BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0172500 Os05g0172500|AK102960
(382 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0172500 Cyclin-like F-box domain containing protein 736 0.0
Os05g0172100 Galactose oxidase, central domain containing p... 338 3e-93
Os07g0535200 Cyclin-like F-box domain containing protein 283 1e-76
Os07g0535100 Cyclin-like F-box domain containing protein 282 3e-76
Os07g0535300 Cyclin-like F-box domain containing protein 247 1e-65
Os07g0535700 Galactose oxidase, central domain containing p... 228 8e-60
Os05g0139200 Cyclin-like F-box domain containing protein 207 8e-54
Os05g0177400 Cyclin-like F-box domain containing protein 207 8e-54
Os05g0175960 Cyclin-like F-box domain containing protein 204 1e-52
Os05g0177000 Cyclin-like F-box domain containing protein 199 4e-51
Os05g0172400 195 5e-50
Os01g0380800 Cyclin-like F-box domain containing protein 119 3e-27
Os01g0379400 Cyclin-like F-box domain containing protein 100 3e-21
Os05g0139300 Cyclin-like F-box domain containing protein 91 1e-18
Os08g0529400 Cyclin-like F-box domain containing protein 85 1e-16
Os01g0876300 Galactose oxidase, central domain containing p... 84 2e-16
Os05g0177100 Conserved hypothetical protein 71 2e-12
Os08g0529300 Cyclin-like F-box domain containing protein 69 7e-12
>Os05g0172500 Cyclin-like F-box domain containing protein
Length = 382
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/382 (93%), Positives = 359/382 (93%)
Query: 1 MAXXXXXXXXXXATRNPAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKK 60
MA ATRNPAAELTDDLIVEILSRLPAKS LISDPHHRKK
Sbjct: 1 MAKGSKKKKGSSATRNPAAELTDDLIVEILSRLPAKSVRRCRRVCRRWRRLISDPHHRKK 60
Query: 61 LPQTLAGFFHLSVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGL 120
LPQTLAGFFHLSVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGL
Sbjct: 61 LPQTLAGFFHLSVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGL 120
Query: 121 LLCQCFESSDAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVP 180
LLCQCFESSDAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVP
Sbjct: 121 LLCQCFESSDAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVP 180
Query: 181 CDDVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGR 240
CDDVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGR
Sbjct: 181 CDDVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGR 240
Query: 241 TWRTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLK 300
TWRTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLK
Sbjct: 241 TWRTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLK 300
Query: 301 HSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRDYTLMAYDMDHKESRVIQALG 360
HSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRDYTLMAYDMDHKESRVIQALG
Sbjct: 301 HSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRDYTLMAYDMDHKESRVIQALG 360
Query: 361 SDCILECLPYVPLYAETLSNRS 382
SDCILECLPYVPLYAETLSNRS
Sbjct: 361 SDCILECLPYVPLYAETLSNRS 382
>Os05g0172100 Galactose oxidase, central domain containing protein
Length = 389
Score = 338 bits (868), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 243/377 (64%), Gaps = 14/377 (3%)
