BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0681700 Os03g0681700|AK111767
(316 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0681700 Similar to Yarrowia lipolytica chromosome E of... 662 0.0
Os03g0725400 Similar to WD-repeat protein 5 (BMP2-induced 3... 94 2e-19
Os11g0594200 Similar to Notchless gene homolog 88 6e-18
Os01g0780400 WD40-like domain containing protein 88 9e-18
Os10g0104500 Similar to Notchless-related 87 2e-17
AK110547 81 1e-15
Os04g0592700 Quinonprotein alcohol dehydrogenase-like domai... 81 1e-15
Os03g0746600 WD40-like domain containing protein 76 3e-14
Os03g0339100 Similar to PRL1 protein 74 2e-13
AK108888 73 3e-13
Os03g0685600 WD40-like domain containing protein 72 4e-13
Os07g0405100 Similar to F-box-like/WD-repeat protein ebi 72 4e-13
Os05g0552300 Similar to Guanine nucleotide-binding protein ... 72 5e-13
Os10g0494800 Similar to Katanin p80 WD40-containing subunit... 72 6e-13
Os07g0572000 WD40-like domain containing protein 72 7e-13
Os07g0205200 Similar to Transcription initiation factor TFI... 72 7e-13
AK110077 70 1e-12
Os06g0143900 Similar to Coatomer protein complex, beta prime 70 2e-12
Os01g0686800 Guanine nucleotide-binding protein beta subuni... 69 6e-12
AK111235 68 9e-12
Os03g0754900 Similar to Cleavage stimulation factor 50K cha... 68 1e-11
Os01g0322800 WD40-like domain containing protein 67 1e-11
Os03g0151700 Similar to WD repeat protein (Fragment) 66 3e-11
AK111547 66 4e-11
Os06g0598900 Similar to Serine-threonine kinase receptor-as... 66 4e-11
Os03g0711400 Similar to Coatomer alpha subunit 65 6e-11
Os09g0127800 Similar to Coatomer alpha subunit 65 7e-11
>Os03g0681700 Similar to Yarrowia lipolytica chromosome E of strain CLIB99 of
Yarrowia lipolytica
Length = 316
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MAQPSVILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRL 60
MAQPSVILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRL
Sbjct: 1 MAQPSVILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRL 60
Query: 61 FDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA 120
FDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA
Sbjct: 61 FDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA 120
Query: 121 AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA 180
AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA
Sbjct: 121 AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA 180
Query: 181 NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK 240
NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK
Sbjct: 181 NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK 240
Query: 241 IWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYTSHHK 300
IWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYTSHHK
Sbjct: 241 IWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYTSHHK 300
Query: 301 PVVCCALHDGAESAPS 316
PVVCCALHDGAESAPS
Sbjct: 301 PVVCCALHDGAESAPS 316
>Os03g0725400 Similar to WD-repeat protein 5 (BMP2-induced 3-kb gene protein)
(WD-repeat protein BIG-3)
Length = 324
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 123/300 (41%), Gaps = 40/300 (13%)
Query: 30 TLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCD 89
TL ++ ++ +PD R LA+A + S+ PV H V + F D
Sbjct: 14 TLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPD 73
Query: 90 GNWMYSGSEDGTVRIWDLRTATCQREYESRAAVNTVVLH----------PNQKELISGDQ 139
G + S S+D TVRIWDL + T+ H P+ L SG
Sbjct: 74 GRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSF 133
Query: 140 NGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTIT 199
+ +RVW++ + C ++P V S+ DG+M+V+ + G C +W
Sbjct: 134 DETVRVWEVRSGRC-LRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIW---------- 182
Query: 200 CFEPLHKLQAHDGYILKCLLSPE--------FCDPNRYLATASSDHTVKIWNVDGFKLEK 251
+ G+ +K L+ E F +++ A+ D +++WN K K
Sbjct: 183 --------DSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLK 234
Query: 252 TLVGH--QRWVWDCVFSV-DGAYLITASSDTTARLWTMSTGEAIRVYTSHHKPVVCCALH 308
T GH ++ FS+ +G Y+++ S D +W + + + ++ H V+ + H
Sbjct: 235 TYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCH 294
>Os11g0594200 Similar to Notchless gene homolog
Length = 480
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 58/317 (18%)
Query: 26 RCYRTLQ-HTESHINRLEITPDKRFLAA-AGNPHIRLFDINSNSNHPVISYDSHTSNVMA 83
RC T+ HTE+ + + +PD R LA+ +G+ +R +D+N+ + P+ + H + V+
Sbjct: 106 RCSATIAGHTEA-VLAVSFSPDGRCLASGSGDTTVRFWDLNTQT--PLFTCKGHKNWVLC 162
Query: 84 VGFHCDGNWMYSGSEDGTVRIWDLRTA-------TCQREYESRAAVNTVVLHPNQKELIS 136
+ + DGN + SGS+ G + +WD +T T R++ + + V L + +S
Sbjct: 163 IAWSPDGNHLVSGSKSGELILWDPKTGKQLGTPLTGHRKWITAVSWEPVHLQAPCRRFVS 222
Query: 137 GDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDG-SMVVAANNRGTCYVWRLLKGT 195
++G+ R+WD+ C L ++ V W G ++ + VW +G
Sbjct: 223 ASKDGDARIWDITTRKCVIALTGHTNSVT---CVKWGGDGLIYTGSEDCLIKVWETSQGK 279
Query: 196 QTITCFEPLHKLQAHDGYILKCLLSPEFC------------------------------- 224
