGLWMDMYLAMACSKT-VGSDHNIVPSENSCEQAEDECQHDFLMKDDLGIVCRVCGL 472
Query: 346 IVRKAETIIDYQWKKASRT-RTNYYESR-SKDADEIDTGAVKVSEDFIVSD-IAIHPRHA 402
I ++ E I +YQWKK ++ R E R S DAD ID + + E +V D + +HP+H+
Sbjct: 473 IQQRIENIFEYQWKKRKQSYRARPSEHRNSSDADAIDKTSGAILE--VVPDALCLHPQHS 530
Query: 403 KQMRPHQLEGFSFLVKNLVG-DKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVV 461
+ M+PHQ+EGF+FLVKNL + PGGCILAHAPGSGKTF++ISF+ SFLAKYP+ RPL++
Sbjct: 531 QHMKPHQVEGFNFLVKNLADENNPGGCILAHAPGSGKTFLIISFVHSFLAKYPAGRPLII 590
Query: 462 LPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSR 521
LPKGIL TW+ EF WQV+DIPLYDFYS KADKR EQL+VL WE SIL LGY+QF+
Sbjct: 591 LPKGILSTWRTEFLHWQVDDIPLYDFYSSKADKRSEQLKVLNLWEESRSILLLGYQQFAC 650
Query: 522 IICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLF 581
I+ A C+++LL VP+L+ILDEGHTPRN ETD+L SL+ ++TPRKVVLSGTLF
Sbjct: 651 IVSDHTSDTEAIMCQEKLLKVPSLVILDEGHTPRNEETDLLTSLENIRTPRKVVLSGTLF 710
Query: 582 QNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISG--IRSLKGVHDSAFTESVEDT 639
QNHV EVFNIL LVR KFLKM+ SR I I+S+V + G RS K + D F + V++
Sbjct: 711 QNHVREVFNILKLVRSKFLKMDKSRAIVNCILSKVDLMGKSARS-KNISDKDFFDLVQEH 769
Query: 640 LLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIE 699
L D N +A +I++LRELT DVLHYY+G +LDELPG+VDF+VFL +S+KQ+ I+ ++
Sbjct: 770 LQKDGNDKMRAVIIQNLRELTADVLHYYQGKLLDELPGIVDFTVFLNMSSKQEHIIKGLD 829
Query: 700 AYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFN 759
KF + + A+ +HPCL ++ DA D N+T+ + S+I I I DGVKAKF N
Sbjct: 830 GINKFAKRSRCNAVSLHPCLKNANKADADD--GNVTNRKIGSIISGIDINDGVKAKFVHN 887
Query: 760 ILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQF 819
+LSL+ + G K+L FSQY+ + FLE+L+ + GW IF ++G ++ D RE A+ +F
Sbjct: 888 LLSLSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRF 947
Query: 820 NNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYR 879
NNS DA+V FGSIKACGEGISLVGASR++ILDVH NPSV RQAIGRA+RPGQ K V+ YR
Sbjct: 948 NNSPDARVFFGSIKACGEGISLVGASRIVILDVHENPSVMRQAIGRAYRPGQSKMVYCYR 1007
Query: 880 LVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQD 939
LVAADSPE H TAFKKE + KLWFEW+ELC+++DF+L VD+ DSED LE++A++QD
Sbjct: 1008 LVAADSPEEDDHHTAFKKERVSKLWFEWNELCSSDDFELATVDVSDSEDRFLESSALKQD 1067
Query: 940 IKALYR 945
IKAL +
Sbjct: 1068 IKALLK 1073
>Os08g0289300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 348
Score = 583 bits (1503), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/306 (92%), Positives = 283/306 (92%)
Query: 262 LQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSXXXXXXXXXX 321
LQQNDVPSQSYRTMIEEEKPVKES+GLEDLWKDFSLAAECTKLDTNEDMS
Sbjct: 1 LQQNDVPSQSYRTMIEEEKPVKESEGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENE 60
Query: 322 XXXXXXXXIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDT 381
IRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDT
Sbjct: 61 MDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDT 120
Query: 382 GAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFM 441
GAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFM
Sbjct: 121 GAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFM 180
Query: 442 LISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEV 501
LISFIQSFLAKYPSARPLVVLPKGI TWKREFQ WQVEDIPLYDFYSVKADKRVEQLEV
Sbjct: 181 LISFIQSFLAKYPSARPLVVLPKGIGSTWKREFQWWQVEDIPLYDFYSVKADKRVEQLEV 240
Query: 502 LKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDV 561
LK WEAQMSILFLGYKQFSRIICGDGDGNIAAAC DRLLMVPNLLILDEGHTPRNRETDV
Sbjct: 241 LKYWEAQMSILFLGYKQFSRIICGDGDGNIAAACWDRLLMVPNLLILDEGHTPRNRETDV 300
Query: 562 LASLKR 567