Query: 14 TRNPAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLSV 73
TRNPAAELTDDLIV+ILSRLPA P + P+ +
Sbjct: 15 TRNPAAELTDDLIVDILSRLPASRSADASAYPGGGAASSPTPTTARSSPKPSPASSTAAR 74
Query: 74 NESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRF--ERISMVDSCGGLLLCQCFESSDA 131
P ARHFVNV+G G P +CP+ SFLPRF E + MVD CGGLLL +CF SSD
Sbjct: 75 TNHAAPKLARHFVNVTGRG--RPLICPTISFLPRFDLEGMRMVDCCGGLLLFRCFMSSDE 132
Query: 132 FRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFV--PCDDVTGVKI 189
F Y+V NP TEEW+ P+SG++P+ + F LGFDP VSS FHVFEFV C V GV+I
Sbjct: 133 FCYLVCNPSTEEWVAFPDSGYNPEWQ-FFTHLGFDPAVSSHFHVFEFVMGDCGFVEGVEI 191
Query: 190 YSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGRTWRTTKVPK 249
YSSET WN+ ESEW +T + D R+ F NGMLHLV +I+SVDVEG W++ P+
Sbjct: 192 YSSETGLWNFMESEWDPETTVYDRTRTFF-NGMLHLVEEGIAILSVDVEGEIWQSIGAPR 250
Query: 250 --MEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHSVTNEL 307
+E VE++ + I QS+GKL YLS Y+TVP +LSIW+LEDYSKDEWTLKH +T E
Sbjct: 251 PELENVEDMFALVSCFIGQSQGKLCYLSAYDTVPWNLSIWVLEDYSKDEWTLKHKLTTEQ 310
Query: 308 LYEKINSKYKS----SEFCYVVIVHLDCNLIYYITRDYTLMAYDMDHKESRVIQALGSDC 363
L EKIN K K+ + + +VV VH +CNLIYYI TLM+YDM HK+S VI+ LG
Sbjct: 311 LSEKINCKCKTDFDKAWYYHVVAVHSECNLIYYIAGGDTLMSYDMGHKQSCVIENLGPGN 370
Query: 364 ILECLPYVPLYAETLSN 380
LPYVPLY+E LS+
Sbjct: 371 NSGYLPYVPLYSEILSH 387
>Os07g0535200 Cyclin-like F-box domain containing protein
Length = 377
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 225/384 (58%), Gaps = 31/384 (8%)
Query: 13 ATRNPAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLS 72
RNPAA LTDDL+VEIL RLP +S LI+D HRKKLPQTL+GFF+ S
Sbjct: 7 GRRNPAASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLPQTLSGFFYKS 66
Query: 73 VNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESS--- 129
++ R P A HF NVSG G +P + PSFSFLP+ + + +D C GLLLC+CF+
Sbjct: 67 ISGERCPCSAHHFTNVSGKG--VPLIYPSFSFLPQCDTVVPLDCCNGLLLCRCFQPGPNN 124
Query: 130 -----DAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPC--D 182
+ F Y V NP T+EW++LP++ + + A L FDP +SS FHV E+V +
Sbjct: 125 SDDEIEPFHYAVCNPATKEWVMLPDADWANGETRI-ACLCFDPAISSHFHVLEYVEAEYE 183
Query: 183 DVTGVKIYSSETREWNYRESEWCTDTGISDIC--RSAFCNGMLHLVSYQRSIVSVDVEGR 240
DVTGV+IYSSET W S W D + RS F NG LH + I VD+EG+
Sbjct: 184 DVTGVEIYSSETGLWTLHVSGWGDDVFLRHWANPRSVFLNGFLHSATCAAEIAVVDMEGK 243
Query: 241 TWRTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVP---ISLSIWLLEDYSKDEW 297
WRT +P+ EG G I Q++G+ L +N P LSIW+LEDY D W
Sbjct: 244 KWRTIAMPEPEGDT-------GIIHQTQGR---LCAFNVDPDDIFKLSIWILEDYDTDNW 293
Query: 298 TLKHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITR-DYTLMAYDMDHKESRVI 356
LKH+V++ L+ KY+ +++VH +CNLI+++ D TLMAY+MD KE RVI
Sbjct: 294 ILKHTVSSLRLFG--GKKYQFGFDYQIIVVHPECNLIFFVYGWDKTLMAYEMDRKEVRVI 351
Query: 357 QALGSDCILECLPYVPLYAETLSN 380
+ LG D LPYVPL+ E+ ++
Sbjct: 352 RNLGHDSSDPYLPYVPLFYESFAD 375
>Os07g0535100 Cyclin-like F-box domain containing protein
Length = 377
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/382 (44%), Positives = 224/382 (58%), Gaps = 31/382 (8%)
Query: 15 RNPAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLSVN 74
RNPAA LTDDL+VEIL RLP +S LI+D HRKKLPQTL+GFF+ S +