T LQ H ++ LS E+
Sbjct: 280 LVKT-------LQGHGHWVNSLALSTEYILRTGAYDHTGKTYSTADEMKEAALARYKKMR 332
Query: 225 --DPNRYLATASSDHTVKIWNVDGFKLEKT-LVGHQRWVWDCVFSVDGAYLITASSDTTA 281
P R L + S D T+ +W K K + GHQ+ V FS DG +L +AS D +
Sbjct: 333 GNAPER-LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSV 391
Query: 282 RLWTMSTGEAIRVYTSH 298
+LW TG+ + + H
Sbjct: 392 KLWNGITGKFVAAFRGH 408
>Os01g0780400 WD40-like domain containing protein
Length = 838
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 15/226 (6%)
Query: 49 FLAAAGNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLR 108
F+ + + L+ I + P++S HT +V AV F + +GS +G++++WDL
Sbjct: 33 FITGGSDRKVNLWAIGKQT--PLLSLSGHTGSVEAVEFDTAEVLVLAGSSNGSIKLWDLE 90
Query: 109 TATCQREYES-RAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRS 167
A R R++ +V HP + SG + ++++WD+ C A+R+
Sbjct: 91 EAKVVRSLTGHRSSCTSVEFHPFGEFFASGSSDTDLKIWDIKKKGC-IHTYKGHRGAIRT 149
Query: 168 LTVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPN 227
+ DG VV VW L G + LH + H G I +C+ +F
Sbjct: 150 IRFTPDGRWVVTGGEDNIVKVWDLTAG-------KLLHDFKFHSGQI-RCI---DFHPQE 198
Query: 228 RYLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLI 273
LAT S+D TVK W+++ F+L + V VF DG L
Sbjct: 199 FLLATGSADRTVKFWDLETFELIGSAGPEATGVRSTVFHPDGKTLF 244
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 6 VILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAA-AGNPHIRLFDIN 64
V++ S + SIK W+ + + R+L S +E P F A+ + + ++++DI
Sbjct: 73 VLVLAGSSNGSIKLWDLEEAKVVRSLTGHRSSCTSVEFHPFGEFFASGSSDTDLKIWDIK 132
Query: 65 SNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRAA-VN 123
+ +Y H + + F DG W+ +G ED V++WDL +++ + +
Sbjct: 133 KKGC--IHTYKGHRGAIRTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLHDFKFHSGQIR 190
Query: 124 TVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNR 183
+ HP + L +G + ++ WDL PE T VRS DG + ++
Sbjct: 191 CIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPEA-TGVRSTVFHPDGKTLFCGLDQ 249
Query: 184 G-TCYVWRLLKGTQTITC-FEPLHKLQAHDGYILKC 217
+ W ++ + + L L ++G +L C
Sbjct: 250 SLKVFSWEPVRCHDVVDMGWSNLADLSIYEGKLLGC 285
>Os10g0104500 Similar to Notchless-related
Length = 480
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 58/317 (18%)
Query: 26 RCYRTLQ-HTESHINRLEITPDKRFLAA-AGNPHIRLFDINSNSNHPVISYDSHTSNVMA 83
RC T+ HTE+ + + +PD R LA+ +G+ +R +D+++ + P+ + H + V+
Sbjct: 106 RCSATIAGHTEA-VLAVSFSPDGRCLASGSGDTTVRFWDLSTQT--PLFTCKGHKNWVLC 162
Query: 84 VGFHCDGNWMYSGSEDGTVRIWDLRTA-------TCQREYESRAAVNTVVLHPNQKELIS 136
+ + DGN + SGS+ G + +WD +T T R++ + + V L + +S
Sbjct: 163 IAWSPDGNHLVSGSKSGELILWDPKTGKQLGTPLTGHRKWITAVSWEPVHLQSPCRRFVS 222
Query: 137 GDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDG-SMVVAANNRGTCYVWRLLKGT 195
++G+ R+WD+ C L ++ V W G ++ + + VW +G
Sbjct: 223 TSKDGDARIWDMTTRKCVIALTGHTNSVT---CVKWGGDGLIYTGSEDCSIKVWETSQGK 279
Query: 196 QTITCFEPLHKLQAHDGYILKCLLSPEFC------------------------------- 224
T LQ H ++ LS E+
Sbjct: 280 LVKT-------LQGHGHWVNSLALSTEYVLRTGAYDHTGKTYSTAEEMKEAALARYKKMR 332
Query: 225 --DPNRYLATASSDHTVKIWNVDGFKLEKT-LVGHQRWVWDCVFSVDGAYLITASSDTTA 281
P R L + S D T+ +W K K + GHQ+ V FS DG +L +AS D +
Sbjct: 333 GNAPER-LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSV 391
Query: 282 RLWTMSTGEAIRVYTSH 298
+LW TG+ + + H
Sbjct: 392 KLWNGITGKFVAAFRGH 408
>AK110547
Length = 412
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 7 ILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSN 66
+LATAS D S++ W G C + + ++ L P L A G+ ++ +
Sbjct: 141 LLATASLDSSVRVWRVADGSCVQAPEGPGDGVDWLAWHPKGDILLA-GSEDFTMWMWLAQ 199
Query: 67 SNHPVISYDSHTSNVMAVGFHCDGNWMYS--GSEDGTVRIWDLRTATCQREYESRA---- 120
+ + + + H+ V A F DG + S G D ++R+W+ +T C + + R
Sbjct: 200 TGNCMQVFSGHSGPVTAGAFTPDGKLVVSVGGENDCSLRVWNPKTGECTVQLQGRPFHED 259
Query: 121 AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA 180
++ + +HP+ +I+G Q+G++RV ++ + L D+ V + + A
Sbjct: 260 SITCLGVHPDGSVVITGAQDGSVRVSNIHNSRIVASLQGHEDS-VEAAGFSRHLPLAATA 318
Query: 181 NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK 240
G +W T+ C H+ I + + + +AT D V+
Sbjct: 319 GIDGKLIIWDCGNFTERGVC--------QHEQPITRMAWASQ----QPLVATGCLDGVVR 366
Query: 241 IWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLW 284
+W++ K + GH V D FS DG+ ++T S D TAR++
Sbjct: 367 LWDLRTSACVKQMHGHSSAVQDLTFSPDGSMVLTGSDDATARVF 410
>Os04g0592700 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 891
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 28/289 (9%)
Query: 29 RTLQHTESHINRLEITPDKRFLAAAGN-PHIRLFDINSNSNHPVISYDSHTSNVMAVG-- 85
R + + + ++ + D+++LA A N +R++D+ S S V+S HT V+ +
Sbjct: 361 RLVGYNDEILDLKFVGEDEQYLAVATNLEQVRVYDVASMSCSYVLS--GHTEIVVCIDTC 418
Query: 86 FHCDGNWMY-SGSEDGTVRIWDLRTATCQREYESR-AAVNTVVLHPNQKEL-ISGDQNGN 142
G + +GS+D TVR+WD+ +C + A+ +V K +SG +
Sbjct: 419 ISSSGKTLVVTGSKDSTVRLWDMERRSCIGIGKGHLGAIGSVAFSKKSKNFFVSGSSDRT 478
Query: 143 IRVW--DLAANSCSCEL-------VPEVDTAVRSLTVMWDGSMVVAANNRGTCYVWRLLK 193
I++W D + E+ V D + SL+V + +V + + T +W+L
