BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0188000 Os06g0188000|AK066305
(245 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0188000 Similar to Cyclic nucleotide-gated channel C (... 478 e-135
Os02g0789100 Cyclic nucleotide-binding domain containing pr... 349 9e-97
Os12g0163000 Similar to Cyclic nucleotide-gated channel A (... 324 3e-89
Os09g0558300 Similar to Cyclic nucleotide-gated channel A (... 320 5e-88
Os06g0527100 Similar to Cyclic nucleotide-gated channel A (... 288 3e-78
Os02g0255000 Similar to Cyclic nucleotide-gated ion channel... 288 4e-78
Os04g0643600 Similar to Cyclic nucleotide-gated channel C (... 287 6e-78
Os02g0627700 Similar to Cyclic nucleotide-gated channel A (... 281 4e-76
Os03g0646300 Similar to Cyclic nucleotide-gated channel A (... 272 1e-73
Os08g0254600 Cyclic nucleotide-binding domain containing pr... 246 9e-66
Os01g0782700 Similar to Cyclic nucleotide-gated ion channel... 176 2e-44
Os05g0502000 Similar to Cyclic nucleotide-gated ion channel... 173 1e-43
Os03g0758300 Similar to Cyclic nucleotide-gated ion channel... 166 2e-41
Os02g0773400 Ion transport domain containing protein 144 8e-35
>Os06g0188000 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 245
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/245 (95%), Positives = 234/245 (95%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV
Sbjct: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS
Sbjct: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR
Sbjct: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
Query: 181 RYKRRRLAKDLSIXXXXXXXXXXXDDGSPEHSLVLNAVRKGAHIIKELPKFRKPSEPDFS 240
RYKRRRLAKDLSI DDGSPEHSLVLNAVRKGAHIIKELPKFRKPSEPDFS
Sbjct: 181 RYKRRRLAKDLSIRESFFSRRSFEDDGSPEHSLVLNAVRKGAHIIKELPKFRKPSEPDFS 240
Query: 241 AEHDD 245
AEHDD
Sbjct: 241 AEHDD 245
>Os02g0789100 Cyclic nucleotide-binding domain containing protein
Length = 480
Score = 349 bits (896), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 189/228 (82%), Gaps = 7/228 (3%)
Query: 22 LCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIVREGDPVTEMLFIIRGKLESST 81
L + VPFFSQMD QLLDAICERLVSSL T GTYIVREGDPVTEMLFIIRGKLESST
Sbjct: 250 LLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESST 309
Query: 82 TDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPSSTRTVKTIVEVEAFALRAEDL 141
T+GGRTGFFNS TLK+GDFCGEELLGWALVPKPTVNLPSSTRTVK ++EVEAFAL+AEDL
Sbjct: 310 TNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDL 369
Query: 142 KFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWRRYKRRRLAKDLSIXXXXXXX- 200
KFVA+QFRRLHS++LQHTFRYYSHHWRTWA+CFIQAAWRRYKRR++A+DLS+
Sbjct: 370 KFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMR 429
Query: 201 ---XXXXDDGSPEHSL---VLNAVRKGAHIIKELPKFRKPSEPDFSAE 242
DD P+ +L +++ RKG +KELPK RKP EPDFSAE
Sbjct: 430 SDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAE 477
>Os12g0163000 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 648
Score = 324 bits (831), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 148/192 (77%), Positives = 174/192 (90%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDEESIL++LP DLRR+I+RHLCL LV RVPFFSQMD QLLDAICERLVSSLST YIV
Sbjct: 355 VDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSLSTKDAYIV 414
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPV+EMLF+IRG+LESSTTDGGRT FF+SITL+ GDFCGEELL WAL+P P++N P
Sbjct: 415 REGDPVSEMLFVIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWALMPNPSLNFPQ 474
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTV+++ EVEAFALRAEDLK+VA+QF+RLHS++LQH FRYYSH WR+W ACF+Q AWR
Sbjct: 475 STRTVRSVTEVEAFALRAEDLKYVANQFKRLHSKRLQHAFRYYSHQWRSWGACFVQGAWR 534
Query: 181 RYKRRRLAKDLS 192
RYK+R+LA++LS
Sbjct: 535 RYKKRKLARELS 546
