BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0643600 Os04g0643600|AK105170
(252 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0643600 Similar to Cyclic nucleotide-gated channel C (... 523 e-149
Os03g0646300 Similar to Cyclic nucleotide-gated channel A (... 345 2e-95
Os02g0255000 Similar to Cyclic nucleotide-gated ion channel... 309 1e-84
Os06g0527100 Similar to Cyclic nucleotide-gated channel A (... 309 1e-84
Os06g0188000 Similar to Cyclic nucleotide-gated channel C (... 292 2e-79
Os09g0558300 Similar to Cyclic nucleotide-gated channel A (... 285 2e-77
Os12g0163000 Similar to Cyclic nucleotide-gated channel A (... 281 3e-76
Os02g0627700 Similar to Cyclic nucleotide-gated channel A (... 276 1e-74
Os02g0789100 Cyclic nucleotide-binding domain containing pr... 253 6e-68
Os08g0254600 Cyclic nucleotide-binding domain containing pr... 208 3e-54
Os03g0758300 Similar to Cyclic nucleotide-gated ion channel... 170 1e-42
Os01g0782700 Similar to Cyclic nucleotide-gated ion channel... 158 3e-39
Os05g0502000 Similar to Cyclic nucleotide-gated ion channel... 156 1e-38
Os02g0773400 Ion transport domain containing protein 139 2e-33
>Os04g0643600 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 252
Score = 523 bits (1347), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG
Sbjct: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR
Sbjct: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY
Sbjct: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
Query: 181 KRKMAEQHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPK 240
KRKMAEQHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPK
Sbjct: 181 KRKMAEQHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPK 240
Query: 241 PPEPDFAVDEAD 252
PPEPDFAVDEAD
Sbjct: 241 PPEPDFAVDEAD 252
>Os03g0646300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 696
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/251 (67%), Positives = 196/251 (78%), Gaps = 18/251 (7%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E LV LPKDLRRDIKRHLCLGLV+RVPLF NMDERLLDAICERLRP LYTE +I+REG
Sbjct: 461 EVLVANLPKDLRRDIKRHLCLGLVRRVPLFANMDERLLDAICERLRPALYTERTFIIREG 520
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPVD+M FI+ GCLES TTDGGRSGFFN+ L+E FCG+ELLTWALDPK+ + P+STR
Sbjct: 521 DPVDQMLFIIRGCLESITTDGGRSGFFNRSLLEESDFCGEELLTWALDPKAGLSLPSSTR 580
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TV+AL+EVEAFAL ++ELKFVA QFRR+HS+QVQHTFRFYSQ WRTWAA +IQAAWRR+
Sbjct: 581 TVRALSEVEAFALHSDELKFVAGQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWRRHL 640
Query: 181 KRKMAEQHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVR--L 238
KR+ A R S+ L T+ SRFAANA+RGVHR RSR + ++ +
Sbjct: 641 KRR-----------AIRSST-----GLKTTMLVSRFAANAMRGVHRQRSRRADEVLMMPM 684
Query: 239 PKPPEPDFAVD 249
PKP EPDF D
Sbjct: 685 PKPSEPDFGAD 695
>Os02g0255000 Similar to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic
nucleotide-and calmodulin-regulated ion channel 1)
Length = 299
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/258 (60%), Positives = 195/258 (75%), Gaps = 9/258 (3%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E L+ LPK+LRR+IKRHLCL L+ RVP+FENMDE+LLDA+C+RL+P LYTE I+REG
Sbjct: 42 EGLLSNLPKNLRREIKRHLCLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREG 101
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPV+EM FI+ G LES TT+GG++GFFN +K G FCG+ELLTWALDP SA+N P+STR
Sbjct: 102 DPVNEMLFIMRGNLESMTTNGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTR 161
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TVK L+EVEAFAL A++LKFVA+QFRRLHS+Q+QHTFRFYSQ WRTWAACFIQAAW RY
Sbjct: 162 TVKTLSEVEAFALRADDLKFVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYC 221
Query: 181 KRKMAE---QHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVR 237