Sbjct: 479 IKIWSWDDTLDDVGSEVPLKAKAVVAAHDKDINSLSVSPNDGLVCSGSEDRTACIWKLPN 538
Query: 194 GTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFKLEKTL 253
++ L+ H + + S EF + + T+S D TVKIW V KT
Sbjct: 539 LVPSVV-------LKGHK----RGIWSVEFSPVEQCVITSSGDRTVKIWAVADGSCLKTF 587
Query: 254 VGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYTSHHKPV 302
GH V F G ++ SD +LWT+ T E I + H V
Sbjct: 588 EGHTSSVLRASFLSHGTQFVSCGSDGLVKLWTIKTNECIATFDKHDGKV 636
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 38 INRLEITPDKRFLAAAGNPH-IRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSG 96
+ L ++PD R L AG+ IR++D+ S + S+ H + A+ H G + +
Sbjct: 80 VTALALSPDSRLLFTAGHSRLIRVWDLASRTCTR--SWKGHDGPIRAMACHASGGLLATA 137
Query: 97 SEDGTVRIWDLRTATCQREYESRAAV-NTVVLHPNQKELI--SGDQNGNIRVWDLAANSC 153
D V +WD+ C + A V TV+ H + K L+ SG ++ +RVW+L + C
Sbjct: 138 GADKKVCVWDVDGGFCTHFFRGHAGVVTTVMFHKDPKRLLLFSGSEDATVRVWNLESKKC 197
Query: 154 SCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVWRLLK--GTQTITCFEPLHKLQ--A 209
++ E +AV SL + DG +++A VW + K +TI FE + +
Sbjct: 198 -VAVLKEHFSAVTSLALSEDGQTLLSAGRDKIVNVWDVRKYNSKKTIPAFEMIEDVSFIG 256
Query: 210 HDGYILKCLLSPEFC--DPNRYLATASSDHTVKIW 242
+L CL P + Y T V+IW
Sbjct: 257 PGSNLLSCLGEPANIKRKTDGYFLTVGERGVVRIW 291
>Os03g0746600 WD40-like domain containing protein
Length = 511
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 20/241 (8%)
Query: 8 LATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSNS 67
L + D ++K W A +G TLQ +N L +T D +F+ AA + + +LF N
Sbjct: 245 LISGGQDQTVKIWSAHTGALTSTLQGCLGSVNDLAVTNDNKFVIAACSSN-KLFVWEVNG 303
Query: 68 NHPVISYDSHTSNVMAVGFHCDGNW-----MYSGSEDGTVRIWDLRTATCQREYESRAAV 122
P + HT NV +V D +W + S S D T++IWDL++ C+ S +
Sbjct: 304 GRPRHTLTGHTKNVSSV----DASWVKSCVLASSSNDHTIKIWDLQSGFCKSTIMSGSNA 359
Query: 123 NTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANN 182
N++ + L SG ++G++R+WD+ + C+ + +D V S++V + + ++ +
Sbjct: 360 NSLAF-IDGVTLCSGHRDGHLRLWDIRSAKCTSQTFAHLD--VSSVSVSRNRNFILTS-- 414
Query: 183 RGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIW 242
G V L C K +A ++ P +A ++D +V IW
Sbjct: 415 -GKDNVHNLFDPRTMEVC----GKFKAMGNRVVSSWGRPCISPDENSIAAGANDGSVYIW 469
Query: 243 N 243
+
Sbjct: 470 S 470
>Os03g0339100 Similar to PRL1 protein
Length = 472
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 25/302 (8%)
Query: 10 TASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGN-PHIRLFDINSNSN 68
T S D +IK W+ SG TL I L ++ +L +AG+ ++ +D+ N
Sbjct: 179 TGSADRTIKIWDLASGTLKLTLTGHIEQIRGLAVSQRHTYLFSAGDDKQVKCWDLEQNKV 238
Query: 69 HPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRT-ATCQREYESRAAVNTVVL 127
+ SY H S V + H + + +G D R+WD+RT A V +V
Sbjct: 239 --IRSYHGHLSGVYCLALHPTIDILLTGGRDSVCRVWDIRTKAHVSALTGHDNTVCSVFA 296
Query: 128 HPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCY 187
P ++++G + I+ WDL A C L +VR++ + A+ +
Sbjct: 297 RPTDPQVVTGSHDSTIKFWDLVAGRTMCTLT-HHKKSVRAM-ALHPKEKSFASASADNIK 354
Query: 188 VWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDG- 246
+ L KG E LH + + I+ + E + LAT + ++ W+
Sbjct: 355 KFSLPKG-------EFLHNMLSQQKTIINSMAVNE----DGVLATGGDNGSLWFWDWKSG 403
Query: 247 --FKLEKTLVG-----HQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYTSHH 299
F+ ++T+V + ++ + V G+ L+T +D T ++W + +
Sbjct: 404 HNFQQDQTIVQPGSLESEACIYALSYDVSGSRLVTCEADKTIKMWKEDLSATPETHPINF 463
Query: 300 KP 301
KP
Sbjct: 464 KP 465
>AK108888
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 136/304 (44%), Gaps = 42/304 (13%)
Query: 2 AQPSVILATASYDHSIKFWE-----AKSGRCYRTLQHTESHINRLEITPDKRF-LAAAGN 55
A P+ +L + S D ++ WE G R L+ ++ + I+ D ++ ++ + +
Sbjct: 29 ANPN-LLVSGSRDKTLITWEITREQGNYGFAKRALKGHSHFVSDVAISSDGQWAVSGSWD 87
Query: 56 PHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQRE 115
+RL+++N+ + + H +V++V F D + SGS D T+++W++ C+
Sbjct: 88 KTLRLWELNTGVSKAFVD---HQKDVLSVAFSPDNTKIISGSRDKTIKLWNI-LGECKYT 143
Query: 116 YESRAA---VNTVVLHPNQKE--LISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTV 170
+ V+ V P+ K+ +++ + ++VWDL+ LV + ++T+
Sbjct: 144 LTEQGHADWVSCVRFLPSAKKPVIVTAGWDRLVKVWDLSKWKLQTNLVGHTGV-INTITI 202
Query: 171 MWDGSMVVAANNRGTCYVWRLLKGTQ--TITCFEPLHKLQAHDGYILKCLLSPEFCDPNR 228
DGS+ + G +W L KG ++ +P++ L H P R
Sbjct: 203 APDGSLCASGGKDGVAMLWDLKKGEHLYSLDATDPINALVFH---------------PTR 247
Query: 229 YLATASSDHTVKIWNVDGFKLEKTLV-----GHQRWVWDCV---FSVDGAYLITASSDTT 280
Y A++ ++KIWN++ + LV + CV +S DG+ L + D
Sbjct: 248 YWLCAATQKSIKIWNLESKQPVAELVPEFKNAKTKSRAACVSLAWSSDGSALFSGYDDGL 307
Query: 281 ARLW 284
R+W
Sbjct: 308 IRVW 311
>Os03g0685600 WD40-like domain containing protein
Length = 394
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 24/288 (8%)
Query: 7 ILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSN 66
+LA+ S+D I W + TL+ + S L+ P + L AG+ L+ N++
Sbjct: 121 LLASGSFDGRINVWNTATRTLQGTLEGSGSGFEWLKWHP-RGHLIIAGSEDCNLWMWNAD 179
Query: 67 SNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA----AV 122
N + ++ H+S V F DG + +GS+D ++RIWD RTA + +