LASLKR
Sbjct: 301 LASLKR 306
>Os02g0650800
Length = 1439
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 209/595 (35%), Positives = 321/595 (53%), Gaps = 99/595 (16%)
Query: 405 MRPHQLEGFSFLVKNLVGDKP------------GGCILAHAPGSGKTFMLISFIQSFLAK 452
M PHQ EGF F+ + L G GGC+++HAPG+GKT + I+F+QS+ A
Sbjct: 882 MFPHQQEGFEFMWRKLAGGTSIEQLRNNANTIEGGCVISHAPGTGKTRLAITFVQSYFAF 941
Query: 453 YPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSV----KADKRVEQLEV------- 501
+P P+++ P+G+L TW++EF++W+V+ +P + S K D+ ++QL +
Sbjct: 942 FPECCPVIIAPRGMLATWEQEFRKWKVK-VPFHVLNSKEINWKEDRTIKQLAIMDENLAQ 1000
Query: 502 ----------------LKSWEAQMSILFLGYKQFSRIICGDG-DGNIAAACRDRLLMVPN 544
L SW SI+ + Y F ++ DGN+ R+ LL +P+
Sbjct: 1001 SLARNKLDHKFRRKLKLASWRKGSSIIGVSYTLFRKLANQSSMDGNMV---RNLLLEMPD 1057
Query: 545 LLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMES 604
LL+LDEGHTPRN+++ + L+ V+T ++++LSGT FQN E+ N+L L+RPKF
Sbjct: 1058 LLVLDEGHTPRNKKSLIWKVLEEVRTKKRIILSGTPFQNSFLELSNVLYLIRPKF----- 1112
Query: 605 SRPIARRIMSQVAISGIRSLKGVHDSAFTESVED--TLLNDDNFTRKAHVIRSLRELTKD 662
AR S +S K + +ED T L +N T K I +R++
Sbjct: 1113 ----ARHFAS-------KSFKKI-------GLEDYWTSLTLNNITEKK--IDEIRQILDP 1152
Query: 663 VLHYYKGDILDE-LPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGT--ALY----- 714
++H + GDIL + LPGL + V L QKEI+ +E +GT A Y
Sbjct: 1153 IVHIHNGDILQKSLPGLRESVVILNPLPHQKEIITAME-----NTVTMGTLDAEYKISLA 1207
Query: 715 -IHPCLSEISEGDAADRASNLTDATVD-SLIESIIIKD--GVKAKFFFNILSLANSAGEK 770
IHP L + + S ++VD SL++S+ GVK KF I+ L + E+
Sbjct: 1208 SIHPFLVTCA------KLSEKETSSVDVSLLKSLRPNPCVGVKTKFVLEIVRLCEAMKER 1261
Query: 771 LLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNN-SADAKVLF 829
+L FSQY+ P+ + L K W G+EI ++SG+ +RE M+ FN+ ++AKV+
Sbjct: 1262 VLVFSQYLEPLSLIMDQLSKMFNWIEGEEILLMSGNVLVQNREALMEAFNDMKSNAKVML 1321
Query: 830 GSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVK 889
S KAC EGI+L+GASRV++LDV NPSV RQAIGRA+R GQ+K V+ Y L+ + E
Sbjct: 1322 ASTKACCEGITLIGASRVVLLDVVWNPSVGRQAIGRAYRIGQEKIVYTYNLITEGTKEKD 1381
Query: 890 FHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALY 944
++ KK+ + KL F S+ F L+Q I + D++LEA +++K ++
Sbjct: 1382 KYDRQAKKDHMSKLLF--SKEPHAAGFNLSQEVIFN--DKILEAMTSHRELKDMF 1432
>Os05g0392400 SNF2-related domain containing protein
Length = 450
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 226/425 (53%), Gaps = 35/425 (8%)
Query: 536 RDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLV 595
R LL P LL+LDEGHTPRN + + +L +V+T ++++LSGT FQN+ E++NIL LV
Sbjct: 21 RTILLENPGLLVLDEGHTPRNERSVIWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLV 80
Query: 596 RPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTL-------LNDDNFTR 648
RP+F +M +++ + + F++ E + + DDN +
Sbjct: 81 RPRFGEM---------FLTKTRVGRRHCVSKKQRDKFSDKYEKGVWASLTSNVTDDNAEK 131
Query: 649 KAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIE---AYEKFK 705
+R + K +H + G IL LPGL + + LK QK I+ K+E + F+
Sbjct: 132 -------VRSILKPFVHIHNGTILRTLPGLRECVIVLKPLPLQKSIIRKVENVGSGNNFE 184
Query: 706 RSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLAN 765
V + HP L ++ + + ++L D + + S +GVK +F ++ L
Sbjct: 185 HEYVISLASTHPSL--VNAINMTEEEASLIDKPMLERLRSNPY-EGVKTRFVMEVVRLCE 241
Query: 766 SAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNN-SAD 824
+ EK+L FSQ+I P++ ++ L K W GKEI + G R+ +++ FNN +D
Sbjct: 242 ALKEKVLIFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNNPDSD 301
Query: 825 AKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAAD 884
A+VL S +AC EGISL GASRV++LDV NP+V RQAI RAFR GQ+K V+ Y L+