>Os09g0558300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 713
Score = 320 bits (821), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 163/264 (61%), Positives = 193/264 (73%), Gaps = 19/264 (7%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
V+EESIL+ALPAD+RRD++RHLCLDLV RVPFFS+MD QLLDAICERLVS L TYI
Sbjct: 450 VEEESILQALPADIRRDVQRHLCLDLVRRVPFFSEMDYQLLDAICERLVSFLCPERTYIS 509
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPV EMLF+IRGKLESSTT+GGR+ FFNSI L+ GDF GEELL WAL+PK V+ P
Sbjct: 510 REGDPVNEMLFVIRGKLESSTTNGGRSNFFNSIILRPGDFAGEELLTWALLPKTNVHFPL 569
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTV+++ EVEAFALRAEDLKFVA+QFRRLHS+KLQHTFR+YSHHWRTWAACFIQAAWR
Sbjct: 570 STRTVQSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWR 629
Query: 181 RYKRRRLAKDLSIXXXX---------XXXXXXXDDGSPEHSLVLNAVRKGAHIIKELPKF 231
+++RR+LA+ LS S ++ +A+ + +F
Sbjct: 630 QHQRRKLAESLSRWESYSWWPEEHPPADKPKQEGTSSSTKTIAESAIAQMHKFASASRRF 689
Query: 232 R----------KPSEPDFSAEHDD 245
R KP EPDFSA+H D
Sbjct: 690 RADDTAIRRLQKPDEPDFSADHFD 713
>Os06g0527100 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 694
Score = 288 bits (736), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 177/262 (67%), Gaps = 19/262 (7%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDEE +L LP DLRR IKRHLCL L+ RVP F MD QLL+A+C+RL L T G+ I+
Sbjct: 434 VDEELLLMNLPKDLRRAIKRHLCLSLLMRVPMFENMDDQLLNALCDRLKPVLYTEGSCII 493
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
RE DPV EMLFI+RG L S TT+GGRTGFFNS LK GDFCGEELL WAL P +LPS
Sbjct: 494 REEDPVNEMLFIMRGNLMSMTTNGGRTGFFNSDVLKGGDFCGEELLTWALDPTSVSSLPS 553
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTVKT+ EVEAFALRAEDLKFVA+QFRRLHS++LQHTF++YS HWRTWAACFIQAAW
Sbjct: 554 STRTVKTMSEVEAFALRAEDLKFVATQFRRLHSKQLQHTFKFYSQHWRTWAACFIQAAWH 613
Query: 181 RYKRRRLAKDLSIXXXXXXXXXXXDD----------------GSPEHSLVLNAVRKGAHI 224
RY R+++ L D G+ L NA RK A +
Sbjct: 614 RYCRKKIEDSLREKEKRLQFAIVNDGATTLSFRAAIYASRFAGNMMRILRRNATRK-ARL 672
Query: 225 IKELPK--FRKPSEPDFSAEHD 244
+ +P +KP+EP+F+AE
Sbjct: 673 KESVPARLLQKPAEPNFAAEEQ 694
>Os02g0255000 Similar to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic
nucleotide-and calmodulin-regulated ion channel 1)
Length = 299
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 178/260 (68%), Gaps = 19/260 (7%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDEE +L LP +LRR+IKRHLCL L+ RVP F MD +LLDA+C+RL L T G+ I+
Sbjct: 39 VDEEGLLSNLPKNLRREIKRHLCLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCII 98
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPV EMLFI+RG LES TT+GG+TGFFNS +K GDFCGEELL WAL P NLPS
Sbjct: 99 REGDPVNEMLFIMRGNLESMTTNGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPS 158
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTVKT+ EVEAFALRA+DLKFVA+QFRRLHS++LQHTFR+YS WRTWAACFIQAAW
Sbjct: 159 STRTVKTLSEVEAFALRADDLKFVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWH 218
Query: 181 RYKRRRLAKDL----------------SIXXXXXXXXXXXDDGSPEHSLVLNAVRKGAHI 224
RY R++L L S G+ L NA RK A +
Sbjct: 219 RYCRKKLEDTLFEKEKRLQAAIVSDGSSSLSLGAALYASRFAGNMMRILRRNATRK-ARL 277
Query: 225 IKELPK--FRKPSEPDFSAE 242
+ +P +KP+EP+F AE
Sbjct: 278 QERVPARLLQKPAEPNFFAE 297
>Os04g0643600 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 252
Score = 287 bits (734), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 173/253 (68%), Gaps = 12/253 (4%)
Query: 4 ESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIVREG 63
E++++ LP DLRRDIKRHLCL LV RVP F MD +LLDAICERL +L T YI+REG
Sbjct: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
Query: 64 DPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPSSTR 123
DPV EM FI+ G LES TTDGGR+GFFN + LK G FCG+ELL WAL PK N P+STR
