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Os10g0494800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Katanin p80 WD40-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0161) R2 : 0.0836
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.218 (0.0338) R2dN8 : 0.108 R2N8 : 0.0836
σ : 0.303
deviance : 42.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.7 0.219 11.2 -0.381 0.55 -0.328 0.0763 -0.851 0.131 4.45 25.3 4 -- --
22.64 0.222 11.2 -0.506 0.525 -0.364 -0.194 -- 0.121 4.53 21.6 41 -- --
21.69 0.219 11.2 -0.384 0.549 -0.324 -- -0.822 0.129 4.44 25.3 4 -- --
22.72 0.222 11.2 -0.511 0.525 -0.364 -- -- 0.124 4.59 21.6 41 -- --
36.47 0.283 11.2 -0.36 -- -0.13 -- -0.63 0.176 -- 24.1 8 -- --
23.88 0.229 11.2 -0.447 0.502 -- -0.147 -- 0.157 4.75 -- -- -- --
23.93 0.229 11.2 -0.446 0.502 -- -- -- 0.158 4.81 -- -- -- --
34.68 0.274 11.2 -0.343 -- 0.415 -- -- 0.226 -- 35.69 249 -- --
28.92 0.25 11.2 -- 0.493 -0.261 -- -- 0.204 4.84 16.5 155 -- --
37.24 0.285 11.2 -0.427 -- -- -- -- 0.171 -- -- -- -- --
29.17 0.253 11.2 -- 0.494 -- -- -- 0.208 4.84 -- -- -- --
37.57 0.285 11.2 -- -- 0.53 -- -- 0.277 -- 48.7 248 -- --
42.06 0.303 11.2 -- -- -- -- -- 0.218 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.90 temperature 20.0 90 > th dose independent rect. 4 19
2 20.95 precipitation 0.1 1440 > th dose independent rect. 5 1
3 20.96 precipitation 0.1 1440 < th dose independent rect. 5 1
4 20.96 precipitation 0.1 1440 < th dose dependent rect. 5 1
5 20.97 precipitation 0.1 1440 > th dose dependent rect. 5 1
6 21.08 temperature 20.0 10 > th dose independent rect. 5 18
10 21.19 temperature 20.0 270 > th dose independent rect. 3 6
12 21.19 precipitation 0.1 1440 > th dose dependent rect. 5 3
16 21.24 precipitation 0.1 720 > th dose dependent rect. 4 12
21 21.31 precipitation 0.1 720 > th dose independent rect. 5 10
22 21.31 temperature 20.0 270 > th dose dependent rect. 5 1
24 21.32 precipitation 0.1 720 < th dose independent sin 0 NA
26 21.32 precipitation 0.1 720 < th dose dependent sin 0 NA
29 21.33 temperature 15.0 270 > th dose independent rect. 17 14
31 21.34 precipitation 0.1 1440 < th dose independent rect. 5 3
33 21.34 precipitation 0.1 1440 < th dose dependent rect. 5 3
34 21.35 temperature 20.0 270 > th dose independent rect. 5 1
37 21.36 humidity 90.0 4320 > th dose dependent rect. 8 1
40 21.37 temperature 25.0 10 < th dose dependent rect. 13 18
43 21.39 temperature 20.0 270 > th dose dependent rect. 2 6
45 21.40 temperature 20.0 10 > th dose dependent sin 7 NA
52 21.40 temperature 25.0 10 < th dose dependent rect. 13 21
59 21.42 temperature 20.0 270 > th dose dependent rect. 3 4
63 21.43 precipitation 0.1 14400 > th dose dependent rect. 19 1
90 21.48 temperature 30.0 10 < th dose dependent sin 8 NA
91 21.48 humidity 80.0 720 > th dose dependent sin 1 NA
92 21.48 precipitation 0.1 14400 > th dose dependent rect. 17 1
93 21.48 humidity 80.0 720 > th dose dependent rect. 5 12
94 21.48 precipitation 0.1 720 > th dose dependent rect. 24 17
99 21.49 precipitation 0.1 720 > th dose independent rect. 24 17
104 21.50 temperature 30.0 270 < th dose dependent rect. 21 7
115 21.53 precipitation 0.1 14400 > th dose independent rect. 19 1
116 21.53 precipitation 0.1 14400 < th dose independent rect. 19 1
118 21.53 humidity 50.0 43200 > th dose independent rect. 24 5
124 21.53 precipitation 0.1 14400 < th dose dependent rect. 19 1
134 21.54 temperature 25.0 10 < th dose dependent rect. 23 19
189 21.61 humidity 90.0 720 < th dose independent rect. 9 6
190 21.61 wind 3.0 14400 < th dose independent rect. 22 9
194 21.61 wind 3.0 14400 < th dose dependent rect. 21 10
195 21.61 temperature 20.0 720 > th dose dependent rect. 20 10
205 21.62 precipitation 0.1 14400 > th dose independent rect. 17 1
220 21.63 temperature 30.0 270 < th dose dependent rect. 22 5
242 21.64 wind 9.0 270 < th dose dependent rect. 2 9
256 21.65 temperature 15.0 270 > th dose independent rect. 1 22
269 21.66 wind 3.0 14400 < th dose independent rect. 22 6
293 21.67 temperature 20.0 30 > th dose independent sin 6 NA