Sbjct: 302 ARVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYTYNLITYG 361
Query: 885 SPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDD-----SEDELLEANAIRQD 939
+ E ++ +K+ + KL F + + L++ +++ SED++LE
Sbjct: 362 TGEGDKYDRQAEKDHLSKLVFSTEDEFSNVRNMLSKAEMEHCSKLISEDKVLEEMTSHDQ 421
Query: 940 IKALY 944
+K ++
Sbjct: 422 LKGMF 426
>Os07g0692600 SNF2-related domain containing protein
Length = 475
Score = 196 bits (497), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 234/449 (52%), Gaps = 35/449 (7%)
Query: 496 VEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDR--------LLMVPNLLI 547
++ L+ L W A S+L + Y F + D + R+R L+ P LLI
Sbjct: 21 MDSLDKLFKWHAHPSVLLMTYSSFLGMTKQD------SKVRNRYREFIAEVLMNNPGLLI 74
Query: 548 LDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRP 607
LDEGH PR+ ++ + L +V+T +++LSGT FQN+ E FN L L RP+F+ S
Sbjct: 75 LDEGHNPRSNKSKLRKLLMKVKTEFRILLSGTAFQNNFEEYFNTLCLARPRFIGDIMSEL 134
Query: 608 IARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYY 667
+ R V + + V AF E V + +D+ R + I L +LT+ + +
Sbjct: 135 VPERKRETVGRRA-KHQEAVARRAFVEKVGQKIESDNKHIR-SDGISLLNKLTRGFIDSF 192
Query: 668 KGDILDELPGLVDFSVFLKLSTKQKEIVHKIE----AYEKF--KRSAVGTALYIHPCLSE 721
+G L LPG+ ++VF+K + Q+E++ K+ +F + + T IHP L +
Sbjct: 193 EGAKLINLPGIHVYTVFMKPTDIQEEMLAKVTMPKLGSSRFPLEVELLITIGSIHPWLIK 252
Query: 722 ISEGDAADRASNLTDATVDSLIESII--IKDGVKAKFFFNILSLANSAGEKLLAFSQYIL 779
++ + + + A V +E G KAKF ++L ++ GE++L F +
Sbjct: 253 TTKAVS----TFFSPAEVKK-VERYKRDFAAGCKAKFVIDLLHKSSFRGERVLIFCHNVS 307
Query: 780 PMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFN--NSADAKVLFGSIKACGE 837
P+ FL +L+ GW +G+E+ ++ GD R MD+FN ++ KVL S AC E
Sbjct: 308 PITFLVKLIEMVFGWRLGEEVLVLQGDQELPVRSDVMDKFNGDSAGKRKVLIASTTACAE 367
Query: 838 GISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKK 897
GISL GASR+++LD N S TRQAI RAFR GQ++ V+VY LVA+ + E + + + +K
Sbjct: 368 GISLTGASRLVMLDSEWNHSKTRQAIARAFRRGQERTVYVYLLVASGTWEEEKYNSNRRK 427
Query: 898 EVIPKLWFEWSELCTTEDFKLNQV-DIDD 925
+ K+ F + +D N+V DIDD
Sbjct: 428 AWMSKMVFLGRYV---DDSSQNRVTDIDD 453
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/585 (26%), Positives = 265/585 (45%), Gaps = 113/585 (19%)
Query: 402 AKQMRPHQLEGFSFLVKNLV--------GDKPGGCILAHAPGSGKTFMLISFIQSFL--A 451
+ +++PHQ+ G F+ +N++ GDK GCILAH G GKTF +I+F+ + +
Sbjct: 712 SAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCI 771
Query: 452 KYPSARPLVVLPKGILGTWKREFQRW-QVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMS 510
+ L+V P +L WK+EF +W E PL Y ++ R +LK W +
Sbjct: 772 QLGLRTALIVTPVNVLHNWKKEFIKWCPAESKPLR-VYMLEDVPRANIQYLLKKWRIKGG 830
Query: 511 ILFLGYKQFSRIICGDG--DGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRV 568
+L +GY F + G D +A + L P++L+ DE H +NR D +LK+V
Sbjct: 831 VLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHIIKNRRADTTQALKQV 890
Query: 569 QTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVH 628
+T R++ L+G+ QN++ E + ++D VR +L SS R + + G H
Sbjct: 891 RTQRRIALTGSPLQNNLMEYYCMVDFVREGYLG--SSHEFRNRFQNPIE-------NGQH 941
Query: 629 DSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDIL-DELPGLVDFSVFLKL 687
++ ++ V+ ++N +++H+ L E K + +++ ++LP F V +KL
Sbjct: 942 TNSTSDDVK--IMN-----QRSHI---LYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKL 991
Query: 688 STKQKEIVHKIEAYEKFKRSAVG----------------TALYIHPCLSEISEGDAADRA 731
S Q+++ + F SA ++ HP L ++ A +
Sbjct: 992 SQLQRKLYRRFLDVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQM-----AKQK 1046
Query: 732 SNLTDATVDSLI------------------------------------------ESIIIK 749
