BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0761100 Os02g0761100|AK070404
(403 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0761100 Similar to Cyclophilin-40 (Expressed protein) 652 0.0
Os06g0216800 Similar to Cyclophilin-40 (Expressed protein) 563 e-161
Os09g0571400 Cyclophilin 1 189 3e-48
Os02g0121300 Cyclophilin 2 186 3e-47
Os09g0537600 Similar to Cyclophilin-like protein (Single do... 182 5e-46
Os05g0103200 Peptidyl-prolyl cis-trans isomerase, cyclophil... 179 4e-45
Os06g0708500 Similar to Cyclophilin 179 4e-45
AK062540 174 9e-44
Os10g0154700 Similar to Cyclophilin Dicyp-2 169 4e-42
Os03g0811600 Similar to Peptidyl prolyl isomerase H 166 3e-41
Os08g0557500 Similar to Yarrowia lipolytica chromosome C of... 122 5e-28
Os06g0130500 Similar to Cyclophilin-like protein PPIL3b 119 6e-27
Os08g0559400 Similar to Cyclophilin-like protein 114 1e-25
Os01g0582400 Similar to Multidomain cyclophilin type peptid... 80 4e-15
Os06g0670500 Similar to Multidomain cyclophilin type peptid... 75 8e-14
Os06g0670400 75 1e-13
Os02g0111200 74 2e-13
>Os02g0761100 Similar to Cyclophilin-40 (Expressed protein)
Length = 403
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/373 (86%), Positives = 321/373 (86%)
Query: 31 RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI 90
RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI
Sbjct: 31 RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI 90
Query: 91 HRIVKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF 150
HRIVKGFMVQ ESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF
Sbjct: 91 HRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF 150
Query: 151 ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPEGASDGV 210
ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPEGASDGV
Sbjct: 151 ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPEGASDGV 210
Query: 211 VNFFSDGDMYPDWPNDLEEKPAEISWWMTAVDSAKSFGNEXXXXXXXXXXXXXXXXAMRY 270
VNFFSDGDMYPDWPNDLEEKPAEISWWMTAVDSAKSFGNE AMRY
Sbjct: 211 VNFFSDGDMYPDWPNDLEEKPAEISWWMTAVDSAKSFGNEYFKKKDYKTALKKYRKAMRY 270
Query: 271 LDLCWEKEEIDEEKSSALRKTKSIILTNSSACXXXXXXXXXXXXXXXXXXREGEGNPKAF 330
LDLCWEKEEIDEEKSSALRKTKSIILTNSSAC REGEGNPKAF
Sbjct: 271 LDLCWEKEEIDEEKSSALRKTKSIILTNSSACKLKLGDLKGALLDADFALREGEGNPKAF 330
Query: 331 FRQGQARIALNDIDAAVESFKHALQLEPNDGGIKRELXXXXXXIADRRDQERKAFSRMFQ 390
FRQGQARIALNDIDAAVESFKHALQLEPNDGGIKREL IADRRDQERKAFSRMFQ
Sbjct: 331 FRQGQARIALNDIDAAVESFKHALQLEPNDGGIKRELAAAKKKIADRRDQERKAFSRMFQ 390
Query: 391 PSGGSEKIDEENN 403
PSGGSEKIDEENN
Sbjct: 391 PSGGSEKIDEENN 403
>Os06g0216800 Similar to Cyclophilin-40 (Expressed protein)
Length = 396
Score = 563 bits (1452), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/372 (72%), Positives = 299/372 (80%)
Query: 31 RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI 90
+NPRC++DVSIGG++EGRIV+ELYASV PRTAENFRALCTGEKGV A TG LHYKGSC
Sbjct: 24 KNPRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGKHLHYKGSCF 83
Query: 91 HRIVKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF 150
HR++KGFMVQ ESIYGL FEDENFVLKHERKGMLSMAN+GP+TNGSQFF
Sbjct: 84 HRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFF 143
Query: 151 ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPEGASDGV 210
ITTTRTPHLDGKHVVFGRVIKGMGVVRS+EH VGE+DRP +D+ IVDCGELPEGA DGV