Sbjct: 9 RNPAASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLPQTLSGFFYKSSS 68
Query: 75 ESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESS----- 129
R P A HF NVSG G +P + PSFSFLP+ + + +D C GLLLC+CF+
Sbjct: 69 GERCPCSAHHFTNVSGKG--VPLIYPSFSFLPQCDTVVPLDCCNGLLLCRCFQPGPNNSD 126
Query: 130 ---DAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPC--DDV 184
+ F Y V NP T+EW++LP++ + + A L FDP +SS FHV E+V +DV
Sbjct: 127 DEIEPFHYAVCNPATKEWVMLPDADWANGETRI-ACLCFDPAISSHFHVLEYVEAEYEDV 185
Query: 185 TGVKIYSSETREWNYRESEWCTDTGISDIC--RSAFCNGMLHLVSYQRSIVSVDVEGRTW 242
TGV+IYSSET W S W D + RS F NG LH + I VD+EG+ W
Sbjct: 186 TGVEIYSSETGLWTLHVSGWGDDVFLRHWANPRSVFLNGFLHSATCAAEIAVVDMEGKKW 245
Query: 243 RTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVP---ISLSIWLLEDYSKDEWTL 299
RT +P+ EG G I Q++G+ L +N P LSIW+LEDY D W L
Sbjct: 246 RTIAMPEPEGDT-------GIIHQTQGR---LCAFNVDPDDIFKLSIWILEDYDTDNWIL 295
Query: 300 KHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITR-DYTLMAYDMDHKESRVIQA 358
KH+V++ L+ + KY+ ++ VH +CNLI+++ D TLMAY+MD KE R I+
Sbjct: 296 KHTVSSLRLFGGM--KYRFGFDYQIIAVHPECNLIFFVYGWDKTLMAYEMDRKEVRAIRN 353
Query: 359 LGSDCILECLPYVPLYAETLSN 380
LG D LPYVPL+ E+L++
Sbjct: 354 LGHDSFEPYLPYVPLFNESLAD 375
>Os07g0535300 Cyclin-like F-box domain containing protein
Length = 437
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 211/362 (58%), Gaps = 25/362 (6%)
Query: 19 AELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLSVNESRF 78
A T DL+V+IL RLP +S LI+D HRKKLPQTL+GFF+ S +E R
Sbjct: 80 ASPTIDLVVDILRRLPVRSVCRSKGVCPYWRDLIADHDHRKKLPQTLSGFFYTSFSEERS 139
Query: 79 PVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQC--FESSDAFRYVV 136
E HF NV+GIG +P + P+F+FLP+ + + +DSC GLLLC+C F+ F Y V
Sbjct: 140 AAE-HHFTNVTGIG--MPLISPTFAFLPQCKEVIPLDSCNGLLLCRCLQFDGVSKFHYAV 196
Query: 137 FNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFV--PCDDVTGVKIYSSET 194
NP TEEW++LP++ + + A L FDP +SS FHV E+V + VTGV+I SS+T
Sbjct: 197 CNPATEEWVMLPDANWADGENRI-ACLCFDPAISSHFHVVEYVEDEAECVTGVEINSSKT 255
Query: 195 REWNYRESEW--CTDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGRTWRTTKVPKMEG 252
W+ + W +S RS F NG LH V+ IV+VD+EG+ WR VP
Sbjct: 256 GLWSVHVNGWNGVVLVSLSVNRRSVFLNGFLHSVTPADEIVAVDMEGKKWRKIPVPD--- 312
Query: 253 VEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHSVTNELLYEKI 312
RD G I Q++G L + LSIW LEDY + W LKH+V++ L+E
Sbjct: 313 ----RDNDIGIIHQTQGCLSAFNVDLLDIFKLSIWFLEDYDTNNWILKHTVSSLDLFEGK 368
Query: 313 NSKYKSSEFCYVVI-VHLDCNLIYYI-TRDYTLMAYDMDHKESRVIQALGSDCILECLPY 370
N + +F Y VI VH DCNLI+++ D TLMAY+MD KE RVI+ LG D C PY
Sbjct: 369 NYRL---DFEYQVIAVHPDCNLIFFVYGLDNTLMAYEMDRKEVRVIRNLGHD---YCWPY 422
Query: 371 VP 372
+P
Sbjct: 423 LP 424
>Os07g0535700 Galactose oxidase, central domain containing protein
Length = 335
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 206/346 (59%), Gaps = 31/346 (8%)
Query: 52 ISDPHHRKKLPQTLAGFFHLSVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERI 111
I+D HRKKLPQTL+GFF+ S++ R P ARHF N +G G +P VCP+FSFLP+ +
Sbjct: 1 IADHEHRKKLPQTLSGFFYKSIDYERCPHMARHFTNATGRG--MPLVCPTFSFLPQCHHV 58