++K+ + + K +AA SS AA +YASRFA N +R + R +R + R
Sbjct: 222 RKKLEDTLFEKEKRLQAAIVSDGSSSLSLGAA-LYASRFAGNMMRILRRNATRKARLQER 280
Query: 238 LP-----KPPEPDFAVDE 250
+P KP EP+F ++
Sbjct: 281 VPARLLQKPAEPNFFAED 298
>Os06g0527100 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 694
Score = 309 bits (791), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/257 (58%), Positives = 193/257 (75%), Gaps = 7/257 (2%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E L+ LPKDLRR IKRHLCL L+ RVP+FENMD++LL+A+C+RL+P LYTE I+RE
Sbjct: 437 ELLLMNLPKDLRRAIKRHLCLSLLMRVPMFENMDDQLLNALCDRLKPVLYTEGSCIIREE 496
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPV+EM FI+ G L S TT+GGR+GFFN LK G FCG+ELLTWALDP S ++ P+STR
Sbjct: 497 DPVNEMLFIMRGNLMSMTTNGGRTGFFNSDVLKGGDFCGEELLTWALDPTSVSSLPSSTR 556
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TVK ++EVEAFAL AE+LKFVA+QFRRLHS+Q+QHTF+FYSQHWRTWAACFIQAAW RY
Sbjct: 557 TVKTMSEVEAFALRAEDLKFVATQFRRLHSKQLQHTFKFYSQHWRTWAACFIQAAWHRYC 616
Query: 181 KRKMAEQHRKEEEAANRQSSSSHHPSLA--ATIYASRFAANALRGVHRLRSRASPTIVRL 238
++K+ + R++E+ + +L+ A IYASRFA N +R + R +R + +
Sbjct: 617 RKKIEDSLREKEKRLQFAIVNDGATTLSFRAAIYASRFAGNMMRILRRNATRKARLKESV 676
Query: 239 P-----KPPEPDFAVDE 250
P KP EP+FA +E
Sbjct: 677 PARLLQKPAEPNFAAEE 693
>Os06g0188000 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 245
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/253 (57%), Positives = 178/253 (70%), Gaps = 12/253 (4%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E++++ LP DLRRDIKRHLCL LV RVP F MD +LLDAICERL +L T YI+REG
Sbjct: 4 ESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIVREG 63
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPV EM FI+ G LES TTDGGR+GFFN + LK G FCG+ELL WAL PK N P+STR
Sbjct: 64 DPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPSSTR 123
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TVK + EVEAFAL AE+LKFVASQFRRLHSR++QHTFR+YS HWRTWAACFIQAAWRRY
Sbjct: 124 TVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWRRYK 183
Query: 181 KRKMAEQHRKEEEAANRQS-SSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLP 239
+R++A+ E +R+S P + + A R A+ ++ + + R
Sbjct: 184 RRRLAKDLSIRESFFSRRSFEDDGSPEHSLVLNAVRKGAHIIKELPKFR----------- 232
Query: 240 KPPEPDFAVDEAD 252
KP EPDF+ + D
Sbjct: 233 KPSEPDFSAEHDD 245
>Os09g0558300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 713
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/261 (55%), Positives = 187/261 (71%), Gaps = 9/261 (3%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E+++Q LP D+RRD++RHLCL LV+RVP F MD +LLDAICERL L E YI REG
Sbjct: 453 ESILQALPADIRRDVQRHLCLDLVRRVPFFSEMDYQLLDAICERLVSFLCPERTYISREG 512
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPV+EM F++ G LES TT+GGRS FFN + L+ G F G+ELLTWAL PK+ +FP STR
Sbjct: 513 DPVNEMLFVIRGKLESSTTNGGRSNFFNSIILRPGDFAGEELLTWALLPKTNVHFPLSTR 572
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TV++LTEVEAFAL AE+LKFVA+QFRRLHS+++QHTFRFYS HWRTWAACFIQAAWR++
Sbjct: 573 TVQSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRQHQ 632
Query: 181 KRKMAEQHRKEEEAA--NRQSSSSHHPSLAATIYASR-FAANALRGVHRL-----RSRAS 232
+RK+AE + E + + + P T +++ A +A+ +H+ R RA
Sbjct: 633 RRKLAESLSRWESYSWWPEEHPPADKPKQEGTSSSTKTIAESAIAQMHKFASASRRFRAD 692
Query: 233 PTIV-RLPKPPEPDFAVDEAD 252
T + RL KP EPDF+ D D
Sbjct: 693 DTAIRRLQKPDEPDFSADHFD 713
>Os12g0163000 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 648
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/289 (49%), Positives = 190/289 (65%), Gaps = 37/289 (12%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E+++Q+LP DLRR+I+RHLCL LV+RVP F MDE+LLDAICERL +L T++ YI+REG
Sbjct: 358 ESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSLSTKDAYIVREG 417