Sbjct: 180 HNAILNTFAGHSSTVTCGDFTPDGKLICTGSDDASLRIWDPRTAQSRHVVRGHGYHTDGL 239
Query: 123 NTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDT---AVRSLTVMWDGSMVVA 179
+ + + + ++SG ++ ++ V N S ++V +D ++ + + + V
Sbjct: 240 TCLSVTSDSQTIVSGSKDNSVCV----VNINSGQVVGSLDGHTGSIECVGISPSYNWVAT 295
Query: 180 ANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTV 239
+ +W L G Q+I C HD + + S + P+R++A+ D V
Sbjct: 296 GSMDQKLIIWDL--GRQSIRC------TCNHD----EGVTSLAWLGPSRFVASGCIDGMV 343
Query: 240 KIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMS 287
+IW+ + + GH V S DG +++ S+D +A ++ +S
Sbjct: 344 RIWDSLSGECVRAFAGHGDVVQSLAVSADGNSIVSVSTDGSALIFDIS 391
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 120/319 (37%), Gaps = 46/319 (14%)
Query: 28 YRTLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFH 87
Y HT+ I + +P L A+G R F S V+ HT V V F
Sbjct: 58 YAFRAHTD-EIFAVACSPTDASLVASGGKDDRGFLWKIGSAEDVLELAGHTDTVCTVAFS 116
Query: 88 CDGNWMYSGSEDGTVRIWDLRTATCQREYE-SRAAVNTVVLHPNQKELISGDQNGNIRVW 146
DGN + SGS DG + +W+ T T Q E S + + HP +I+G ++ N+ +W
Sbjct: 117 SDGNLLASGSFDGRINVWNTATRTLQGTLEGSGSGFEWLKWHPRGHLIIAGSEDCNLWMW 176
Query: 147 DLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVW--------RLLKG---- 194
+ N+ T V DG ++ ++ + +W +++G
Sbjct: 177 NADHNAILNTFAGHSST-VTCGDFTPDGKLICTGSDDASLRIWDPRTAQSRHVVRGHGYH 235
Query: 195 TQTITCF--------------------------EPLHKLQAHDGYILKCLLSPEFCDPNR 228
T +TC + + L H G I +SP +
Sbjct: 236 TDGLTCLSVTSDSQTIVSGSKDNSVCVVNINSGQVVGSLDGHTGSIECVGISPSY----N 291
Query: 229 YLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMST 288
++AT S D + IW++ G + + H V + ++ + D R+W +
Sbjct: 292 WVATGSMDQKLIIWDL-GRQSIRCTCNHDEGVTSLAWLGPSRFVASGCIDGMVRIWDSLS 350
Query: 289 GEAIRVYTSHHKPVVCCAL 307
GE +R + H V A+
Sbjct: 351 GECVRAFAGHGDVVQSLAV 369
>Os07g0405100 Similar to F-box-like/WD-repeat protein ebi
Length = 555
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 142/341 (41%), Gaps = 54/341 (15%)
Query: 7 ILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSN 66
+LA+ S D + + W G C Q + ++ L K F + ++ N
Sbjct: 221 LLASGSGDSTARIWTIPDGPCGSITQSSPPGVHVL-----KHFKGRTNEKSKDVTTLDWN 275
Query: 67 SNHPVI---SYDS-----------------HTSNVMAVGFHCDGNWMYSGSEDGTVRIWD 106
++ SYD H + ++ ++ G+++ SGS D T +WD
Sbjct: 276 GEGTLLATGSYDGQARIWNSDGELKQTLFKHKGPIFSLKWNKKGDFLLSGSVDKTAIVWD 335
Query: 107 LRTATCQREYESRAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVR 166
+T C++++E +A V N + + I V C++ + V+
Sbjct: 336 TKTWECKQQFEFHSAPTLDVDWRNNNSFATCSTDNMIYV---------CKIGDQ--RPVK 384
Query: 167 SLT--------VMWD--GSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILK 216
S + + WD GS++ + ++ T +W + K + + F K + Y ++
Sbjct: 385 SFSGHQSEVNAIKWDPTGSLLASCSDDWTAKIWSM-KQDKCVYDF----KEHTKEIYTIR 439
Query: 217 -CLLSPEFCDPNR--YLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLI 273
P +PN+ LA+AS D T+K+W V+ +L +L GH++ V+ FS G YL
Sbjct: 440 WSPTGPGTNNPNQQLLLASASFDSTIKLWEVEQGRLLYSLAGHRQPVYSVAFSPGGEYLA 499
Query: 274 TASSDTTARLWTMSTGEAIRVYTSHHKPVVCCALHDGAESA 314
+ S D +W++ G ++ Y C +G++ A
Sbjct: 500 SGSLDQCLHIWSVKEGRILKTYRGSGGIFEVCWNKEGSKIA 540
>Os05g0552300 Similar to Guanine nucleotide-binding protein beta subunit-like
protein (GPB-LR) (RWD)
Length = 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 41/284 (14%)
Query: 25 GRCYRTLQHTESHINRLEITPDKRF-LAAAGNPHIRLFDINSNSNHPVISYDSHTSNVMA 83
G YR L + + ++ D +F L+ + + +RL+D+ + + HT +V++
Sbjct: 66 GVSYRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATG--RTTRRFVGHTKDVLS 123
Query: 84 VGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRAA--------VNTVVLHPN--QKE 133
V F D + S + D T+++W+ C+ V+ V PN
Sbjct: 124 VAFSVDNRQIVSAARDNTIKLWN-TLGECKYTIGGDHGAGEGHTGWVSCVRFSPNPMAPT 182
Query: 134 LISGDQNGNIRVWDLAANSCSCELVPEVDT---AVRSLTVMWDGSMVVAANNRGTCYVWR 190
++SG + +++VW+L +C+L +++ V ++ V DGS+ + GT +W
Sbjct: 183 IVSGSWDRSVKVWNLT----NCKLRTKLEGHNGYVNAVAVSPDGSLCASGGKDGTTLLWD 238
Query: 191 LLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGF--- 247
L +G L+KL A G I+ L PNRY A+++ +VKIW+++
Sbjct: 239 LTEGKM-------LYKLDA--GAIIHSLC----FSPNRYWLCAATEDSVKIWDLESKLVM 285
Query: 248 -KLEKTLVGHQRWVWDCV---FSVDGAYLITASSDTTARLWTMS 287
L+ + + + C +S DG+ L +D T R+W +S
Sbjct: 286 QDLKPEVQAFKSQMLYCTSLSWSADGSTLFAGYTDGTIRVWKVS 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 77 HTSNVMAVGFHCDGN-WMYSGSEDGTVRIWDLRTATCQREYESRAA-------------- 121
H V A+ D + ++ S S D ++ +WD+ + + AA
Sbjct: 16 HNDMVTAIAAPIDNSPFIVSSSRDKSLLVWDITNPSTAVATDPEAAPPEYGVSYRRLTGH 75
Query: 122 ---VNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVV 178
V VVL + + +SG +G +R+WDLA + V V S+ D +V
Sbjct: 76 SHFVQDVVLSSDGQFALSGSWDGELRLWDLATGRTTRRFVGHTKD-VLSVAFSVDNRQIV 134
Query: 179 AANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHT 238
+A T +W L G T + H G++ SP P + + S D +
Sbjct: 135 SAARDNTIKLWNTL-GECKYTIGGDHGAGEGHTGWVSCVRFSPNPMAPT--IVSGSWDRS 191
Query: 239 VKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAI 292
VK+WN+ KL L GH +V S DG+ + D T LW ++ G+ +