Query: 112 SMVDSCGGLLLCQCFESSDA--FRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDV 169
++DSC GLLLC+C S + F+Y V NP T E ++LP++ + D A L FDP +
Sbjct: 59 VILDSCNGLLLCRCHVSRETLQFQYAVCNPATGECVMLPDANW-AIDENRTACLCFDPAI 117
Query: 170 SSQFHVFEFVPCDD-----------VTGVKIYSSETREWNYRESEWCTDTGIS---DICR 215
SS FHV E+V ++ VTGV IYSS+T W+ + W + +S D R
Sbjct: 118 SSHFHVLEYVEDEEYVEDEDEYDALVTGVVIYSSKTGLWSLHVNGWDDEVMVSLPVDRTR 177
Query: 216 SAFCNGMLHLVSYQRSIVSVDVEGRTWRTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLS 275
F NG LH V+ IV+VD+EG+ WR +P +G G I Q++G+L +
Sbjct: 178 -VFLNGFLHSVT-TCDIVAVDMEGKKWRKIPMPDPDGDI-------GIIHQTQGRLCAFN 228
Query: 276 QYNTVPISLSIWLLEDYSKDEWTLKHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIY 335
+ LSIW LEDY D W LKH+V++ L+ + KY+ V+ VH +CNLI+
Sbjct: 229 VDPNDILELSIWFLEDYDTDNWILKHTVSSINLFGR--KKYQLDFDYQVIAVHPECNLIF 286
Query: 336 YITRDY-TLMAYDMDHKESRVIQALGSDCILECLPYVPLYAETLSN 380
++ + TLMAY+MD KE RVI+ LG + L LPYVP+++E+L +
Sbjct: 287 FVYGWHNTLMAYEMDRKEVRVIRKLGHESCLPYLPYVPMFSESLPD 332
>Os05g0139200 Cyclin-like F-box domain containing protein
Length = 399
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 213/386 (55%), Gaps = 25/386 (6%)
Query: 16 NPAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFF-HLSVN 74
NPAA+LTDDLIVEILSRLPAKS LIS HRKKLP TLAGF H SV
Sbjct: 20 NPAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVP 79
Query: 75 ESRFPVEARHFVNVSGIGGR------LPHVCPSFSFLPRFERISMVDSCGGLLLCQCFES 128
V HF ++ G +P PS SFLP + I D C GLLLC C ++
Sbjct: 80 LHDGIVLIPHFDSIDGGEEDEEEHRLVPD--PSLSFLPGYRTIFPKDCCNGLLLCLCCKN 137
Query: 129 S--DAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPCDD--V 184
S D YVV NP T+ WI+LPE D RLGFDP +S FHVF + D V
Sbjct: 138 SPRDESDYVVCNPATQRWIILPE--IDRADPVSTVRLGFDPALSPYFHVFAILEHVDGCV 195
Query: 185 TGVKIYSSETREWNYRESEWCT--DTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGRTW 242
+GV+I+S ET W++RE+ W D + +SAF +GM++ +SY +I++VD EG+ W
Sbjct: 196 SGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAIIAVDTEGKKW 255
Query: 243 RTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHS 302
+T + E + + + I QS+G LYY++ + LS+W L+DY W+ K++
Sbjct: 256 KTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDYCSCGWSFKYN 315
Query: 303 VTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRD---YTLMAYDMDHKESRVIQAL 359
++ L+ N K + E+ + I H +CN+I+Y+ RD TL++YDMD + I +
Sbjct: 316 ISTSQLFGWTNMKLE-REYSLIAI-HPECNMIFYVFRDEGQNTLLSYDMDRGKVNSICNM 373
Query: 360 GS---DCILECLPYVPLYAETLSNRS 382
CLPYVP++ E+L + +
Sbjct: 374 RDPFWKTWDPCLPYVPVFMESLPDHA 399
>Os05g0177400 Cyclin-like F-box domain containing protein
Length = 351
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 184/322 (57%), Gaps = 50/322 (15%)
Query: 17 PAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQ-----TLAGFFHL 71
PA +LTDDL+VEILSR+P KS +IS P HR LP+ + GFF+
Sbjct: 17 PAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFY- 75
Query: 72 SVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESSDA 131
+ F NV+G G P V PS FLP+ E ++++DSC GLLLC+C+ +D
Sbjct: 76 ----------SDTFTNVTGEG--RPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADP 123
Query: 132 --FRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSS-QFHVFEFVP-------- 180
