Os07g0405100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to F-box-like/WD-repeat protein ebi.
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Os07g0405100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to F-box-like/WD-repeat protein ebi.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.91 | 0.318 | 11.4 | -0.532 | 0.165 | 0.517 | 0.055 | -1.42 | -0.252 | 16.9 | 21 | 280 | -- | -- |
| 46.72 | 0.318 | 11.3 | -0.263 | 0.211 | 0.442 | -0.242 | -- | -0.183 | 16.2 | 19.37 | 466 | -- | -- |
| 45.92 | 0.316 | 11.4 | -0.527 | 0.169 | 0.512 | -- | -1.37 | -0.251 | 16.6 | 20.91 | 307 | -- | -- |
| 46.64 | 0.318 | 11.3 | -0.296 | 0.265 | 0.519 | -- | -- | -0.178 | 16 | 14.71 | 605 | -- | -- |
| 46.86 | 0.319 | 11.4 | -0.588 | -- | 0.661 | -- | -1.56 | -0.282 | -- | 21.33 | 271 | -- | -- |
| 50.06 | 0.332 | 11.3 | -0.165 | 0.351 | -- | -0.196 | -- | -0.101 | 16.8 | -- | -- | -- | -- |
| 50.16 | 0.332 | 11.3 | -0.165 | 0.35 | -- | -- | -- | -0.102 | 16.9 | -- | -- | -- | -- |
| 48.35 | 0.324 | 11.3 | -0.329 | -- | 0.728 | -- | -- | -0.207 | -- | 14.79 | 305 | -- | -- |
| 48.64 | 0.325 | 11.3 | -- | 0.271 | 0.413 | -- | -- | -0.134 | 16 | 14.47 | 551 | -- | -- |
| 56.63 | 0.352 | 11.3 | -0.178 | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
| 50.88 | 0.334 | 11.3 | -- | 0.353 | -- | -- | -- | -0.0833 | 16.9 | -- | -- | -- | -- |
| 50.79 | 0.332 | 11.3 | -- | -- | 0.494 | -- | -- | -0.157 | -- | 21.09 | 306 | -- | -- |
| 57.47 | 0.354 | 11.3 | -- | -- | -- | -- | -- | -0.091 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 11 | 44.14 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 16 | 44.40 | temperature | 25 | 10 | > th | dose independent | rect. | 12 | 23 |
| 24 | 44.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 34 | 44.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 36 | 44.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 20 |
| 45 | 44.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 122 | 45.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 154 | 45.36 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 163 | 45.39 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 164 | 45.39 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 174 | 45.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 204 | 45.46 | wind | 3 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 222 | 45.49 | wind | 3 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 296 | 45.61 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 337 | 45.67 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 356 | 45.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 361 | 45.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 389 | 45.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 7 |
| 414 | 45.74 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 415 | 45.74 | wind | 9 | 14400 | < th | dose dependent | rect. | 9 | 6 |
| 426 | 45.75 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 509 | 45.82 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 543 | 45.84 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 545 | 45.84 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 562 | 45.85 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 17 |
| 563 | 45.85 | radiation | 1 | 30 | > th | dose independent | rect. | 12 | 23 |
| 582 | 45.86 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 597 | 45.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 613 | 45.88 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 627 | 45.89 | wind | 5 | 14400 | < th | dose independent | sin | 23 | NA |
| 628 | 45.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 656 | 45.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 11 |
| 687 | 45.92 | wind | 5 | 14400 | > th | dose independent | sin | 23 | NA |
| 690 | 45.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 706 | 45.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 726 | 45.94 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 729 | 45.94 | humidity | 50 | 720 | > th | dose independent | rect. | 15 | 6 |
| 748 | 45.95 | humidity | 50 | 720 | > th | dose independent | rect. | 15 | 21 |
| 764 | 45.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 770 | 45.96 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 806 | 45.98 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 807 | 45.98 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 816 | 45.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 878 | 46.00 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 887 | 46.00 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 899 | 46.01 | radiation | 40 | 43200 | > th | dose independent | sin | 18 | NA |
| 905 | 46.01 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 912 | 46.01 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 948 | 46.01 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 959 | 46.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 967 | 46.02 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |