BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0718100 Os03g0718100|AK100267
(377 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0718100 Actin 1 785 0.0
Os05g0106600 Similar to Actin 97 761 0.0
Os11g0163100 Similar to Actin 7 (Actin 2) 761 0.0
Os03g0836000 Similar to Actin 7 (Actin 2) 760 0.0
Os10g0510000 actin [Oryza sativa (japonica cultivar-group)] 757 0.0
AK059967 728 0.0
Os05g0438800 Similar to Actin 1 724 0.0
Os12g0163700 Similar to Actin 7 (Actin 2) 704 0.0
Os12g0641000 Similar to Actin 1 494 e-140
Os01g0964400 Similar to Actin 7 (Actin 2) 318 4e-87
Os08g0369300 Similar to ARP2 (Actin-related protein 2) 295 3e-80
Os01g0866100 Similar to Actin 4 288 4e-78
Os08g0137200 Actin/actin-like family protein 264 8e-71
Os02g0596900 Actin/actin-like family protein 234 9e-62
Os01g0269900 Actin/actin-like family protein 199 2e-51
D21122 132 3e-31
Os08g0128300 Similar to Actin-like protein 3 (Actin-related... 122 4e-28
AK110272 117 1e-26
Os03g0783000 Similar to Actin-related protein 7 87 1e-17
>Os03g0718100 Actin 1
Length = 377
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/377 (100%), Positives = 377/377 (100%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
Query: 361 KAEYDESGPSIVHRKCF 377
KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377
>Os05g0106600 Similar to Actin 97
Length = 377
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/377 (96%), Positives = 371/377 (98%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
DLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKL+Y+ALDY+QE+ETAK SSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSVEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
SYELPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 361 KAEYDESGPSIVHRKCF 377
K EYDESGP+IVHRKCF
Sbjct: 361 KDEYDESGPAIVHRKCF 377
>Os11g0163100 Similar to Actin 7 (Actin 2)
Length = 377
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/377 (96%), Positives = 371/377 (98%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALDY+QE+E AK+SSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELEAAKSSSSVEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
SYELPDGQVITIGAERFRCPEVLFQPSFIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 361 KAEYDESGPSIVHRKCF 377
K EYDESGP+IVHRKCF
Sbjct: 361 KGEYDESGPAIVHRKCF 377
>Os03g0836000 Similar to Actin 7 (Actin 2)
Length = 377
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/377 (96%), Positives = 371/377 (98%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALDY+QE+ETAK+SSSVEK
Sbjct: 181 DLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
SYELPDGQVITIGAERFRCPEVLFQPS IGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 361 KAEYDESGPSIVHRKCF 377
K EYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377
>Os10g0510000 actin [Oryza sativa (japonica cultivar-group)]
Length = 377
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/377 (94%), Positives = 373/377 (98%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFETF+ PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
DLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKL+Y+ALDY+QE+ETAK+SSSVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
SYELPDGQVITIGAERFRCPEV+FQPS IGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300
Query: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360
Query: 361 KAEYDESGPSIVHRKCF 377
+AEY+ESGP+IVHRKCF
Sbjct: 361 RAEYEESGPAIVHRKCF 377
>AK059967
Length = 375
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/374 (91%), Positives = 362/374 (96%)
Query: 4 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
+++Q LV DNGTGM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSK
Sbjct: 2 GDEVQALVIDNGTGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 61
Query: 64 RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 123
RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 184 GRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYE 243
GRDLTDYLMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD++QEM TA +SS++EKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYE 241
Query: 244 LPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSG 303
LPDGQVITIG ERFR PE LFQPSF+GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLSG
Sbjct: 242 LPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSG 301
Query: 304 GTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAE 363
GTTMFPGIADRM KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K E
Sbjct: 302 GTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 361
Query: 364 YDESGPSIVHRKCF 377
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
>Os05g0438800 Similar to Actin 1
Length = 376
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/377 (90%), Positives = 367/377 (97%), Gaps = 1/377 (0%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MAD-EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 59
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Q+KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE+HPVLLTEAPLNPKANREK
Sbjct: 60 QAKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREK 119
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY LPHAILRL
Sbjct: 120 MTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYTLPHAILRL 179
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240
DLAGRDLTD+LMKILTERGYS TT+AEREIVRD+KEKL+Y+ALDY+QE+ET+++SSSVEK
Sbjct: 180 DLAGRDLTDHLMKILTERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETSRSSSSVEK 239
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
SYE+PDGQVITIG+ERFRCPEVLFQPS +GME+ GIHE TYNSIMKCDVDIRKDLYGN+V
Sbjct: 240 SYEMPDGQVITIGSERFRCPEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVV 299
Query: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