Sbjct: 144 ITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVDCGELPEGADDGV 203
Query: 211 VNFFSDGDMYPDWPNDLEEKPAEISWWMTAVDSAKSFGNEXXXXXXXXXXXXXXXXAMRY 270
VNFF+DGD YPDWPNDL+EKP E+SWWM AV+SAK+FGN A+RY
Sbjct: 204 VNFFNDGDTYPDWPNDLDEKPMEVSWWMDAVESAKAFGNNNFKKQDYKAALRKYRKALRY 263
Query: 271 LDLCWEKEEIDEEKSSALRKTKSIILTNSSACXXXXXXXXXXXXXXXXXXREGEGNPKAF 330
LD+CWEKE+IDEEKSSALRKTKSIILTNSSAC RE EGN KAF
Sbjct: 264 LDVCWEKEDIDEEKSSALRKTKSIILTNSSACKLKLGDLKGALLDADFALRESEGNAKAF 323
Query: 331 FRQGQARIALNDIDAAVESFKHALQLEPNDGGIKRELXXXXXXIADRRDQERKAFSRMFQ 390
FRQGQA IALNDIDAAVESFKHAL+LEP+DGGIKREL IADRR+QERKAF+RMFQ
Sbjct: 324 FRQGQAHIALNDIDAAVESFKHALELEPSDGGIKRELAAAKKKIADRRNQERKAFARMFQ 383
Query: 391 PSGGSEKIDEEN 402
PSG S+K +EE+
Sbjct: 384 PSGKSDKDNEES 395
>Os09g0571400 Cyclophilin 1
Length = 179
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 116/174 (66%), Gaps = 2/174 (1%)
Query: 31 RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI 90
+NP+ + D+ IG GR+V+EL+A P+TAENFR LCTGEKG+ A+G PLHYKGS
Sbjct: 4 KNPKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGL-GASGKPLHYKGSAF 62
Query: 91 HRIVKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF 150
HRI+ FM Q ESIYG F DENF L+H G+LSMANAGP+TNGSQFF
Sbjct: 63 HRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFF 122
Query: 151 ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPE 204
I TTRT LDGKHVVFG+V+ G VV ME V G S ++I DCG+L +
Sbjct: 123 ICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSG-SGGTAERVLIEDCGQLAD 175
>Os02g0121300 Cyclophilin 2
Length = 172
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 117/173 (67%), Gaps = 6/173 (3%)
Query: 32 NPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIH 91
N R + D+++GG GRIV+ELYA PRTAENFRALCTGEKGV +G PLHYKGS H
Sbjct: 3 NTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGV-GKSGKPLHYKGSTFH 61
Query: 92 RIVKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFI 151
R++ FM Q ESIYG F DE F KH+ G+LSMANAGP+TNGSQFFI
Sbjct: 62 RVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFI 121
Query: 152 TTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSV--GESDRPITDIVIVDCGEL 202
T LDGKHVVFGRV++GM VV+++E V G + +P +VI DCG+L
Sbjct: 122 CTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKP---VVIADCGQL 171
>Os09g0537600 Similar to Cyclophilin-like protein (Single domain cyclophilin type
peptidyl- prolyl cis-trans isomerase)
Length = 215
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
Query: 34 RCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRI 93
R YLDV I G GRIV+ LY V P+T NFRALCTGE+G+ G LHYKGS HRI
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGI-GHKGKSLHYKGSRFHRI 97
Query: 94 VKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITT 153
+ GFM+Q ESIYG F DENF++KH G+++MAN+GPD+NGSQF+ITT
Sbjct: 98 IPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITT 157
Query: 154 TRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPE 204
+T LDG+HVVFGRVI+GM V ++E + + +P +VI D GE+P+
Sbjct: 158 IKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPK 208
>Os05g0103200 Peptidyl-prolyl cis-trans isomerase, cyclophilin type domain
containing protein
Length = 250
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 112/173 (64%), Gaps = 11/173 (6%)
Query: 34 RCYLDVSIG---GDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI 90