F Y+V NP TE+W++LP+SG+ D+ ARLGFDP VSS FHVFEFV
Sbjct: 124 RRFDYLVVNPATEQWVILPDSGW--SDKVQTARLGFDPVVSSSHFHVFEFVEDGAGDADG 181
Query: 181 --------CDDVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSI 232
V GV+IYSS T EW+++++ W + I D S F +G+LHL++ + +
Sbjct: 182 NVDDDDDFDGHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYVV 241
Query: 233 VSVDVEGRTWRTTKVPK-----MEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIW 287
+VDVEG WRT +P+ +G+ E G I S+G LY+++ + P +S+W
Sbjct: 242 AAVDVEGNAWRTIPMPQSLVEPFDGIGE------GFIGLSQGSLYFVNTDHDEPYKVSVW 295
Query: 288 LLEDYSKDEWTLKHSVTNELLY 309
+LEDYS ++W KH+V++ L+
Sbjct: 296 VLEDYSSEQWIWKHTVSHLHLF 317
>Os05g0175960 Cyclin-like F-box domain containing protein
Length = 381
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 212/391 (54%), Gaps = 51/391 (13%)
Query: 17 PAAE-LTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQ-----TLAGFFH 70
PAAE LTDDL+VE+LSR+P KS +ISDP HR+ LP+ + GFF
Sbjct: 13 PAAEKLTDDLLVEVLSRVPYKSLCRSKRVCRRWRRVISDPDHRRLLPRYHLHDAVVGFF- 71
Query: 71 LSVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESSD 130
+ R F++ SG G V PS FLP + ++D C GLLLC+ SD
Sbjct: 72 ----------DHRSFISFSGRG---RFVGPSLPFLPDCGDLRLLDICNGLLLCRRRRLSD 118
Query: 131 A--FRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSS-QFHVFEFVPCD----- 182
F Y+V NP TE+WIVLPESG+ K++ ARLGFDP VSS FHVFEF +
Sbjct: 119 PRRFDYLVANPATEQWIVLPESGWTHKEQ--IARLGFDPAVSSSHFHVFEFELVEHSAMG 176
Query: 183 -------DVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSIVSV 235
+V V+IYSSET W +R + W DI RS F GMLHL++ + V
Sbjct: 177 MSGDHDGNVVAVEIYSSETGVWIHRNNGWGCIIRTLDIWRSVFFKGMLHLITMDDVVAVV 236
Query: 236 DVEGRTWRTTKVPKM-----EGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLE 290
DVEG +WRT +P+ GV++ G I S+ L +++ LS+W+LE
Sbjct: 237 DVEGNSWRTIPMPETFVDPYYGVDD------GFIDVSQDCLCFVNTDRDDLYKLSVWVLE 290
Query: 291 DYSKDEWTLKHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYIT-RDYTLMAYDMD 349
DYS D+WTLKH+V++ L+ + + VV +H N+I+ ++ D ++Y+MD
Sbjct: 291 DYSSDQWTLKHTVSHLHLFGTDKQHFGYDD--KVVSIHPKRNIIFLVSLNDGIFISYEMD 348
Query: 350 HKESRVIQALGSDCILECLPYVPLYAETLSN 380
+E I LG LPYVPLY+E+L+N
Sbjct: 349 SREVHYICELGDILTRHYLPYVPLYSESLAN 379
>Os05g0177000 Cyclin-like F-box domain containing protein
Length = 424
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 208/400 (52%), Gaps = 49/400 (12%)
Query: 18 AAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLP----QTLAGFFHLSV 73
A ELTDDL+VEILSR+P KS +IS P HR++LP Q LAGF +
Sbjct: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLY--- 91
Query: 74 NESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESSD--- 130
+ + V R F V + P + PSFSFLP+ + + +VDSC GLLLC+C+ +
Sbjct: 92 --ADYRVLNR-FQIVPALDPP-PLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHR 147
Query: 131 AFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVP---------- 180
F YVV +P ++++V P+S K R F LGFDP VSS FHVFE V
Sbjct: 148 TFNYVVCSPTAKKFVVFPDSTCSKKVRPF---LGFDPAVSSHFHVFEVVEDWDYYDCDDD 204
Query: 181 ------CDDVTGVKIYSSETREWNYR-ESEWCTDTGI----SDICRSAFCNGMLHLVSYQ 229
+DV G++IYSSET W+ ++ W I +S F NGMLHLV+ Q