Sbjct: 192 VKVWNLTNCKLRTKLEGHNGYVNAVAVSPDGSLCASGGKDGTTLLWDLTEGKML 245
>Os10g0494800 Similar to Katanin p80 WD40-containing subunit B1 (Katanin p80
subunit B1) (p80 katanin)
Length = 875
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 71 VISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYES-RAAVNTVVLHP 129
++S TS V +V F + +G+ GT++IWD+ A R + R++ ++ HP
Sbjct: 52 ILSLSGLTSPVESVSFDSSEAMIGAGASSGTIKIWDVDEAKVVRTFTGHRSSCASLDFHP 111
Query: 130 NQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMW---DGSMVVAANNRGTC 186
+ SG + N+++WD+ C + R + V+ DG +V+ + +
Sbjct: 112 FGEFFASGSSDTNMKIWDMRKKGC----IHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSV 167
Query: 187 YVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDG 246
+W L G + LH + H+G I CL +F LAT S+D TVK W+++
Sbjct: 168 KIWDLTAG-------KLLHDFRNHEGPI-NCL---DFHPHEFLLATGSADKTVKFWDLET 216
Query: 247 FKL 249
F+L
Sbjct: 217 FEL 219
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 25/228 (10%)
Query: 7 ILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAA-AGNPHIRLFDINS 65
++ + +IK W+ + RT S L+ P F A+ + + +++++D+
Sbjct: 73 MIGAGASSGTIKIWDVDEAKVVRTFTGHRSSCASLDFHPFGEFFASGSSDTNMKIWDMRK 132
Query: 66 NSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYES-RAAVNT 124
+ +Y HT + + F DG W+ SG D +V+IWDL ++ + +N
Sbjct: 133 KGC--IHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLHDFRNHEGPINC 190
Query: 125 VVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVD-------TAVRSLTVMWDG-SM 176
+ HP++ L +G + ++ WDL PE + VRS+T DG S+
Sbjct: 191 LDFHPHEFLLATGSADKTVKFWDLETFELIGSSGPENSREYFVPASVVRSMTFNKDGKSL 250
Query: 177 VVAANNRGTCYVWRLLKGTQTITCFE-------PLHKLQAHDGYILKC 217
+ W + I C + L L H+G +L C
Sbjct: 251 FCGLHESLKVLSW------EPIICHDVVDVGWSTLGDLIVHEGKLLGC 292
>Os07g0572000 WD40-like domain containing protein
Length = 338
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 40/287 (13%)
Query: 7 ILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPH-IRLFDI-- 63
+LATAS D ++ S TL+ ++ + + D +L +A + +R++D+
Sbjct: 39 LLATASLDGTVALLSPSSLAAIATLRGHADGVSDISWSTDSFYLCSASDDRTLRIWDVRP 98
Query: 64 -------------------NSNSNHPVISYDSHTSNVMAVGFHCDGN-WMYSGSEDGTVR 103
+ N++ + HT+ V + F+ N + SG D TVR
Sbjct: 99 VLAGLNPGSGGGGGGAQPADPNADRCIRVLKGHTNFVFSANFNPQTNSTVASGGFDCTVR 158
Query: 104 IWDLRTATCQREYESRA-AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVD 162
IWD+++ C R ++ + V +V + ++SG +G ++WD SC ++ E
Sbjct: 159 IWDVKSGRCVRAIDAHSEPVTSVHFIRDGSIIVSGSHDGTCKIWDAGTGSCLKTVIDEKK 218
Query: 163 TAVRSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILK--CLLS 220
AV +G ++ A L T + F L+ + G++ + CL S
Sbjct: 219 PAVSFSMFSPNGKFILVA----------ALDDTLKLCNFASGKFLKMYSGHVNRKYCLQS 268
Query: 221 PEFCDPNRYLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSV 267
+Y+ + S D+ V IW++ G + + L GH D V SV
Sbjct: 269 AFSVTNGKYIVSGSEDNCVYIWDLQGKNILQKLEGHT----DTVISV 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 5 SVILATASYDHSIKFWEAK-----------------------SGRCYRTLQHTESHINRL 41
S L +AS D +++ W+ + + RC R L+ + +
Sbjct: 79 SFYLCSASDDRTLRIWDVRPVLAGLNPGSGGGGGGAQPADPNADRCIRVLKGHTNFVFSA 138
Query: 42 EITPDKRFLAAAG--NPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSED 99
P A+G + +R++D+ S V + D+H+ V +V F DG+ + SGS D
Sbjct: 139 NFNPQTNSTVASGGFDCTVRIWDVKSG--RCVRAIDAHSEPVTSVHFIRDGSIIVSGSHD 196
Query: 100 GTVRIWDLRTATCQREY--ESRAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCEL 157
GT +IWD T +C + E + AV+ + PN K ++ + +++ + A+
Sbjct: 197 GTCKIWDAGTGSCLKTVIDEKKPAVSFSMFSPNGKFILVAALDDTLKLCNFASGKFLKMY 256
Query: 158 VPEVDTA--VRSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYIL 215
V+ ++S + +G +V+ + Y+W L+G L KL+ H ++
Sbjct: 257 SGHVNRKYCLQSAFSVTNGKYIVSGSEDNCVYIWD-LQGKNI------LQKLEGHTDTVI 309
Query: 216 KCLLSPEFCDPNRYLATA-SSDHTVKIWNVDG 246
P N+ + +D TV++W DG
Sbjct: 310 SVSCHPT---ENKIASGGLDNDRTVRLWLQDG 338
>Os07g0205200 Similar to Transcription initiation factor TFIID subunit 5
(Transcription initiation factor TFIID 100 kDa subunit)
(TAF(II)100) (TAFII-100) (TAFII100)
Length = 293
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 57/241 (23%)
Query: 49 FLAAAGNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLR 108
L+++ + IRL++ N+N ++ Y H V V F G++ S S D T RIW +
Sbjct: 57 LLSSSADSTIRLWNTKLNAN--LVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMD 114
Query: 109 TATCQREYESRAA-VNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRS 167
R + V+ V H N + +G + +R+WD+ C
Sbjct: 115 KIQPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQTGEC-------------- 160
Query: 168 LTVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPN 227
+ H +L +SP+
Sbjct: 161 ------------------------------------IRMFIGHRSMVLSLAMSPD----G 180
Query: 228 RYLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMS 287
RY+A+ D T+ +W++ + LVGH VW +S +GA L + S+D T +LW ++
Sbjct: 181 RYMASGDEDGTIMMWDISSGRCVSPLVGHNSCVWSLAYSCEGALLASGSADCTVKLWDVA 240
Query: 288 T 288
+