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPV EM F++ G LES TTDGGR+ FF+ + L+ G FCG+ELLTWAL P + NFP STR
Sbjct: 418 DPVSEMLFVIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWALMPNPSLNFPQSTR 477
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TV+++TEVEAFAL AE+LK+VA+QF+RLHS+++QH FR+YS WR+W ACF+Q AWRRY
Sbjct: 478 TVRSVTEVEAFALRAEDLKYVANQFKRLHSKRLQHAFRYYSHQWRSWGACFVQGAWRRYK 537
Query: 181 KRKMAEQHRKEEE-------------------------------AANRQSSSSHHPSLAA 209
KRK+A + K+EE +R +++ L A
Sbjct: 538 KRKLARELSKQEELYYMQGQGGDDGDGHDDSDSAPLLGAGVGAGGDHRDGAAAGAAHLGA 597
Query: 210 TIYASRFAAN------ALRGVHRLRSRASPTIVRLPKPPEPDFAVDEAD 252
T AS+FA N A G R+ +S +L KP EPDF++ D
Sbjct: 598 TFLASKFAKNTKKSAAAHHGKARMEDVSSIKFPKLAKPDEPDFSLSSDD 646
>Os02g0627700 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 686
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 170/252 (67%), Gaps = 23/252 (9%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E L++ LP D+RRDIKRHLCL LV+RVPLF+ MDER+L+AICERLRP LYT ++RE
Sbjct: 458 EALLEDLPMDIRRDIKRHLCLDLVRRVPLFDEMDERMLEAICERLRPALYTRGTRLVREL 517
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
DPVD M FI+ G L+S TT GGRSGFFN ++ G FCG+ELL WALDP+ AA+ P STR
Sbjct: 518 DPVDSMLFIIRGYLDSYTTQGGRSGFFNSCRIGAGEFCGEELLPWALDPRPAASLPLSTR 577
Query: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
TV+A++EVEAFAL A++L+FVASQFRRLHS +++H FRFYS WRTWAACFIQAAWRR
Sbjct: 578 TVRAVSEVEAFALVADDLRFVASQFRRLHSARIRHRFRFYSHQWRTWAACFIQAAWRRNK 637
Query: 181 KRKMAEQHRKEEEAANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPK 240
+R+ + + R E R S R R + + K
Sbjct: 638 RRRASMELRMREGGEARPGGSV-----------------------RCRRHSCDGKALIKK 674
Query: 241 PPEPDFAVDEAD 252
P EPDF V+E D
Sbjct: 675 PMEPDFTVEEED 686
>Os02g0789100 Cyclic nucleotide-binding domain containing protein
Length = 480
Score = 253 bits (647), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 158/233 (67%), Gaps = 7/233 (3%)
Query: 19 LCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDPVDEMHFILHGCLESET 78
L + VP F MD +LLDAICERL +L T+ YI+REGDPV EM FI+ G LES T
Sbjct: 250 LLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESST 309
Query: 79 TDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTVKALTEVEAFALCAEEL 138
T+GGR+GFFN LK G FCG+ELL WAL PK N P+STRTVKAL EVEAFAL AE+L
Sbjct: 310 TNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDL 369
Query: 139 KFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKRKMAEQHRKEEEAANRQ 198
KFVA+QFRRLHS+++QHTFR+YS HWRTWA+CFIQAAWRRY +RKMA E + +
Sbjct: 370 KFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMR 429
Query: 199 S--SSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPKPPEPDFAVD 249
S S+ S A + + + +G ++ + +L KP EPDF+ +
Sbjct: 430 SDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKE-----LPKLRKPDEPDFSAE 477
>Os08g0254600 Cyclic nucleotide-binding domain containing protein
Length = 230
Score = 208 bits (529), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/162 (62%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
Query: 26 RVPLFENMDERLLDAICERLRPTLYTENEYILREGDPVDEMHFILHGCLESETTDGGRSG 85
+VP F MD +LLDAICER+ L TE YI REGDPV M FI+ G LES TTDGGR+G
Sbjct: 2 QVPFFSAMDHQLLDAICERMTYFLRTEGTYITREGDPVKVMLFIIRGKLESSTTDGGRTG 61
Query: 86 FFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTVKALTEVEAFALCAEELKFVASQF 145
FFN + LK G FCG+ELLTWAL P S ++P+STRTVK + E+EAF+L A+++K VAS F
Sbjct: 62 FFNSIILKPGDFCGEELLTWALLPSSRDSYPSSTRTVKTIAELEAFSLQADDIKCVASTF 121
Query: 146 RRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKR-KMAE 186
R +HS+ +QHTFR +S WRTWAA FIQ+AWRR R KMAE
Sbjct: 122 RMMHSKHLQHTFRLHSYQWRTWAARFIQSAWRRRQNRQKMAE 163
>Os03g0758300 Similar to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic
nucleotide-and calmodulin-regulated ion channel 2)