Sbjct: 205 DLECDGVEDVVGLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLVAIQ 264
Query: 230 RSIVSVDVEGRTWRTTKVPKMEGVEEVRDWLP------GSICQSEGKLYYLSQYNTVPIS 283
+ VDVEG+ WRT + +G P G I S L++ S +
Sbjct: 265 PVVAVVDVEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWE 324
Query: 284 LSIWLLEDYSKDEWTLKHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRDYT- 342
+S+W+L+DY +WTL+H+V+ +E+ + + + C +V ++ ++++ DY
Sbjct: 325 ISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDC--TLVWIEGRKMFFMFYDYVH 382
Query: 343 --LMAYDMDHKESRVIQALGSDCILECLPYVPLYAETLSN 380
L +Y+MD E R + S C LPY+PL+ E+L++
Sbjct: 383 CILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLAD 422
>Os05g0172400
Length = 282
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 107/132 (81%), Gaps = 5/132 (3%)
Query: 51 LISDPHHRKKLPQTLAGFFHLSVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFER 110
LISDP HRKKLPQTLAGFF+ S NESRFP+EARHFVNVSG G P V PSFSFLPRFE
Sbjct: 39 LISDPDHRKKLPQTLAGFFYHSENESRFPMEARHFVNVSGRG--RPLVYPSFSFLPRFES 96
Query: 111 ISMVDSCGGLLLCQCFESSDAFRYVVFNPCTEEWIVLPESGFHPKDRG---FCARLGFDP 167
I MVDSCGGLLLC+CFESSDA RYVV NP TEE + LPES + + G CARLGFDP
Sbjct: 97 IRMVDSCGGLLLCRCFESSDASRYVVCNPATEELVALPESSYDAEGGGEEEMCARLGFDP 156
Query: 168 DVSSQFHVFEFV 179
DVSSQFHVF+FV
Sbjct: 157 DVSSQFHVFQFV 168
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
Query: 285 SIWLLEDYSKDEWTLKHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRDYTLM 344
I +LEDYSKDEWTLKH VT ELL KI+ KY++ F V VHLDCNL+YYI DY LM
Sbjct: 187 GITVLEDYSKDEWTLKHKVTIELLSGKISCKYQTM-FYRGVAVHLDCNLVYYIA-DYILM 244
Query: 345 AYDMDHKESRVIQALGSDCILECLPYVPLYAETLSN 380
+YDMD KE RVIQ LGSDC++E LPYVPLYA+TLS+
Sbjct: 245 SYDMDRKEPRVIQDLGSDCMMEYLPYVPLYAKTLSS 280
>Os01g0380800 Cyclin-like F-box domain containing protein
Length = 391
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 141/307 (45%), Gaps = 39/307 (12%)
Query: 20 ELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLSVNESRFP 79
+L DDL +++LSRLP KS S+PH+ KLP+ L GF + + S
Sbjct: 13 KLPDDLTLDVLSRLPYKSFCRAKCTCTGWLSFSSNPHYCDKLPKPLTGFLYQKSDSSAIE 72
Query: 80 VEARHFVNVSGIGGRLPHVCP-------SFSFLPRFERISMVDSCGGLLLCQCFESSDA- 131
V + +CP S SFLPR+E + + DSC GL+LC+ ++ +
Sbjct: 73 VAS---------------LCPDDRSFDTSLSFLPRYEWLELTDSCNGLVLCKYGRNTSSP 117
Query: 132 --FRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPCDD------ 183
+VV NP T +W+ LPE+ P+ + +L FDP S F+VF F +
Sbjct: 118 SVANFVVCNPATRQWMELPETLLEPEGHSYATKLAFDPSWSPYFYVFNFEEKRNPVERWA 177
Query: 184 -VTGVKIYSSETREWNYRESEWCTDTGISDICRS-AFCNGMLHLVSYQRSIVSVDVEGRT 241
++ V I+SS W + + +W IS C+ G L L + ++ +D T
Sbjct: 178 CISKVAIFSSRNSTW-FMDDKWEPSNQISVDCQPHVLLGGKLFLQTSSCRVLVIDAFHNT 236
Query: 242 WRTT----KVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEW 297
+ + +P + + D L G + G L+Y+ Q +T +L +W + Y +W
Sbjct: 237 EQPSHWIFDLPGYKPTSPMVDCLTGYLGHKSGVLHYV-QPDTGGRTLLVWARDGYPHGDW 295
Query: 298 TLKHSVT 304
LKH ++
Sbjct: 296 NLKHRLS 302
>Os01g0379400 Cyclin-like F-box domain containing protein
Length = 433
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 27/298 (9%)
Query: 21 LTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLSVNESRFPV 80
LTDDL+V+ILSRLP KS L SD + KLP+ AG + N S