Sbjct: 241 S 241
>AK110077
Length = 1242
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 28/293 (9%)
Query: 7 ILATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRFLAAAGNPH-IRLFDINS 65
+LA++ ++ SI+ W ++G Y L+ + + + P + L + G+ + I+++ N
Sbjct: 25 LLASSLHNGSIQLWNYQTGTIYDRLEEHDGPVRGICFHPSQPLLVSGGDDYKIKVW--NH 82
Query: 66 NSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRA-AVNT 124
+ + + + H V V FH + W+ S S+D T+RIW+ ++ TC V
Sbjct: 83 KTRKCLFTLNGHLDYVRTVFFHHEHPWILSASDDQTIRIWNWQSRTCIAILTGHNHYVMC 142
Query: 125 VVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRG 184
HP ++S + +RVWD++ + + +T+ + +++ +A N G
Sbjct: 143 AQFHPKDDLIVSASMDQTVRVWDISG-------LRKKNTSAQPMSI----EEQIARANSG 191
Query: 185 TCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNV 244
L T + + L+ HD I P + +A D +K+W +
Sbjct: 192 QA---DLFGNTDAMVKY----VLEGHDRGINWASFHPTLP----LIVSAGDDRQIKLWRM 240
Query: 245 DGFKL--EKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVY 295
K T GH V +F ++I+ + D T R+W M A++ +
Sbjct: 241 SDSKAWEVDTCRGHFNNVSSALFHPRHEFIISDAEDKTIRVWDMGKRTAVQTF 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 71 VISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATC-QREYESRAAVNTVVLHP 129
+ ++S ++ V + FH + S +G++++W+ +T T R E V + HP
Sbjct: 4 LTKFESKSNRVKGIAFHPRLPLLASSLHNGSIQLWNYQTGTIYDRLEEHDGPVRGICFHP 63
Query: 130 NQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVW 189
+Q L+SG + I+VW+ C L +D VR++ + +++A++ T +W
Sbjct: 64 SQPLLVSGGDDYKIKVWNHKTRKCLFTLNGHLDY-VRTVFFHHEHPWILSASDDQTIRIW 122
Query: 190 RLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFKL 249
Q+ TC + L H+ Y++ P+ + + +AS D TV++W++ G +
Sbjct: 123 NW----QSRTC---IAILTGHNHYVMCAQFHPK----DDLIVSASMDQTVRVWDISGLRK 171
Query: 250 EKT--------------------------------LVGHQRWVWDCVFSVDGAYLITASS 277
+ T L GH R + F +++A
Sbjct: 172 KNTSAQPMSIEEQIARANSGQADLFGNTDAMVKYVLEGHDRGINWASFHPTLPLIVSAGD 231
Query: 278 DTTARLWTMSTGEAIRVYT 296
D +LW MS +A V T
Sbjct: 232 DRQIKLWRMSDSKAWEVDT 250
>Os06g0143900 Similar to Coatomer protein complex, beta prime
Length = 907
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 74 YDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYE-SRAAVNTVVLHPNQK 132
+ + V +V H W+ S G+V IWD ++ T + +E S V + ++
Sbjct: 11 FAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRKQ 70
Query: 133 ELISGDQNGNIRVWDLAANSCSCELVPEVDTA-VRSLTVMWDGSMVVAANNRGTCYVWRL 191
+++G + IRV++ N+ V E T +R + V V+++++ +W
Sbjct: 71 WVVAGADDMFIRVYNY--NTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 192 LKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFKLEK 251
KG FE H Y+++ +P+ D N + A+AS D T KIW++
Sbjct: 129 DKGWMCTQIFE------GHSHYVMQVTFNPK--DTNTF-ASASLDRTTKIWSLGSPDPNF 179
Query: 252 TLVGHQRWVWDCVFSVDGA---YLITASSDTTARLWTMSTGEAIRVYTSHHKPVVCCALH 308
TL GHQ+ V +CV G YLIT S D+TA++W T ++ H + H
Sbjct: 180 TLDGHQKGV-NCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFH 238
>Os01g0686800 Guanine nucleotide-binding protein beta subunit-like protein
(GPB-LR) (RWD)
Length = 334
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 77 HTSNVMAVGFHCDGN-WMYSGSEDGTVRIWDLRTATCQREYESRAA-------------- 121
H V A+ D + ++ S S D ++ +WDL T Q E A
Sbjct: 17 HNDVVTAIATPIDNSPFIVSSSRDKSLLVWDL-TNPVQNVGEGAGASEYGVPFRRLTGHS 75
Query: 122 --VNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVA 179
V VVL + + +SG +G +R+WDL+ + V D V S+ D +V+
Sbjct: 76 HFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGH-DKDVLSVAFSVDNRQIVS 134
Query: 180 ANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTV 239
A+ T +W L G T L + H+G++ SP P + + S D TV
Sbjct: 135 ASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPT--IVSGSWDRTV 191
Query: 240 KIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYT 296
K+WN+ KL L GH +V S DG+ + D LW ++ G+ R+Y+
Sbjct: 192 KVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK--RLYS 246
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 135/315 (42%), Gaps = 49/315 (15%)
Query: 5 SVILATASYDHSIKFWE--------------AKSGRCYRTLQHTESHINRLEITPDKRF- 49
S + ++S D S+ W+ ++ G +R L + + ++ D +F
Sbjct: 31 SPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHSHFVQDVVLSSDGQFA 90
Query: 50 LAAAGNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRT 109
L+ + + +RL+D+++ + H +V++V F D + S S D T+++W+
Sbjct: 91 LSGSWDGELRLWDLSTGVT--TRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWN-TL 147
Query: 110 ATCQREYESRAA--------VNTVVLHPN--QKELISGDQNGNIRVWDLAANSCSCELVP 159
C+ V+ V PN Q ++SG + ++VW+L C L
Sbjct: 148 GECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEG 207
Query: 160 EVDTAVRSLTVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLL 219
V ++ V DGS+ + G +W L +G + L+ L A G I+ L
Sbjct: 208 H-GGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKR-------LYSLDA--GSIIHSLC 257
Query: 220 SPEFCDPNRYLATASSDHTVKIWNVDGFKLEKTL-----VGHQRWVW--DCVFSVDGAYL 272
PNRY A++ ++KIW+++ + + L V + ++ +S DG+ L
Sbjct: 258 ----FSPNRYWLCAATQDSIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTL 313
