Os03g0685600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
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Os03g0685600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.53 | 0.32 | 8.77 | -0.102 | 0.174 | 0.585 | -0.393 | 0.717 | -0.391 | 8.66 | 1.917 | 70 | -- | -- |
| 47.33 | 0.32 | 8.76 | -0.0907 | 0.169 | 0.573 | -0.0873 | -- | -0.389 | 8.48 | -1.766 | 69 | -- | -- |
| 46.88 | 0.319 | 8.76 | -0.124 | 0.213 | 0.542 | -- | 0.511 | -0.397 | 9.28 | 4.403 | 69 | -- | -- |
| 47.28 | 0.32 | 8.76 | -0.0956 | 0.196 | 0.526 | -- | -- | -0.387 | 9.43 | 2.52 | 67 | -- | -- |
| 48.2 | 0.323 | 8.77 | -0.0934 | -- | 0.673 | -- | 0.497 | -0.387 | -- | 0.06055 | 67 | -- | -- |
| 50.69 | 0.334 | 8.75 | -0.101 | 0.44 | -- | 0.115 | -- | -0.367 | 11.4 | -- | -- | -- | -- |
| 50.75 | 0.334 | 8.75 | -0.0963 | 0.439 | -- | -- | -- | -0.367 | 11.3 | -- | -- | -- | -- |
| 48.65 | 0.325 | 8.77 | -0.094 | -- | 0.67 | -- | -- | -0.39 | -- | -1.02 | 67 | -- | -- |
| 47.52 | 0.321 | 8.76 | -- | 0.192 | 0.526 | -- | -- | -0.377 | 9.41 | 2.185 | 69 | -- | -- |
| 62.83 | 0.37 | 8.76 | -0.107 | -- | -- | -- | -- | -0.371 | -- | -- | -- | -- | -- |
| 50.99 | 0.334 | 8.75 | -- | 0.44 | -- | -- | -- | -0.356 | 11.3 | -- | -- | -- | -- |
| 48.75 | 0.325 | 8.77 | -- | -- | 0.678 | -- | -- | -0.375 | -- | -17.35 | 51 | -- | -- |
| 63.13 | 0.371 | 8.76 | -- | -- | -- | -- | -- | -0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.42 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 2 | 43.93 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 5 | 44.17 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 7 | 44.24 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 13 | 44.44 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 16 | 44.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 23 | 44.65 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 10 |
| 26 | 44.67 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 29 | 44.73 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 31 | 44.73 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 15 |
| 35 | 44.78 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 51 | 44.83 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 60 | 44.88 | humidity | 90.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 61 | 44.88 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 63 | 44.89 | radiation | 1.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 71 | 44.93 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 72 | 44.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 73 | 44.94 | humidity | 60.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 74 | 44.94 | radiation | 20.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 77 | 44.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 81 | 44.95 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 82 | 44.95 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 84 | 44.95 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 85 | 44.95 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 90 | 44.95 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 91 | 44.95 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 94 | 44.95 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 116 | 44.98 | radiation | 40.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 118 | 44.99 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 135 | 45.04 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 137 | 45.05 | humidity | 60.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 147 | 45.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 149 | 45.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 151 | 45.09 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 156 | 45.10 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 158 | 45.10 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 169 | 45.13 | radiation | 1.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 177 | 45.15 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 182 | 45.16 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 199 | 45.20 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 9 |
| 223 | 45.23 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 229 | 45.24 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 241 | 45.27 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 8 |
| 242 | 45.27 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 250 | 45.28 | radiation | 1.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 279 | 45.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 280 | 45.32 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 283 | 45.33 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 301 | 45.35 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 303 | 45.36 | radiation | 10.0 | 270 | > th | dose independent | sin | 7 | NA |
| 313 | 45.37 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 328 | 45.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 329 | 45.39 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 332 | 45.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 335 | 45.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 345 | 45.42 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 357 | 45.42 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 376 | 45.45 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 383 | 45.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 397 | 45.46 | wind | 3.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 445 | 45.49 | wind | 7.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 448 | 45.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 452 | 45.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 453 | 45.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 454 | 45.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 463 | 45.51 | wind | 5.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 470 | 45.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 17 |
| 482 | 45.53 | radiation | 40.0 | 90 | < th | dose independent | rect. | 23 | 20 |
| 494 | 45.54 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 6 | 8 |
| 503 | 45.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 507 | 45.55 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 514 | 45.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 535 | 45.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 620 | 45.64 | radiation | 40.0 | 90 | < th | dose independent | sin | 7 | NA |
| 657 | 45.66 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 662 | 45.67 | humidity | 80.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 666 | 45.67 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 674 | 45.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 713 | 45.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 722 | 45.72 | wind | 7.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 726 | 45.72 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 740 | 45.73 | humidity | 80.0 | 90 | > th | dose independent | sin | 5 | NA |
| 741 | 45.73 | wind | 7.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 761 | 45.73 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 773 | 45.74 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 788 | 45.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 791 | 45.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 813 | 45.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 818 | 45.76 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 841 | 45.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 844 | 45.77 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 846 | 45.77 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 864 | 45.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 866 | 45.78 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 873 | 45.79 | radiation | 40.0 | 90 | > th | dose independent | sin | 8 | NA |
| 894 | 45.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 903 | 45.80 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 904 | 45.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 906 | 45.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 943 | 45.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 960 | 45.82 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 15 |
| 962 | 45.82 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 18 |
| 989 | 45.84 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 990 | 45.84 | radiation | 20.0 | 90 | > th | dose independent | rect. | 8 | 6 |