Sbjct: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
Query: 124 TVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWRRYK 183
TVK + EVEAFAL AE+LKFVASQFRRLHSR++QHTFR+YS HWRTWAACFIQAAWRRY
Sbjct: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
Query: 184 RRRLAKDLSIXXXXXXXXXXXDDGSPEHSLVLNAVRKGAHIIKELPKFR----------- 232
+R++A+ P + + A R A+ ++ + + R
Sbjct: 181 KRKMAEQ-HRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLP 239
Query: 233 KPSEPDFSAEHDD 245
KP EPDF+ + D
Sbjct: 240 KPPEPDFAVDEAD 252
>Os02g0627700 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 686
Score = 281 bits (718), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/245 (58%), Positives = 174/245 (71%), Gaps = 13/245 (5%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDEE++L+ LP D+RRDIKRHLCLDLV RVP F +MD ++L+AICERL +L T GT +V
Sbjct: 455 VDEEALLEDLPMDIRRDIKRHLCLDLVRRVPLFDEMDERMLEAICERLRPALYTRGTRLV 514
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
RE DPV MLFIIRG L+S TT GGR+GFFNS + G+FCGEELL WAL P+P +LP
Sbjct: 515 RELDPVDSMLFIIRGYLDSYTTQGGRSGFFNSCRIGAGEFCGEELLPWALDPRPAASLPL 574
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTV+ + EVEAFAL A+DL+FVASQFRRLHS +++H FR+YSH WRTWAACFIQAAWR
Sbjct: 575 STRTVRAVSEVEAFALVADDLRFVASQFRRLHSARIRHRFRFYSHQWRTWAACFIQAAWR 634
Query: 181 RYKRRRLAKDLSIXXXXXXXXXXXDDGSPEHSLVLNAVRKGAHIIKELPKFRKPSEPDFS 240
R KRRR + +L + + P S VR H +KP EPDF+
Sbjct: 635 RNKRRRASMELRM--------REGGEARPGGS-----VRCRRHSCDGKALIKKPMEPDFT 681
Query: 241 AEHDD 245
E +D
Sbjct: 682 VEEED 686
>Os03g0646300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 696
Score = 272 bits (696), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/244 (56%), Positives = 172/244 (70%), Gaps = 6/244 (2%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDEE ++ LP DLRRDIKRHLCL LV RVP F+ MD +LLDAICERL +L T T+I+
Sbjct: 458 VDEEVLVANLPKDLRRDIKRHLCLGLVRRVPLFANMDERLLDAICERLRPALYTERTFII 517
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPV +MLFIIRG LES TTDGGR+GFFN L+ DFCGEELL WAL PK ++LPS
Sbjct: 518 REGDPVDQMLFIIRGCLESITTDGGRSGFFNRSLLEESDFCGEELLTWALDPKAGLSLPS 577
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
STRTV+ + EVEAFAL +++LKFVA QFRR+HS+++QHTFR+YS WRTWAA +IQAAWR
Sbjct: 578 STRTVRALSEVEAFALHSDELKFVAGQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWR 637
Query: 181 RY-KRRRLAKDLSIXXXXXXXXXXXDDGSPEHSLVLNAVRKGAHIIKELPKFRKPSEPDF 239
R+ KRR + + + H + R ++ +P KPSEPDF
Sbjct: 638 RHLKRRAIRSSTGLKTTMLVSRFAANAMRGVHR--QRSRRADEVLMMPMP---KPSEPDF 692
Query: 240 SAEH 243
A++
Sbjct: 693 GADY 696
>Os08g0254600 Cyclic nucleotide-binding domain containing protein
Length = 230
Score = 246 bits (629), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 154/227 (67%), Gaps = 13/227 (5%)
Query: 29 RVPFFSQMDGQLLDAICERLVSSLSTVGTYIVREGDPVTEMLFIIRGKLESSTTDGGRTG 88
+VPFFS MD QLLDAICER+ L T GTYI REGDPV MLFIIRGKLESSTTDGGRTG
Sbjct: 2 QVPFFSAMDHQLLDAICERMTYFLRTEGTYITREGDPVKVMLFIIRGKLESSTTDGGRTG 61
Query: 89 FFNSITLKTGDFCGEELLGWALVPKPTVNLPSSTRTVKTIVEVEAFALRAEDLKFVASQF 148
FFNSI LK GDFCGEELL WAL+P + PSSTRTVKTI E+EAF+L+A+D+K VAS F
Sbjct: 62 FFNSIILKPGDFCGEELLTWALLPSSRDSYPSSTRTVKTIAELEAFSLQADDIKCVASTF 121
Query: 149 RRLHSRKLQHTFRYYSHHWRTWAACFIQAAWRRYKRRRLAKDLSIXXXXXXXXXXXDDGS 208
R +HS+ LQHTFR +S+ WRTWAA FIQ+AWRR + R+ ++ + +D +
Sbjct: 122 RMMHSKHLQHTFRLHSYQWRTWAARFIQSAWRRRQNRQKMAEVGLSNRWKSFFSLVNDFN 181
Query: 209 PEHSLVLNA------------VRKGAHIIKELPKFRKPSEPDFSAEH 243
+N V K A I K+ K R P EPDFS +H
Sbjct: 182 DTRCEDINGSSSTVSHRETVTVSKIASIFKKAQKER-PEEPDFSEDH 227
>Os01g0782700 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 666
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 3/193 (1%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDE I++ LP LRRDIK HLCLDLV +VP F MD +L+ IC+R+ S + G IV