Query: 273 ITASSDTTARLWTMS 287
+D T R++ +S
Sbjct: 314 YAGYTDGTIRIYKIS 328
>AK111235
Length = 351
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 18/232 (7%)
Query: 16 SIKFWEAKSG--RCYRTLQHTESHINRLEITPDKRFLAAAGNPHIRLFDINSNSNHPVIS 73
SI A+ G R R L +++ DKR ++G+ L+D+ + S V
Sbjct: 132 SIYNLSAREGPTRVARELSGHSGYLSCCRFISDKRIPTSSGDMTCVLWDLETGSK--VHE 189
Query: 74 YDSHTSNVMAVGFH-CDGNWMYSGSEDGTVRIWDLRTATCQREYESR-AAVNTVVLHPNQ 131
+ H +VM++ + D N SG+ D ++WD+R C + + + + +N + PN
Sbjct: 190 FADHLGDVMSLSINPLDHNQFVSGACDAFAKLWDIRQQKCVQTFAAHDSDINAIQFFPNG 249
Query: 132 KELISGDQNGNIRVWDLAAN-SCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVWR 190
+G + + R++D+ A+ + +PE + S+ G ++ A + C VW
Sbjct: 250 NAFGTGSDDASCRLFDIRADRELASYQIPEPVCGITSVAFSVSGRLLFAGYDDFECKVWD 309
Query: 191 LLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIW 242
+L+G E + LQ HD + CL + L T S D ++IW
Sbjct: 310 VLRG-------ERVGTLQGHDNRV-SCL---GVSNDALSLCTGSWDSMLRIW 350
>Os03g0754900 Similar to Cleavage stimulation factor 50K chain (Cleavage
stimulation factor 50)
Length = 470
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 36/293 (12%)
Query: 32 QHTESHINRL---EITPDKRFLAA-AGNPHIRLFDI-----------NSNSNHPVI-SYD 75
+H H N + + +PD ++ A+ +G+ I+ F++ PVI ++
Sbjct: 157 RHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFY 216
Query: 76 SHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREY---ESRAAVNTVVLHPNQK 132
HT + + FH + + S ++D T+R +D ++ + + V +V HP
Sbjct: 217 DHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQDTHNVRSVCFHPCGD 276
Query: 133 ELISGDQNGNIRVWDLAANSCSCELVP---EVDTAVRSLTVMWDGSMVVAANNRGTCYVW 189
L++G + ++D+ N+ +C L + + A+ + GS+ V A+ G+ +W
Sbjct: 277 YLLAGTDHPVAHLYDI--NTFTCYLSANSHDSNAAINQVRYSSTGSLYVTASKDGSLRIW 334
Query: 190 RLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFKL 249
+ + C P+ + AH + + F RY+ + D +K+W V +L
Sbjct: 335 DGI----SAECVRPI--IGAHASAEVTSAI---FTKDERYVLSCGKDSCIKLWEVGSGRL 385
Query: 250 EKTLVG--HQRWVWDCVFSVDGAYLI-TASSDTTARLWTMSTGEAIRVYTSHH 299
K VG H+++ VF+ +++ T ++ +W T E + S H
Sbjct: 386 VKQYVGAVHRQFRCQAVFNQTEEFVVSTDEQNSEVVVWDALTAENVARLPSGH 438
>Os01g0322800 WD40-like domain containing protein
Length = 517
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 129 PNQKELISGDQNGNIRVWDLAANSCSCELVPEVDT-------AVRSLTVMWDGSMVVAAN 181
P+ + L+S +G I VWD + +L + D AV S+ D M+ + +
Sbjct: 228 PDGQYLVSCSVDGIIEVWDYISGKLKKDLQYQADESFMMHDDAVLSVDFSRDSEMLASGS 287
Query: 182 NRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKI 241
G VWR+ G C L + A K + S F + ++S D T ++
Sbjct: 288 QDGKIKVWRIRTGQ----CLRRLERAHA------KGVTSVTFSRDGTQILSSSFDTTARV 337
Query: 242 WNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVY 295
+ K+ K GH +V +FS DG+ +ITASSD T ++W T + ++ +
Sbjct: 338 HGLKSGKMLKEFRGHNSYVNCAIFSTDGSRVITASSDCTVKVWDTKTTDCLQTF 391
>Os03g0151700 Similar to WD repeat protein (Fragment)
Length = 940
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 120/296 (40%), Gaps = 35/296 (11%)
Query: 8 LATASYDHSIKFWEAKSGRCYRTLQHTESHINRLEITPDKRF-LAAAGNPHIRLFDINSN 66
L ++ +++K W +G C RT+ + P R+ L + + + DINS
Sbjct: 408 LLMSTSHNAVKIWNPSTGDCLRTIDSDYGLCS--AFVPGNRYALVGTKSGTLEIIDINSG 465
Query: 67 SNHPVISYDSHTSNVMAVGFHCD-----GNWMY-SGSEDGTVRIWDLR------------ 108
S+ VI ++H ++ ++ + G W + +GS D V+ W+ +
Sbjct: 466 SSIEVI--EAHAGSIRSIVLIPNEDGTAGAWGFVTGSADHDVKFWEYQLMQKSDNDSKQL 523
Query: 109 TATCQREYESRAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSL 168
+ T + + V V + P + +G ++V+ + + + L V +
Sbjct: 524 SVTNVKTLKMNDDVLAVTISPTGNHIAVALLDGAVKVFTMDSLKFALTLYGH-KLPVLCM 582
Query: 169 TVMWDGSMVVAANNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNR 228
+ DG ++V + +W + G + F AH ++ +F
Sbjct: 583 DISSDGVLIVTGSADKNLKIWGMDFGDCHKSIF-------AHTDSVMDV----KFVSKTH 631
Query: 229 YLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLW 284
Y+ + D TVK W+ D F+L TL GH VW S G +++T S D + R W
Sbjct: 632 YMFSVGKDRTVKYWDADKFELLLTLEGHHAEVWCLAISSRGDFIVTGSHDRSIRRW 687
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 35/256 (13%)
Query: 67 SNHPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREYESRAAVNTVV 126
SN I H S++ ++ + + N + S S + V+IW+ T C R +S + +
Sbjct: 383 SNMYSIEMHGHRSDIRSLALNSEDNLLMSTSHNA-VKIWNPSTGDCLRTIDSDYGLCSAF 441
Query: 127 LHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTC 186
+ N+ L+ G ++G + + D+ + S S E++ ++RS+ V+ N GT
Sbjct: 442 VPGNRYALV-GTKSGTLEIIDINSGS-SIEVIEAHAGSIRSI--------VLIPNEDGTA 491
Query: 187 YVWRLLKGTQTITC----FEPLHK---------------LQAHDGYILKCLLSPEFCDPN 227
W + G+ ++ + K L+ +D +L +SP
Sbjct: 492 GAWGFVTGSADHDVKFWEYQLMQKSDNDSKQLSVTNVKTLKMNDD-VLAVTISP----TG 546
Query: 228 RYLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMS 287
++A A D VK++ +D K TL GH+ V S DG ++T S+D ++W M
Sbjct: 547 NHIAVALLDGAVKVFTMDSLKFALTLYGHKLPVLCMDISSDGVLIVTGSADKNLKIWGMD 606
Query: 288 TGEAIRVYTSHHKPVV 303
G+ + +H V+
Sbjct: 607 FGDCHKSIFAHTDSVM 622
>AK111547
Length = 389