NL V+S + E+++ +
Sbjct: 1047 GNLRQEDVESFLMDESSSDDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDE 1106
Query: 750 DGVKAKFF-------FNILSLANSAGEKLLAFSQYILPMKFLERLLVK-----RLG--WH 795
+ K + +ILS + G+K L FSQ + + +E L K + G W
Sbjct: 1107 NAYKEADYSGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWK 1166
Query: 796 VGKEIFMISGDTSADDREVAMDQFNNSADAKV--LFGSIKACGEGISLVGASRVIILDVH 853
GK+ + I G T + +R+ +++FN+ + +V S +A GI+L A+RVI+LD
Sbjct: 1167 QGKDWYRIDGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGS 1226
Query: 854 LNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKE 898
NP+ QAI R +R GQ K V+ YRL+A + E K ++ KE
Sbjct: 1227 WNPTHDLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKE 1271
>AK111184
Length = 1028
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 235/541 (43%), Gaps = 76/541 (14%)
Query: 392 VSDIAIHPRHAKQMRPHQLEGFSFLVKNLVG-----DKPGGCILAHAPGSGKTFMLISFI 446
V D+ + P+ AK +RPHQ+EG FL + ++G +K G ILA G GKT I+ +
Sbjct: 311 VVDVVLDPQLAKALRPHQIEGVKFLYERVMGMHADGEKGQGAILADKMGLGKTLQTIALV 370
Query: 447 QSFLAK---YPSA-----RPLVVLPKGILGTWKREFQRW-QVEDIPLYDFYSVKADKRVE 497
+ L + Y A R ++V P ++ WKREF++W + + + + V
Sbjct: 371 LTLLKQSCYYTPASCTIERAIIVCPLTLVKNWKREFKKWIGTSALNVLCIDEGRGCQDVA 430
Query: 498 QLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVP-NLLILDEGHTPRN 556
+ KS+ +L +GY++ C+D P L++ DEGH ++
Sbjct: 431 RFVRSKSYH----VLVIGYEKLR-------------TCKDLFKDAPVGLIVCDEGHRLKS 473
Query: 557 RETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQV 616
+E + RK++LSGT QN +SE F ++D V P L +S ++
Sbjct: 474 KEAKTTQMFDELSAERKIILSGTPIQNDLSEFFAMIDFVAPGMLNSYAS-------FKKI 526
Query: 617 AISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDE-L 675
+ I + H S T++ T +A +L +T D++ DIL L
Sbjct: 527 SEEPIMRSRAQHCSKHTKA-----------TGQARA-SALMTITNDIILRRTADILSNFL 574
Query: 676 PGLVDFSVFLKLSTKQKEIVHKIEAYEKFK---RSAVGTALYIHPCLSEI---------- 722
P + +F S +Q I I A + R G L L ++
Sbjct: 575 PPKKEMVLFCSPSPEQIRIYQSILASNDVRSLLRGDAGNGLLQIGVLRKLCNTPELLLRD 634
Query: 723 SEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANS----AGEKLLAFSQYI 778
SE D L + + D + ++ L +K++ S +
Sbjct: 635 SEADGTSAIKALVGDMARYFPPNFVRNDARFSGKLVCVMQLLEKLRAETDDKVVLVSNFT 694
Query: 779 LPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFN-NSADAKVLF-GSIKACG 836
+ +E ++ K+ ++ + G T D+R ++QFN + D+ +F S K+ G
Sbjct: 695 STLDIVEAMMRKKRYSYL-----RLDGKTPQDERMDMVNQFNRDGVDSSFVFLLSAKSGG 749
Query: 837 EGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFK 896
G++L+GA+R++++D NPS QA+ R R GQ+K ++YRL+ + + + K ++
Sbjct: 750 VGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKVCYIYRLLLSGTMDEKIYQRQIS 809
Query: 897 K 897
K
Sbjct: 810 K 810
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 218/531 (41%), Gaps = 93/531 (17%)
Query: 405 MRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPK 464
+ P+QLEG +FL + +K IL G GKT I+F+ S LVV P
Sbjct: 261 LHPYQLEGLNFLRYSWYHNK--RVILGDEMGLGKTIQSIAFLGSLFVDKLGPH-LVVAPL 317
Query: 465 GILGTWKREFQRW--------------QVEDIPLYDFYSVKADKRVEQL-------EVLK 503
L W+REF W E I Y+FY K + + E K
Sbjct: 318 STLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKK 377
Query: 504 SWEAQMSILFLGYKQFSRIICGDGD--GNIAAACRDRLLMVPNLLILDEGHTPRNRETDV 561
+ +L Y+ +I D I C +I+DEGH +N+++ +
Sbjct: 378 QSRIKFDVLLTSYE----MINMDSTVLKTIEWEC----------MIVDEGHRLKNKDSKL 423
Query: 562 LASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGI 621
LK T +V+L+GT QN++ E+F ++ FL+ +S IA
Sbjct: 424 FGQLKEYHTKHRVLLTGTPVQNNLDELFMLM-----HFLEGDSFGSIA------------ 466