Sbjct: 63 LTDDLVVDILSRLPLKSVCCFKCVCKSWASLFSDQYFCTKLPRRPAGLLYQDSNNSS--- 119
Query: 81 EARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLL---CQCFESSDAFRYVVF 137
+ ++ + + S SF+P E + +VD GL+L +S D+ ++V
Sbjct: 120 -----IQIAKLPSGNSEIGTSLSFMPHHENLKLVDCSNGLILFTHGSKSDSPDSSHFIVC 174
Query: 138 NPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEF----VPCDDV---TGVKIY 190
NP T+EWI LP++ + A L F+P S F VF F P V T V+I+
Sbjct: 175 NPATQEWIALPDTCPRVNGSDYIAMLAFNPSSSCHFFVFNFQKRRSPHSGVFVITEVEIF 234
Query: 191 SSETREWNYRESEWCTDTGISDICR-SAFCNGMLHLVSYQRSIVSVDVEG--RTWRTTKV 247
SSE W ++ +T I I +G+L+L + + S+ +++ + W
Sbjct: 235 SSEDFTWIADDA---FETEIMMISMPHVLLHGVLYLRTVEHSVFAIETPHMYKPWIHRWT 291
Query: 248 PKMEGVE-EVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHSVT 304
++ G + +++ G + +S G L+Y+ Q N L++W LE + +W++ HS++
Sbjct: 292 FELPGDSCPMNNYIWGCLGESSGILHYM-QPNYDGCWLNVWRLESRHQ-QWSMTHSLS 347
>Os05g0139300 Cyclin-like F-box domain containing protein
Length = 309
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 104/193 (53%), Gaps = 18/193 (9%)
Query: 15 RNPAAELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGF---FHL 71
R +L DDLIV+ILSRLPAKS LIS HRKKLP TL+GF ++
Sbjct: 13 RGGIDDLPDDLIVDILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLSGFISRYYG 72
Query: 72 SVNESRFPVEARHFVNVSGIGGR------LPHVCPSFSFLPRFERISMVDSCGGLLLCQC 125
+N+ V HF ++ G +P PS SFL + IS D C GLLLC C
Sbjct: 73 PLNDDEL-VSIPHFDSIDGGEEDEEEHRLVPD--PSLSFLLGYMSISPKDCCNGLLLCLC 129
Query: 126 FESS--DAFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPCDD 183
++S D YVV NP T+ WI+LPE D+ RL FDP +S FHVF + D
Sbjct: 130 CKNSPRDESDYVVCNPATQRWIILPE--IDDYDQLASIRLCFDPALSPYFHVFAILEDAD 187
Query: 184 --VTGVKIYSSET 194
+TGV+I+SSET
Sbjct: 188 GCITGVEIFSSET 200
>Os08g0529400 Cyclin-like F-box domain containing protein
Length = 369
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 151/357 (42%), Gaps = 34/357 (9%)
Query: 20 ELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHLSVNESRFP 79
E DDL+VEILSRLP KS LIS R++LP AG F
Sbjct: 2 EFCDDLLVEILSRLPFKSLARFKCVSRSWRALISGGDLRRRLPLLAAGLFVGDGGGG--- 58
Query: 80 VEARHFVNVSGIGGRLPHVCPSFSFLPRFERIS-MVDSCGGLLLCQCFESSDAFRYVVFN 138
E R+ SG G C SF P E + +VD+C GLLL + ++ A V
Sbjct: 59 -EPRYATACSGDG---VEFC-DMSFFPLAETAARVVDACEGLLLYRSLAAASAM--YVAC 111
Query: 139 PCTEEWIVLPESGFHPKDRGFCARLGFDP----DVSSQFHVFEFVPCDDVTG-VKIYSSE 193
P T W LP P+ L FDP S ++HV FV + V ++SSE
Sbjct: 112 PATRRWAALPV----PRREAQLPLLAFDPADGGGGSPRYHVVCFVAWQERGATVDVFSSE 167
Query: 194 TREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSIVSVDVEGRTWRTTKVPKMEGV 253
T W R++ + S + + G+LH+++Y +V +D+ T TT V
Sbjct: 168 TGAWAERDAAFGGVEASSLSPTTHYRGGVLHVLAYPDRVVLMDLAATTTTTTSVAPGRLA 227
Query: 254 EEVRDWLPGS--ICQSEGKLYYLSQYNTVPISLSIWLLEDYSKD----EWTLKHSV-TNE 306
+ D + + S G+L+Y L +W L+ + +W L ++V NE
Sbjct: 228 PRLPDDVDAGARLGHSRGRLHYAKCDGE---RLRVWALDVDAASPGSCQWILTNTVCVNE 284
Query: 307 LLYEKINSKYKSSEFCYVVIVHLD-CNLIYYITRDYTLMAYDMDHKESRVIQALGSD 362
+ IN ++ + H D +++Y + + + + DM KE LG++
Sbjct: 285 M---TINGGLWAASEVKFLAFHPDMADVVYLSSPEGKVASCDMRRKEMVSSWKLGAE 338
>Os01g0876300 Galactose oxidase, central domain containing protein