300 21.67 wind 3.0 14400 < th dose dependent rect. 21 7
310 21.68 wind 3.0 14400 < th dose independent rect. 22 4
314 21.68 temperature 20.0 90 > th dose independent rect. 4 11
328 21.69 humidity 80.0 14400 > th dose independent rect. 13 1
331 21.69 wind 3.0 14400 > th dose independent rect. 22 9
352 21.70 precipitation 0.1 14400 < th dose independent rect. 17 1
358 21.70 humidity 80.0 14400 > th dose dependent rect. 13 1
359 21.70 precipitation 0.1 14400 < th dose dependent rect. 17 1
360 21.70 wind 3.0 14400 < th dose dependent rect. 21 5
375 21.71 wind 3.0 14400 < th dose independent rect. 5 2
384 21.71 precipitation 0.1 4320 > th dose dependent rect. 2 6
400 21.72 precipitation 0.1 4320 < th dose independent rect. 2 6
401 21.72 temperature 20.0 10 > th dose independent rect. 5 7
402 21.72 precipitation 0.1 4320 > th dose independent rect. 2 15
405 21.72 wind 3.0 14400 < th dose dependent sin 9 NA
407 21.72 wind 3.0 14400 < th dose dependent rect. 5 4
408 21.72 precipitation 0.1 4320 > th dose dependent rect. 2 4
411 21.72 precipitation 0.1 4320 < th dose dependent rect. 2 6
418 21.72 temperature 10.0 720 > th dose dependent rect. 18 13
431 21.72 temperature 25.0 10 < th dose dependent rect. 1 23
437 21.73 precipitation 0.1 4320 > th dose independent rect. 2 6
475 21.74 temperature 15.0 1440 > th dose independent rect. 5 8
479 21.74 precipitation 0.1 4320 < th dose independent rect. 2 15
500 21.74 precipitation 0.1 4320 < th dose dependent rect. 2 15
502 21.74 precipitation 0.1 4320 > th dose dependent rect. 1 16
515 21.75 wind 3.0 14400 > th dose independent rect. 5 4
516 21.75 precipitation 0.1 4320 < th dose independent rect. 2 4
519 21.75 wind 1.0 14400 > th dose independent rect. 19 16
528 21.75 temperature 25.0 10 < th dose dependent no NA NA
529 21.75 wind 3.0 14400 < th dose dependent rect. 6 1
531 21.75 precipitation 0.1 4320 < th dose dependent rect. 2 4
553 21.75 temperature 25.0 10 < th dose dependent rect. 17 23
556 21.76 wind 3.0 14400 > th dose independent rect. 5 2
570 21.76 wind 1.0 14400 < th dose independent rect. 19 16
589 21.76 temperature 25.0 10 < th dose dependent rect. 15 23
591 21.77 humidity 70.0 4320 < th dose independent rect. 15 1
596 21.77 temperature 20.0 10 > th dose independent rect. 5 10
638 21.78 temperature 20.0 1440 > th dose dependent rect. 4 1
672 21.79 wind 3.0 14400 > th dose independent rect. 22 6
676 21.79 humidity 80.0 720 > th dose independent rect. 3 14
703 21.79 humidity 70.0 720 > th dose dependent rect. 23 19
705 21.79 humidity 70.0 720 > th dose dependent rect. 21 21
711 21.80 humidity 90.0 720 < th dose independent sin 0 NA
712 21.80 temperature 15.0 720 > th dose independent rect. 9 6
715 21.80 temperature 25.0 720 < th dose independent rect. 17 8
719 21.80 humidity 80.0 720 > th dose independent rect. 4 12
729 21.80 wind 3.0 14400 < th dose dependent rect. 23 3
787 21.81 precipitation 0.1 4320 > th dose dependent rect. 2 12
803 21.81 temperature 25.0 10 < th dose dependent rect. 3 23
814 21.82 temperature 15.0 270 > th dose independent rect. 11 11
821 21.82 atmosphere 1010.0 270 < th dose independent rect. 17 14
829 21.82 precipitation 0.1 720 > th dose dependent sin 2 NA
833 21.82 wind 3.0 14400 < th dose dependent rect. 1 8
852 21.83 humidity 70.0 720 < th dose independent rect. 15 1
854 21.83 wind 3.0 14400 > th dose independent rect. 22 4
857 21.83 temperature 25.0 720 < th dose independent rect. 18 5
861 21.83 wind 1.0 14400 > th dose independent rect. 4 8
866 21.83 precipitation 0.1 270 < th dose independent rect. 7 10
869 21.83 humidity 80.0 720 < th dose independent rect. 5 12
895 21.83 precipitation 0.1 270 < th dose dependent rect. 7 10
929 21.84 wind 5.0 270 < th dose independent rect. 2 9
934 21.84 radiation 1.0 270 > th dose independent rect. 7 11
955 21.84 temperature 10.0 720 > th dose dependent rect. 20 6
964 21.84 temperature 30.0 10 < th dose dependent rect. 22 8
965 21.84 temperature 25.0 90 < th dose dependent rect. 23 8
998 21.85 humidity 80.0 720 > th dose independent sin 2 NA
1000 21.85 precipitation 0.1 720 > th dose independent sin 2 NA