Os07g0572000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os07g0572000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.55 | 0.292 | 11.6 | -0.539 | 1.17 | -1.09 | 1.08 | -0.83 | -0.199 | 17.3 | 20.6 | 87 | -- | -- |
| 38.91 | 0.291 | 11.6 | -0.557 | 1.17 | -0.807 | 1.16 | -- | -0.202 | 17.2 | 20.79 | 82 | -- | -- |
| 41.33 | 0.299 | 11.6 | -0.525 | 1.16 | -1.24 | -- | -1.32 | -0.187 | 17.2 | 20.6 | 93 | -- | -- |
| 42.26 | 0.303 | 11.6 | -0.563 | 1.18 | -0.797 | -- | -- | -0.199 | 17.2 | 20.8 | 66 | -- | -- |
| 86.42 | 0.433 | 11.6 | -0.606 | -- | -1.44 | -- | -1.13 | -0.372 | -- | 30.86 | 266 | -- | -- |
| 43.76 | 0.31 | 11.6 | -0.423 | 1.21 | -- | 1.14 | -- | -0.142 | 17.1 | -- | -- | -- | -- |
| 47.02 | 0.321 | 11.6 | -0.422 | 1.22 | -- | -- | -- | -0.136 | 17 | -- | -- | -- | -- |
| 87.93 | 0.437 | 11.6 | -0.785 | -- | -1.54 | -- | -- | -0.396 | -- | 32.94 | 253 | -- | -- |
| 49.67 | 0.33 | 11.6 | -- | 1.2 | -0.491 | -- | -- | -0.119 | 17.1 | 20.8 | 66 | -- | -- |
| 124.54 | 0.521 | 11.6 | -0.466 | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
| 51.71 | 0.336 | 11.6 | -- | 1.22 | -- | -- | -- | -0.0894 | 17 | -- | -- | -- | -- |
| 103.14 | 0.473 | 11.6 | -- | -- | -1.3 | -- | -- | -0.261 | -- | 43.65 | 250 | -- | -- |
| 130.26 | 0.533 | 11.6 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 3 | 36.93 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 17 |
| 5 | 37.04 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 19 |
| 7 | 37.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 7 |
| 70 | 38.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 91 | 38.36 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 20 |
| 95 | 38.42 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 7 |
| 106 | 38.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 7 |
| 107 | 38.52 | radiation | 40.0 | 30 | < th | dose independent | rect. | 17 | 19 |
| 118 | 38.56 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 11 | 21 |
| 123 | 38.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 23 |
| 124 | 38.60 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 139 | 38.65 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 142 | 38.67 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 16 | 20 |
| 146 | 38.68 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 154 | 38.69 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 160 | 38.69 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 167 | 38.70 | temperature | 20.0 | 90 | < th | dose dependent | no | NA | NA |
| 183 | 38.72 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 195 | 38.75 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 200 | 38.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 210 | 38.78 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 18 |
| 230 | 38.81 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 233 | 38.82 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 22 |
| 266 | 38.87 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 347 | 38.96 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 372 | 38.99 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 391 | 39.01 | temperature | 20.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 424 | 39.06 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 11 | 6 |
| 431 | 39.07 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 434 | 39.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 440 | 39.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 462 | 39.13 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 471 | 39.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 9 |
| 480 | 39.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 505 | 39.17 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 18 |
| 513 | 39.18 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 22 |
| 516 | 39.18 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 9 | 6 |
| 523 | 39.19 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 4 |
| 558 | 39.23 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 560 | 39.23 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 591 | 39.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 20 |
| 593 | 39.26 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 23 |
| 596 | 39.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 605 | 39.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 621 | 39.28 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 625 | 39.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 24 | 17 |
| 631 | 39.29 | temperature | 20.0 | 90 | < th | dose independent | sin | 10 | NA |
| 634 | 39.29 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 635 | 39.29 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 18 | 17 |
| 644 | 39.30 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 657 | 39.31 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 660 | 39.31 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 666 | 39.32 | temperature | 20.0 | 90 | > th | dose independent | no | NA | NA |
| 668 | 39.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 17 |
| 691 | 39.34 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 710 | 39.36 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 7 |
| 735 | 39.38 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 773 | 39.41 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 11 | 6 |
| 787 | 39.42 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 809 | 39.43 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 17 | 12 |
| 819 | 39.43 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 823 | 39.44 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 845 | 39.45 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 880 | 39.47 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 896 | 39.48 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 898 | 39.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 924 | 39.48 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 944 | 39.50 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 6 |
| 997 | 39.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 17 |