(DEFENSE NO DEATH 1)
Length = 618
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Query: 3 LVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDP 62
+++ LP+ LRRDIKR+LCL LVK+VPLF MD+ +LD IC+RLRP +++ E ++REGDP
Sbjct: 399 MIKDLPEGLRRDIKRYLCLELVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDP 458
Query: 63 VDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTV 122
V M F+L G L S T G L G F GDELL+W L S PAS+ T
Sbjct: 459 VQRMVFVLQGKLRS--TQPLAKGVVATCMLGAGNFLGDELLSWCLRRPSLDRLPASSATF 516
Query: 123 KALTEVEAFALCAEELKFVASQFR-RLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYK 181
+ + +AF L A +L+F+ QFR + + +++ T R+YS +WRTWAA IQ AWRRY
Sbjct: 517 ECVETAQAFCLDAPDLRFITEQFRYKFANEKLKRTARYYSSNWRTWAAVNIQLAWRRYKA 576
Query: 182 RKMAE 186
R +
Sbjct: 577 RTTTD 581
>Os01g0782700 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 666
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 3 LVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDP 62
+V+ LP+ LRRDIK HLCL LV++VPLF++MD+ +L+ IC+R++ ++ + E I+REGDP
Sbjct: 442 IVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDP 501
Query: 63 VDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTV 122
V M FI+ G L+S R+G + L G F GDELL+W + PAS+ T+
Sbjct: 502 VQRMLFIVRGHLQSSQVL--RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTL 559
Query: 123 KALTEVEAFALCAEELKFVASQFRRLHSR-QVQHTFRFYSQHWRTWAACFIQAAWRRYYK 181
+ EAF L A ++K+V FR + +V+ + R+YS WRTWAA +Q AWRRY
Sbjct: 560 VTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKH 619
Query: 182 RK 183
RK
Sbjct: 620 RK 621
>Os05g0502000 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 691
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 3/183 (1%)
Query: 2 NLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGD 61
+V+ LP+ LRRDIK HLCL LV++VPLF +MD+ +L+ IC+R++ ++ + E I+REGD
Sbjct: 468 QIVRDLPEGLRRDIKYHLCLDLVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGD 527
Query: 62 PVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRT 121
PV M FI+ G L+ R+G + L G F GDELL+W + PAS+ T
Sbjct: 528 PVQRMLFIVRGHLQCSQVM--RNGATSWCTLGPGNFSGDELLSWCMRRPFMERLPASSST 585
Query: 122 VKALTEVEAFALCAEELKFVASQFR-RLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
+ EAF L A ++K+V FR S +V+ + R+YS WRTWAA +Q AWRRY
Sbjct: 586 LVTAESTEAFGLEAGDVKYVTQHFRYTFTSDKVRRSARYYSHGWRTWAAVAVQLAWRRYK 645
Query: 181 KRK 183
RK
Sbjct: 646 HRK 648
>Os02g0773400 Ion transport domain containing protein
Length = 772
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 120/213 (56%), Gaps = 22/213 (10%)
Query: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
E L+ LP+D++RDI+RH + +V LF MD +LDAIC++LR LY IL +G
Sbjct: 554 EELLSNLPEDIQRDIRRHF-FRFLNKVRLFTLMDWPILDAICDKLRQNLYISGSDILYQG 612
Query: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPA--- 117
PV++M FI+ G LES + DG +K L EG CG+ELLTW L+ SA
Sbjct: 613 GPVEKMVFIVRGKLESISADG------SKAPLHEGDVCGEELLTWYLEHSSANRDGGRMR 666
Query: 118 -------STRTVKALTEVEAFALCAEELKFVASQFRR-LHSRQVQHTFRFYSQHWRTWAA 169
+ RTV+ LT VEAF L A +L+ V SQF R L + +VQ R+ S +WRT AA
Sbjct: 667 FHGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFSRFLRNPRVQGAIRYESPYWRTIAA 726
Query: 170 CFIQAAWRRYYKRKMAEQHRKEEEAANRQSSSS 202
IQ AW RY R++ R N QS +S
Sbjct: 727 TRIQVAW-RYRNRRL---KRAGMSKLNDQSYNS 755
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,216,322
Number of extensions: 377903
Number of successful extensions: 1271
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1249
Number of HSP's successfully gapped: 14
Length of query: 252
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 154
Effective length of database: 11,918,829
Effective search space: 1835499666
Effective search space used: 1835499666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)