Sbjct: 437 VDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIV 496
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPV MLFI+RG L+SS RTG + TL G+F G+ELL W + LP+
Sbjct: 497 REGDPVQRMLFIVRGHLQSSQVL--RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPA 554
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSR-KLQHTFRYYSHHWRTWAACFIQAAW 179
S+ T+ T+ EAF L A D+K+V FR + +++ + RYYSH WRTWAA +Q AW
Sbjct: 555 SSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAW 614
Query: 180 RRYKRRRLAKDLS 192
RRYK R+ LS
Sbjct: 615 RRYKHRKTLASLS 627
>Os05g0502000 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 691
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 119/193 (61%), Gaps = 3/193 (1%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
VDE I++ LP LRRDIK HLCLDLV +VP F MD +L+ IC+R+ S + G IV
Sbjct: 464 VDECQIVRDLPEGLRRDIKYHLCLDLVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIV 523
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
REGDPV MLFI+RG L+ S R G + TL G+F G+ELL W + LP+
Sbjct: 524 REGDPVQRMLFIVRGHLQCSQVM--RNGATSWCTLGPGNFSGDELLSWCMRRPFMERLPA 581
Query: 121 STRTVKTIVEVEAFALRAEDLKFVASQFR-RLHSRKLQHTFRYYSHHWRTWAACFIQAAW 179
S+ T+ T EAF L A D+K+V FR S K++ + RYYSH WRTWAA +Q AW
Sbjct: 582 SSSTLVTAESTEAFGLEAGDVKYVTQHFRYTFTSDKVRRSARYYSHGWRTWAAVAVQLAW 641
Query: 180 RRYKRRRLAKDLS 192
RRYK R+ LS
Sbjct: 642 RRYKHRKTLASLS 654
>Os03g0758300 Similar to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic
nucleotide-and calmodulin-regulated ion channel 2)
(DEFENSE NO DEATH 1)
Length = 618
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Query: 2 DEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIVR 61
+E ++K LP LRRDIKR+LCL+LV +VP F MD +LD IC+RL + + G ++R
Sbjct: 395 EEMEMIKDLPEGLRRDIKRYLCLELVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIR 454
Query: 62 EGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPSS 121
EGDPV M+F+++GKL S T G + L G+F G+ELL W L LP+S
Sbjct: 455 EGDPVQRMVFVLQGKLRS--TQPLAKGVVATCMLGAGNFLGDELLSWCLRRPSLDRLPAS 512
Query: 122 TRTVKTIVEVEAFALRAEDLKFVASQFR-RLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
+ T + + +AF L A DL+F+ QFR + + KL+ T RYYS +WRTWAA IQ AWR
Sbjct: 513 SATFECVETAQAFCLDAPDLRFITEQFRYKFANEKLKRTARYYSSNWRTWAAVNIQLAWR 572
Query: 181 RYKRR 185
RYK R
Sbjct: 573 RYKAR 577
>Os02g0773400 Ion transport domain containing protein
Length = 772
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 118/201 (58%), Gaps = 21/201 (10%)
Query: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
V+EE +L LP D++RDI+RH + +V F+ MD +LDAIC++L +L G+ I+
Sbjct: 551 VNEEELLSNLPEDIQRDIRRHF-FRFLNKVRLFTLMDWPILDAICDKLRQNLYISGSDIL 609
Query: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
+G PV +M+FI+RGKLES + DG + L GD CGEELL W L + N
Sbjct: 610 YQGGPVEKMVFIVRGKLESISADGSKA------PLHEGDVCGEELLTWYL-EHSSANRDG 662
Query: 121 -----------STRTVKTIVEVEAFALRAEDLKFVASQFRR-LHSRKLQHTFRYYSHHWR 168
+ RTV+ + VEAF LRA DL+ V SQF R L + ++Q RY S +WR
Sbjct: 663 GRMRFHGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFSRFLRNPRVQGAIRYESPYWR 722
Query: 169 TWAACFIQAAWRRYKRRRLAK 189
T AA IQ AW RY+ RRL +
Sbjct: 723 TIAATRIQVAW-RYRNRRLKR 742
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,394,448
Number of extensions: 325265
Number of successful extensions: 681
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 665
Number of HSP's successfully gapped: 14
Length of query: 245
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 147
Effective length of database: 11,918,829
Effective search space: 1752067863
Effective search space used: 1752067863
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 154 (63.9 bits)