LSGG+TMFPGIADRMSKEIT+LAPSSMK+KV+APPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 300 LSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 361 KAEYDESGPSIVHRKCF 377
K EYDESGP IVH KCF
Sbjct: 360 KGEYDESGPGIVHMKCF 376
>Os12g0163700 Similar to Actin 7 (Actin 2)
Length = 363
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/380 (90%), Positives = 353/380 (92%), Gaps = 20/380 (5%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE K
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------K 103
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
MTQIMFE+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
Query: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETA---KTSSS 237
DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALDY+QE+ A K SSS
Sbjct: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSS 223
Query: 238 VEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
VEKSYELPDGQVITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYG
Sbjct: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
Query: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
N+VLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
Query: 358 WIAKAEYDESGPSIVHRKCF 377
WI+KAEYDESGP+IVHRKCF
Sbjct: 344 WISKAEYDESGPAIVHRKCF 363
>Os12g0641000 Similar to Actin 1
Length = 243
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/243 (96%), Positives = 239/243 (98%)
Query: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
TLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 1 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 60
Query: 128 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187
TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 61 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 120
Query: 188 TDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDG 247
TDYLMKILTERGYSFTTTAEREIVRD+KEKLSYIALD+DQEM TA T SSVEKSYELPDG
Sbjct: 121 TDYLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFDQEMATAATGSSVEKSYELPDG 180
Query: 248 QVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTM 307
QVITIGAERFRCPEVLFQPSF+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTM
Sbjct: 181 QVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTM 240
Query: 308 FPG 310
FPG
Sbjct: 241 FPG 243
>Os01g0964400 Similar to Actin 7 (Actin 2)
Length = 222
Score = 318 bits (815), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/151 (98%), Positives = 149/151 (98%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTT 151
MTQIMFETFN PAMYVAIQAVLSLYASGRTT
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 76/80 (95%)
Query: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
++ SG TTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 143 SLYASGRTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 202
Query: 358 WIAKAEYDESGPSIVHRKCF 377
WI+K EYDESGP+IVHRKCF
Sbjct: 203 WISKDEYDESGPAIVHRKCF 222
>Os08g0369300 Similar to ARP2 (Actin-related protein 2)
Length = 441
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 220/370 (59%), Gaps = 37/370 (10%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGIL 67
+VCDNGTG VK GFAG++ P +VFP +VGRP R+ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
+ YP+ +GIV +WDDM IW H FY+EL+V P E +LLT+ PLNP NREKM + MFE
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFE 126
Query: 128 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187
+N +++ +QAVLSLYA G TG+V+DSGDGV+H VP+ +G++ PH R+++AGR +
Sbjct: 127 KYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHI 186
Query: 188 TDYLMKILTERG-YSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPD 246
T YL+ +L+ RG S +RE + + DY +E + ++ + KSY LPD
Sbjct: 187 TSYLVDLLSRRGLLSHFIELKRE---------NMYSYDYKREYQLGLETTILVKSYTLPD 237
Query: 247 GQVITIGAERFRCPEVLFQP--------------SFIGMEAAGIHETTYNSIMKCDVDIR 292
G+VI +G ERF+ PE LF P I +E G+ + + I + D+D R
Sbjct: 238 GRVIKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNR 297
Query: 293 KDLYGNIVLSGGTTMFPGIADRMSKEI-----------TALAPSSMKIKVVAPPERKYSV 341
LY +IVLSGG+TM+PG+ R+ KE+ +++++ PP RK+ V
Sbjct: 298 MTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMV 357
Query: 342 WIGGSILASL 351
++GG++LA +
Sbjct: 358 YLGGAVLAGI 367
>Os01g0866100 Similar to Actin 4
Length = 203
Score = 288 bits (737), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 132/139 (94%), Positives = 136/139 (97%)
Query: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 63
Query: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQI 123
Query: 125 MFETFNTPAMYVAIQAVLS 143
MFETFN PAMYVAIQ + S
Sbjct: 124 MFETFNCPAMYVAIQTMAS 142
>Os08g0137200 Actin/actin-like family protein
Length = 443
Score = 264 bits (674), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 237/445 (53%), Gaps = 72/445 (16%)
Query: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
M +++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASD 60
Query: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 61 SKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
Query: 96 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 155
L + PEEHP+L+ E N REK ++MFE + PA+++A AVL+ +ASGR T +V+
Sbjct: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
Query: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSFT------ 203
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
Query: 204 -----------TTAE-------REIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELP 245
T E R I D+KE + + E+ A ++ SYELP
Sbjct: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELP 297
Query: 246 DGQVITIGAERFRCPEVLFQPSFI-----------GMEAAGIHETTYNSIMKCDVDIRKD 294
DGQ I +GA+RF+ P++LF PS M G+ +S+ +CDVDIRK+
Sbjct: 298 DGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKE 357
Query: 295 LYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL 351
L +I+LSGG++ + +R+ KE+ + + ++KV+A ER++SVWIGGSILASL