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 114/290 (39%), Gaps = 45/290 (15%)
Query: 43 ITPDKRFLAAA---GNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSED 99
+TPD FL +A GNP +R N + + ++ H V + + SGS D
Sbjct: 71 VTPDGYFLISASKDGNPMLR----NGETGDWIGTFQGHKGAVWSCCLDTNALRAASGSAD 126
Query: 100 GTVRIWDLRTATCQREYESRAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVP 159
+ ++WD T +E + V + L++G +RV+D+ + +
Sbjct: 127 FSAKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRVYDMNRPDAAPRELD 186
Query: 160 EVDTAVRSLTVMW---DGSMVVAANNRGTCYVWRLLKG--TQTITCFEPLHKLQAHDGYI 214
+ VR TV W D +++ + ++ G +W + G QT+ P+
Sbjct: 187 KAPGNVR--TVAWLHSDQTILSSCSDMGGVRLWDVRTGKIVQTLETKAPV---------- 234
Query: 215 LKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVD------ 268
S E +R++ TA +VK W+ + F L K+ +D +V+
Sbjct: 235 ----TSAEVSQDSRFITTADGS-SVKFWDANHFGLVKS--------YDMPCTVESASLEP 281
Query: 269 --GAYLITASSDTTARLWTMSTGEAIRVYTSHHKPVVCCALHDGAESAPS 316
G+ I D ++ TGE I HH PV C G ES S
Sbjct: 282 KSGSKFIVGGEDMWVHVFDFFTGEEITCNKGHHGPVHCVRFAPGGESYAS 331
>Os06g0598900 Similar to Serine-threonine kinase receptor-associated protein
(UNR-interacting protein) (WD-40 repeat protein PT-WD)
(MAP activator with WD repeats)
Length = 342
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 45/287 (15%)
Query: 43 ITPDKRFLAAA---GNPHIRLFDINSNSNHPVISYDSHTSNVMAVGFHCDGNWMYSGSED 99
+TPD FL +A GNP +R N + + ++ H V + + SGS D
Sbjct: 27 VTPDGYFLISASKDGNPMLR----NGETGDWIGTFQGHKGAVWSCCLDTNALRAASGSAD 82
Query: 100 GTVRIWDLRTATCQREYESRAAVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVP 159
+ ++WD T +E + V + L++G +RV+D+ + +
Sbjct: 83 FSAKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRVYDMNRPDAAPRELD 142
Query: 160 EVDTAVRSLTVMW---DGSMVVAANNRGTCYVWRLLKG--TQTITCFEPLHKLQAHDGYI 214
+ VR TV W D +++ + ++ G +W + G QT+ P+
Sbjct: 143 KAPGNVR--TVAWLHSDQTILSSCSDMGGVRLWDVRTGKIVQTLETKAPV---------- 190
Query: 215 LKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFKLEKTLVGHQRWVWDCVFSVD------ 268
S E +R++ TA +VK W+ + F L K+ +D +V+
Sbjct: 191 ----TSAEVSQDSRFITTADGS-SVKFWDANHFGLVKS--------YDMPCTVESASLEP 237
Query: 269 --GAYLITASSDTTARLWTMSTGEAIRVYTSHHKPVVCCALHDGAES 313
G+ I D ++ TGE I HH PV C G ES
Sbjct: 238 KSGSKFIVGGEDMWVHVFDFFTGEEITCNKGHHGPVHCVRFAPGGES 284
>Os03g0711400 Similar to Coatomer alpha subunit
Length = 1218
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 42/268 (15%)
Query: 71 VISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREY-ESRAAVNTVVLHP 129
+ +++ ++ V + FH W+ + G +++WD R T + E V V H
Sbjct: 2 LTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHA 61
Query: 130 NQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVW 189
Q +SG + I+VW+ + C L +D +R++ + +V+A++ T +W
Sbjct: 62 TQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDY-IRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 190 RLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFK- 248
Q+ TC + L H+ Y++ P+ + +AS D TV++W++ +
Sbjct: 121 NW----QSRTC---VAVLTGHNHYVMCASFHPK----EDLVVSASLDQTVRVWDIGALRK 169
Query: 249 --------------------------LEKTLVGHQRWVWDCVFSVDGAYLITASSDTTAR 282
++ L GH R V F +++ + D +
Sbjct: 170 KTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVK 229
Query: 283 LWTMSTGEAIRVYT--SHHKPVVCCALH 308
LW M+ +A V T H V C H
Sbjct: 230 LWRMNDTKAWEVDTLRGHMNNVSCVMFH 257
>Os09g0127800 Similar to Coatomer alpha subunit
Length = 1218
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 42/268 (15%)
Query: 71 VISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQREY-ESRAAVNTVVLHP 129
+ +++ ++ V + FH W+ + G +++WD R T + E V V H
Sbjct: 2 LTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHA 61
Query: 130 NQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAANNRGTCYVW 189
Q +SG + I+VW+ + C L +D +R++ + +V+A++ T +W
Sbjct: 62 TQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDY-IRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 190 RLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVKIWNVDGFK- 248
Q+ TC + L H+ Y++ P+ + +AS D TV++W++ +
Sbjct: 121 NW----QSRTC---VAVLTGHNHYVMCASFHPK----EDLVVSASLDQTVRVWDIGALRK 169
Query: 249 --------------------------LEKTLVGHQRWVWDCVFSVDGAYLITASSDTTAR 282
++ L GH R V F +++ + D +
Sbjct: 170 KTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVK 229
Query: 283 LWTMSTGEAIRVYT--SHHKPVVCCALH 308
LW M+ +A V T H V C H
Sbjct: 230 LWRMNDTKAWEVDTLRGHMNNVSCVMFH 257
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.132 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,486,883
Number of extensions: 461680
Number of successful extensions: 2676
Number of sequences better than 1.0e-10: 33
Number of HSP's gapped: 2506
Number of HSP's successfully gapped: 47
Length of query: 316
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 215
Effective length of database: 11,762,187
Effective search space: 2528870205
Effective search space used: 2528870205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)