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 21/252 (8%)
Query: 102 FSFLPRFERISMVDSCGGLLLCQCFESSDAFRYVVFNPCTEEWIVLPESGFHPKDRGFCA 161
F P E +++D C G+LL + + AF V NP T W LP P+ + +
Sbjct: 1 MGFFPGHETSTIIDGCNGMLLYYASQPAAAFH--VVNPTTRRWARLPP----PRGKTLLS 54
Query: 162 RLGFDPDVSSQFHVFEFVP-CDDVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCN 220
L FDP S + V F V+++ SE W E ++ DT F +
Sbjct: 55 VLAFDPSASPHYRVVCFTGWLPRGASVEVFDSEGGAWRDHELDFGLDTDAMSATMHYF-D 113
Query: 221 GMLHLVSYQRSIVSVDVEGRTWRTTKVPKMEGVEEVRDWLPGSICQSEGKLYYLSQYNTV 280
G +H+++Y +V +D+ T +P G+L Y S T
Sbjct: 114 GAIHVLAYSGHVVRIDLGTMACAVTALPAPVSCR-------ARAGHCRGRLRYASSDGT- 165
Query: 281 PISLSIWLLEDYSKDEWTLKHSV-TNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITR 339
L W L++ + EW LKH + N+L+ + + ++ F ++ H D ++Y T
Sbjct: 166 --RLKFWELKNAATSEWALKHELGVNDLVAGEASGACQAVTFLFMAF-HPDREMVYLWT- 221
Query: 340 DYTLMAYDMDHK 351
+ L+A+DM+ +
Sbjct: 222 PWKLVAFDMEKR 233
>Os05g0177100 Conserved hypothetical protein
Length = 135
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 262 GSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHSVTNELLYEK----INSKYK 317
G I S+G LY+++ + P +S+W+LEDYS ++W KH+V++ L++ YK
Sbjct: 15 GFIVLSQGSLYFVNSDHDKPYKVSVWVLEDYSSEQWIWKHTVSHLHLFQTKRLLFGHDYK 74
Query: 318 SSEFCYVVIVHLDCNLIYYI-TRDYTLMAYDMDHKESRVIQALGS-DCILECLPYVPLYA 375
VV +H + N I+ + LM+Y++D +E I +G + ++ LPYVPLY
Sbjct: 75 ------VVSIHPERNNIFLVWPHSKMLMSYELDSREVHFICGIGGCEWVMYYLPYVPLYL 128
Query: 376 ETLSN 380
E+L++
Sbjct: 129 ESLAD 133
>Os08g0529300 Cyclin-like F-box domain containing protein
Length = 371
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 24/297 (8%)
Query: 19 AELTDDLIVEILSRLPAKSXXXXXXXXXXXXXLISDPHHRKKLPQTLAGFFHL---SVNE 75
A + DDL+ EI+ RLP KS +SD + R++LP + + +V
Sbjct: 14 ALIGDDLLSEIIVRLPFKSVARSACVSKDWRAAVSDDYLRRRLPLLMTTVYFPDDDAVAA 73
Query: 76 SRFPVEARHFVNVSGIG--GRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESSDAFR 133
F + G G C FLP + + D C GLLLC+ S
Sbjct: 74 GGGGGGGPRFACAASDGNDGHRLEDC-HLGFLPERGGVVVCDGCNGLLLCR---SPGTPE 129
Query: 134 YVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVFEFVPC-DDVTGVKIYSS 192
+ V +P T W LP + L FDP S + V F D V+++SS
Sbjct: 130 FFVVDPVTRRWAALPAPAKAAT----LSVLAFDPSTSPDYRVVNFTGWRDRGAAVEVFSS 185
Query: 193 ETREWNYRESEWCTDTGISDICRSAFCNGMLH-LVSYQRSIVSVDVEGRTWRTTKVPKME 251
T W R++E+ S + +G+L+ L S +VS+++ + + E
Sbjct: 186 ATWAWTARDTEFGGVPASSLSGSMHYHDGILYILASEPDCLVSLNLADFSSTAAVIDLPE 245
Query: 252 GVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIWLLEDYSKDEWTLKHSVTNELL 308
V D + S G+L+Y+ + + L +W L+D D+W KH+V E L
Sbjct: 246 PV----DGGDAHVAHSGGRLHYIFRDGEL---LKVWELDD--DDQWRPKHAVKVEHL 293
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,488,800
Number of extensions: 518758
Number of successful extensions: 1658
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 1582
Number of HSP's successfully gapped: 19
Length of query: 382
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 279
Effective length of database: 11,657,759
Effective search space: 3252514761
Effective search space used: 3252514761
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)