Query: 622 RSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDF 681
E +D +N D K H + L +L +K D++ ELP +
Sbjct: 467 ---------DLQEEFKD--INQDKQVEKLHGM-----LKPHLLRRFKKDVMKELPPKKEL 510
Query: 682 SVFLKLSTKQKEIVHKI--EAYEKFKR------SAVGTALYIHPCLSEISEGDAADRASN 733
+ ++L++KQKE I + YE R S + + + D + +N
Sbjct: 511 ILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPAN 570
Query: 734 LTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLG 793
+A + L+ES K + ++ G ++L +SQ+ + LE L R
Sbjct: 571 SEEA-LRRLLES-----SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYR-K 623
Query: 794 WHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDV 852
W + I G +R++ +D+FN + F S +A G GI+L A VII D
Sbjct: 624 WSYER----IDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDS 679
Query: 853 HLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKL 903
NP QA+ RA R GQ KV +YRLV+ + E + + KK V+ L
Sbjct: 680 DWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHL 730
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 225/511 (44%), Gaps = 57/511 (11%)
Query: 401 HAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLV 460
H + +QL+G +L+ N + ILA G GKT ++ F+ + + +A P +
Sbjct: 530 HCGALYDYQLQGLQWLIDNFKTRR--SVILADEMGLGKTVQVVCFLYHIIKESLTASPAL 587
Query: 461 VL-PKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQF 519
+L PK IL W++EF +W D+ + + + ++ Q+ + S + G F
Sbjct: 588 ILAPKSILLQWEKEFCQW-ASDLNVIVYQGDRDSRKCIQVHEMYSSD--------GKPLF 638
Query: 520 SRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGT 579
++ I A + + +++DE H + + ++ A LKR + +++L+GT
Sbjct: 639 DALVTSYEFVQIDKAVLQKFKW--STIVIDEAHRMKKLDCNLAACLKRYCSEFRLLLTGT 696
Query: 580 LFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDT 639
QN++ E+F++L + P E S P A + S + ES D
Sbjct: 697 PLQNNIMELFSLLHYIDPD----EFSDPKADGLFSPI-----------------ESGRD- 734
Query: 640 LLNDDNFTRKAHVI--RSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHK 697
L D+ R +++ R LR + DVL D +P V L+ Q+E+
Sbjct: 735 LTMDEKVARIHNILKPRMLRRMKSDVL-------TDSMPVKKWVEVPCALADSQRELYIN 787
Query: 698 I--EAYEKFKRSAV--GTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVK 753
I Y K SA+ G L ++ L E+ + + + + S+I G K
Sbjct: 788 ILERNYSKLN-SAIRNGRKLSLNNILMELRKCCNHPVGLEVGQQATEDVFLSLIASSG-K 845
Query: 754 AKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDRE 813
+ +L G ++L FSQ + LE L LG+ + I G TS R+
Sbjct: 846 LQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCS-LGYKYAR----IDGQTSLSARQ 900
Query: 814 VAMDQFNN-SADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQ 872
+++++ N ++ + S +A G G+ L GA RVII D NP + QA RA R GQ
Sbjct: 901 ESIEEYKNIDSETFIFLMSTRAGGMGVDLPGADRVIIYDPDFNPFMDLQAQSRAHRIGQT 960
Query: 873 KKVFVYRLVAADSPEVKFHETAFKKEVIPKL 903
+ V VY+L+ S E K + + +K I +
Sbjct: 961 RPVVVYQLITKCSVEEKILQKSKQKLAIENM 991
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 211/493 (42%), Gaps = 69/493 (13%)
Query: 435 GSGKTFMLISFIQSFLAKYPSARP-LVVLPKGILGTWKREFQRWQVEDIPLYDFY-SVKA 492
G GKT +F+ S +Y P LV++P + W EF W + + +++ S +A
Sbjct: 3 GLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASW-APHLNVVEYHGSARA 61
Query: 493 DKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGH 552
+ Q E + +QM + +K + + AA R + +LI+DEGH
Sbjct: 62 RSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRS---VSWEVLIVDEGH 118
Query: 553 TPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRI 612
+N + + + L + +V+L+GT QN++ E++N+L+ ++P +S P
Sbjct: 119 RLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQP------ASFP----- 167