Sbjct: 358 LLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASL 417
Query: 352 STFQQMWIAKAEYDESGPSIVHRKC 376
+FQQMW +KAEY+E G S + RKC
Sbjct: 418 GSFQQMWFSKAEYEEHGVSYIQRKC 442
>Os02g0596900 Actin/actin-like family protein
Length = 428
Score = 234 bits (596), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 208/422 (49%), Gaps = 57/422 (13%)
Query: 3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HT 43
DA +V DNGTG K GFAG+ P + P++V G+ R
Sbjct: 2 DAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSA 61
Query: 44 GVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP 100
GVM + D ++G++A ++ L YPI +G V NWD ME+ W +N LR P
Sbjct: 62 GVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDP 118
Query: 101 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVL 155
E+H LLTE+PL P RE +IMFETFN P +Y+A Q VL+L A T TG+V+
Sbjct: 119 EDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVV 178
Query: 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMK 215
D GDG +H VP+ +GY + +I + + G+D+T ++ ++L ERG ++ R +K
Sbjct: 179 DVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVK 238
Query: 216 EKLSYIALDYDQEMETAKTSSSVEKSYELPDG--------QVITIGAERFRCPEVLFQPS 267
E Y D +E K K + G IG ERF PE+ F P
Sbjct: 239 EMYCYTCSDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPE 296
Query: 268 FIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS 326
+ +H I +D R+ LY NIVLSGG+TMF R+ +++ + +
Sbjct: 297 IYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDAR 356
Query: 327 ----------------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPS 370
+++ VV+ P ++Y+VW GGS+LAS + F + KAEY+E G S
Sbjct: 357 VLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGAS 416
Query: 371 IV 372
I
Sbjct: 417 IC 418
>Os01g0269900 Actin/actin-like family protein
Length = 429
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 202/431 (46%), Gaps = 73/431 (16%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GI 66
+V DNG G++KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTG 59
Query: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
+TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++F
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
Query: 127 ETFNTPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 178
E ++ VA +++ LY + R +V+D G +H P+ + + L +A+
Sbjct: 120 EELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVR 179
Query: 179 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSS- 237
R+DL G+ LT+YL ++++ R S E ++ D KEKL +++LD ++ A+ SS+
Sbjct: 180 RMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSND 237
Query: 238 --VEKSYELPDG------------------------------------------------ 247
SY LPDG
Sbjct: 238 NPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELS 297
Query: 248 -QVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTT 306
+ ERF PE+LF P +GM AG+ E +I C ++ L+ I+L+GG+T
Sbjct: 298 QNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGST 357
Query: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
+FP +R+ KE+ L P ++K++A + W GGS+LA F+ M I K+EY+E
Sbjct: 358 LFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEE 417
Query: 367 SGPSIVHRKCF 377
G R+ F
Sbjct: 418 MGSMRCRRRFF 428
>D21122
Length = 120
Score = 132 bits (333), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/96 (63%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
PIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR KM MFETF
Sbjct: 1 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRXKMPXXMFETFKC 60
Query: 132 PAMYVAIQAV-LSLYASGRTTGIVLDSGDGVSHTVP 166
+ + +++ VL SGDG + TVP
Sbjct: 61 TSNVCGYSSCSFTIWQWSYXQVFVLXSGDGXTXTVP 96
>Os08g0128300 Similar to Actin-like protein 3 (Actin-related protein 3)
Length = 180
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 24/165 (14%)
Query: 3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR------------------HTG 44
DA +V DNGTG K GF+G+ P P++V + G
Sbjct: 2 DAATRPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAG 61
Query: 45 VMVGMGQKDAYVGDEAQS---KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE 101
VM + D ++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PE
Sbjct: 62 VMADL---DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPE 118
Query: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 146
EH LLT++P++ +RE +IMFETFN P +Y+++Q+VLSL A
Sbjct: 119 EHYFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
>AK110272
Length = 98
Score = 117 bits (293), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/59 (88%), Positives = 57/59 (96%)
Query: 319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 40 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 98
>Os03g0783000 Similar to Actin-related protein 7
Length = 162
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 17/171 (9%)
Query: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
++ +V D G+ ++KAG A D +P V PS + + +D +GD A +
Sbjct: 1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVE-- 48
Query: 66 ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQI 124
+ P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+
Sbjct: 49 --EVVQPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQL 106
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
MFE FN Y + QAVLSLYA GR +G +D G G P+ EG A+ H
Sbjct: 107 MFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEG-AVQH 156
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,363,697
Number of extensions: 563034
Number of successful extensions: 1174
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1155
Number of HSP's successfully gapped: 21
Length of query: 377
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 274
Effective length of database: 11,657,759
Effective search space: 3194225966
Effective search space used: 3194225966
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)