Query: 613 MSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDIL 672
SL ++F E ND T K +++L + +L K D +
Sbjct: 168 ----------SL-----ASFEEK-----FNDLTTTEKVEELKNL--VAPHMLRRLKKDAM 205
Query: 673 DELPGLVDFSVFLKLSTKQKEIVHKI--EAYEKFKRSAVGTA-------------LYIHP 717
+P + V ++L++ Q E + + Y+ + G A + HP
Sbjct: 206 QNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHP 265
Query: 718 CLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQY 777
L +E ++ + + IK K ++L + + G ++L FSQ
Sbjct: 266 YLIPGTEPESGS----------PEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQM 315
Query: 778 ILPMKFLERLLVKRLGWHVGKEIF-MISGDTSADDREVAMDQFNNSADAKVLFGSIKACG 836
+ LE L W G + F + G S +R+ A+ +FN V S ++CG
Sbjct: 316 TKLLDILEDYLT----WEFGPKTFERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCG 371
Query: 837 EGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFK 896
GI+L A VII D NP QA+ RA R GQ ++ VYRLV S E + A K
Sbjct: 372 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKK 431
Query: 897 KEVIPKLWFEWSE 909
K ++ +L+ SE
Sbjct: 432 KLMLDQLFVNKSE 444
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 133/565 (23%), Positives = 230/565 (40%), Gaps = 134/565 (23%)
Query: 408 HQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAK-----------YPSA 456
HQ +G FL NL + GG +L G GKT I+F+ + + K A
Sbjct: 135 HQRDGVRFLY-NLYRNNHGG-VLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGRKIA 192
Query: 457 RPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGY 516
L++ P ++ W+ EF W + +Y + D ++++E ++ I+ +
Sbjct: 193 PILILCPTSVIRNWENEFAEWARCSVAVY--HGPNRDLVLQKVET-----QRLEIVITSF 245
Query: 517 KQF---SRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRK 573
F +I+CG + +L+++DE H +N ++ + + + T ++
Sbjct: 246 DTFRIHGKILCG---------------ISWDLVVVDEAHRLKNEKSKLYTACLEITTRKR 290
Query: 574 VVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFT 633
L+GT+ QN + E+FN+ D + P L R R + LK H F+
Sbjct: 291 FGLTGTIMQNKIMELFNLFDWIVPGCL---GDREHFRVYYDE-------PLK--HGQRFS 338
Query: 634 ESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELP-GLVDFSVFLKLSTKQK 692
+ D RK H++ L +K +L K + + L G D VF ++S QK
Sbjct: 339 APERFVQVAD---KRKKHLVSVL---SKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQK 392
Query: 693 EIVHK----------------------IEAYEKFKRSAVGTAL--YIH------------ 716
+ + + E KR+ + Y+H
Sbjct: 393 RVYRRMLQQPDVQILINKDLPCSCGSPLTQVECCKRTEPHGIIWSYLHRDNPEGCSLCPF 452
Query: 717 ----PCLSEIS---------------EGDAADRASNLTDATVDSLIESIIIKDGVKAKFF 757
PCL ++ E + + + L A D+ IE ++ G K++ F
Sbjct: 453 CLVLPCLGKLQQISNHLELIKPNLKDEIEKQKKDAELAAAVFDTDIE--LVGGGAKSENF 510
Query: 758 FNI---------------LSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFM 802
+ LSL G+K+L FS + + LE+ L+++ G
Sbjct: 511 MGLSDAEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRK-----GYCFSR 565
Query: 803 ISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQA 862
G T + R++ +D+FN +V S +A G++LV A+RV+I D NP+ QA
Sbjct: 566 FDGTTPMNARQLLIDEFNRCPSKQVFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQA 625
Query: 863 IGRAFRPGQQKKVFVYRLVAADSPE 887
R+FR GQ++ V V+RL+ A S E
Sbjct: 626 QDRSFRFGQRRHVTVFRLLGAGSLE 650
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 232/550 (42%), Gaps = 66/550 (12%)
Query: 375 DADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAP 434
D D++ G+ ++++ + + I Q+ +Q G +L + L + GG I+
Sbjct: 342 DEDQVTEGSDELTDVTLEGGLRIPGTLYTQLFDYQKVGVQWLWE-LHCQRAGG-IIGDEM 399
Query: 435 GSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRW----QVEDIPLYDFYSV 490
G GKT ++SF+ S +VV P +L W+RE RW +VE + S
Sbjct: 400 GLGKTVQVLSFLGSLHNSGLYKPSIVVCPVTLLQQWRREASRWYPKFKVEILHDSANSSS 459
Query: 491 KADKRVEQLEVLKSWEAQMSILFLGYKQ-------FSRIICGDGDGNIAAACRDRLLMVP 543
K KR + SW++ K SR++ G G + ++
Sbjct: 460 KKSKRSSDSDSEASWDSDQEEAVTCSKPAKKWDDLISRVVSS-GSGLLLTTYEQLRILGE 518
Query: 544 NLL-------ILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVR 596
LL +LDEGH RN ++ K++QT +++++G QN +SE++++ D V
Sbjct: 519 KLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVF 578
Query: 597 PKFL------KMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKA 650
P L + E S PI ++ G ++ T L R A
Sbjct: 579 PGKLGVLPVFEAEFSVPI--------------TVGGYANA--------TPLQVSTAYRCA 616
Query: 651 HVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVG 710
V+R L + +L K D+ +LP + +F L+T+Q+ A + ++ G
Sbjct: 617 VVLRDL--VMPYLLRRMKADVNAQLPKKTEHVLFCSLTTEQRATYRAFLASSEVEQIFDG 674
Query: 711 T--ALYIHPCLSEI-SEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSA 767
+LY L +I + D +R + + S K K +L +
Sbjct: 675 NRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGNPERS------GKMKVVEQVLKVWKEQ 728
Query: 768 GEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKV 827
G ++L F+Q + +E L + + G T A R +D+FNN+ + +
Sbjct: 729 GHRVLLFTQTQQMLDIMENFLTA-----CEYQYRRMDGLTPAKQRMALIDEFNNTDEIFI 783
Query: 828 LFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPE 887
+ K G G +L GA+R+II D NPS QA RA+R GQ + V VYRL+ + E
Sbjct: 784 FILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIE 843
Query: 888 VK-FHETAFK 896
K +H +K
Sbjct: 844 EKVYHRQIYK 853
>Os02g0762800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 879
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 215/547 (39%), Gaps = 89/547 (16%)
Query: 403 KQMRPHQLEGFSFLVKNLVG----DKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARP 458
+ +RPHQ EG F+ + G D GCILA G GKT I+ + + L + A+P
Sbjct: 233 RYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKP 292
Query: 459 LV-----VLPKGILGTWKREFQRWQVEDIPLYDFY-SVKADKRVEQLEVLKSWEAQMSIL 512
+V V P ++ W+ E +W + L S +AD + +E +++ +L
Sbjct: 293 MVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADV-LSGIESFLKPLSRLQVL 351
Query: 513 FLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPR 572
+ Y+ F +C +LLI DE H +N +T +L + R
Sbjct: 352 IVSYETFRM---HSSKFERPGSC--------DLLICDEAHRLKNDQTLTNKALAALPCKR 400
Query: 573 KVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAF 632
+++LSGT QN + E F++++ P L RR I G
Sbjct: 401 RILLSGTPMQNDLEEFFSMVNFTNPGVL---GDATYFRRYYEAPIICGREP--------- 448
Query: 633 TESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQK 692
T S E+ L + R A + + +L + + LP + V KL
Sbjct: 449 TASAEEKNLGSE---RSAELSAKVNLF---ILRRTNALLSNHLPPKIVEVVCCKL----- 497
Query: 693 EIVHKIEAYEKFKRSAVGTALYIHPCLSE-----ISEGDAADRASNLTDATVDSLIESII 747
+A+ TALY H S+ ISEG + A +
Sbjct: 498 --------------TALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKL 543
Query: 748 IKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERL------LVKRLGWHVGKEIF 801
I D +K+ NS G ++ P F R L +L
Sbjct: 544 IYDTIKSN---------NSGGSGFDDCLRFFPPELFSGRSGFVTLDLFAQLCRERRYPYI 594
Query: 802 MISGDTSADDREVAMDQFNN-SADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTR 860
+ G TS + R+ ++QFN+ S D V S KA G G++LVG +R+I+ D NP+ +
Sbjct: 595 RLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDK 654
Query: 861 QAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTT---EDFK 917
Q R Q K + +++ + + K ++ E + L F + E + E+ K
Sbjct: 655 QVYQR-----QMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDL-FTFHEQIRSEIHENLK 708
Query: 918 LNQVDID 924
N+ + D
Sbjct: 709 CNRCNKD 715
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 227/532 (42%), Gaps = 98/532 (18%)
Query: 404 QMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYP--SARPLVV 461
+MR +QL G ++L++ L + G ILA G GKT IS + +L ++ + +VV
Sbjct: 284 KMRDYQLAGLNWLIR-LYENGING-ILADEMGLGKTLQTISLL-GYLHEFRGITGPHMVV 340
Query: 462 LPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLG------ 515
PK LG W +E QR+ VL++ I FLG
Sbjct: 341 APKSTLGNWMKEIQRF---------------------CPVLRA------IKFLGNPEERN 373
Query: 516 YKQFSRIICGDGDGNIAA---ACRDRLLMVP---NLLILDEGHTPRNRETDVLASLKRVQ 569
+ + + ++ G D + + A +++ + +I+DE H +N + + +++
Sbjct: 374 HIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYN 433
Query: 570 TPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHD 629
T +++++GT QN++ E++++L+ + P+ I S D
Sbjct: 434 TNYRLLITGTPLQNNLHELWSLLNFLLPE----------------------IFSSAETFD 471
Query: 630 SAFTESVEDTLLNDDNFTRKAHVIRSLRELTKD-VLHYYKGDILDELPGLVDFSVFLKLS 688
F S E ND + V++ L ++ + +L K D+ LP + + + +S
Sbjct: 472 DWFQISGE----NDQH-----EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMS 522
Query: 689 TKQKEI--------VHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVD 740
QK+ + + A + KR + A+ + C + A+ T T D
Sbjct: 523 EMQKQYYRALLQKDLEVVNAGGERKR-LLNIAMQLRKCCNHPYLFQGAEPGPPYT--TGD 579
Query: 741 SLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEI 800
LIE + K +L ++L FSQ + LE L+ + G +
Sbjct: 580 HLIE-----NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-----YKGYQY 629
Query: 801 FMISGDTSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDVHLNPSVT 859
I G+T +DR+ +++ FN K +F S +A G GI+L A VI+ D NP V
Sbjct: 630 CRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVD 689
Query: 860 RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELC 911
QA RA R GQ+K+V V+R + E K E A+KK + L + L
Sbjct: 690 LQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA 741
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 749 KDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTS 808
KD K IL EK + FSQ+ LE ++ G + G S
Sbjct: 495 KDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQK-----GIKFLRFDGKLS 549
Query: 809 ADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFR 868
RE + +F+ S D VL S+KA G G++L AS V ++D NP+V QAI R R
Sbjct: 550 QKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHR 609
Query: 869 PGQQKKVFVYRLVAADSPEVKFHET-AFKKEVI 900
GQ++ V V R + D+ E + + A K+ +I
Sbjct: 610 IGQKRAVQVRRFIVKDTVEERMQKVQACKQRMI 642
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 770 KLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLF 829
++L FSQ + LE L+ R G + I G+T +DR+ +++ FN K +F
Sbjct: 550 RVLIFSQMTRLLDILEDYLMYR-----GYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVF 604
Query: 830 G-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEV 888
S +A G GI+L A V++ D NP QA RA R GQ+K+V V+R + E
Sbjct: 605 LLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEE 664
Query: 889 KFHETAFKKEVIPKLWFEWSELC 911
K E A+KK + L + L
Sbjct: 665 KVIERAYKKLALDALVIQQGRLA 687
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,247,163
Number of extensions: 1318128
Number of successful extensions: 3501
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 3461
Number of HSP's successfully gapped: 22
Length of query: 946
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 836
Effective length of database: 11,292,261
Effective search space: 9440330196
Effective search space used: 9440330196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)