+ Y D+SIG G GR+V+ LY P+TAENFRALCTGEKG YKGS
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKG--------FGYKGSSF 135
Query: 91 HRIVKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF 150
HR++K FM+Q +SIYG F+DENF L H G++SMANAGP+TNGSQFF
Sbjct: 136 HRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFF 195
Query: 151 ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELP 203
I T +TP LDG+HVVFG+VI+GM +V+ +E DRP +VI +CGELP
Sbjct: 196 ICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISECGELP 248
>Os06g0708500 Similar to Cyclophilin
Length = 249
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 110/170 (64%), Gaps = 2/170 (1%)
Query: 34 RCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRI 93
+ Y DV I G GR+V+ L+ P+TAENFRALCTGEKG + +G LH+KGS HRI
Sbjct: 81 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG-TGKSGKALHFKGSAFHRI 139
Query: 94 VKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITT 153
+ FM+Q ESIYG F DENF +KH G+LSMANAG DTNGSQFFITT
Sbjct: 140 IPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITT 199
Query: 154 TRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELP 203
T LDGKHVVFG+V+ GM VV +E +S P + +VI D GELP
Sbjct: 200 VTTSWLDGKHVVFGKVLSGMDVVYKIE-AEGQQSGSPKSKVVIADSGELP 248
>AK062540
Length = 206
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 34 RCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRI 93
+ + D++IGG GR+V+ LY P+T ENFRALCTGEKG+ PLHYKGS HRI
Sbjct: 31 QVFFDITIGGKDAGRVVMGLYGKTVPKTVENFRALCTGEKGMGKKG-KPLHYKGSTFHRI 89
Query: 94 VKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITT 153
+ FM+Q ESIYG FEDENF LKH +G+LSMANAG +TNGSQFFI T
Sbjct: 90 IPNFMIQGGDFTDGNGMGGESIYGEKFEDENFKLKHTGEGVLSMANAGANTNGSQFFICT 149
Query: 154 TRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPE 204
+T LDG+HVVFGRVI GM +++++E V G P +V+ D GELPE
Sbjct: 150 VKTSWLDGRHVVFGRVISGMDIIKAVEAVGSG-GGTPSEQVVVKDSGELPE 199
>Os10g0154700 Similar to Cyclophilin Dicyp-2
Length = 181
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 110/174 (63%), Gaps = 5/174 (2%)
Query: 32 NPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIH 91
NPR +LD++IGG+ GR+V+EL A P TAENFR LCTGE+ + LHYKGS H
Sbjct: 10 NPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKS-RLHYKGSAFH 68
Query: 92 RIVKGFMVQXXXXXXXXXXXXESIY---GLNFEDENFVLKHERKGMLSMANAGPDTNGSQ 148
R+V GFM Q ES +F DE F +KH+ G++SMANAGP+TNGSQ
Sbjct: 69 RVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQ 128
Query: 149 FFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGEL 202
FFIT + P LDG+HV FGRV+ GMG VR+++ S + + +VI DCG L
Sbjct: 129 FFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGT-WSGKTVKPVVITDCGVL 181
>Os03g0811600 Similar to Peptidyl prolyl isomerase H
Length = 204
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
Query: 31 RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCI 90
+NP + DV+IG GRI +EL+A + P+TAENFR CTGE +G+P YKG
Sbjct: 35 KNPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEH---RKSGLPQGYKGCQF 91
Query: 91 HRIVKGFMVQXXXXXXXXXXXXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFF 150
HR++K FM+Q SIYG F+DENF+ KH G+LSMAN+G ++NGSQFF
Sbjct: 92 HRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMANSGVNSNGSQFF 151
Query: 151 ITTTRTPHLDGKHVVFGRVI-KGMGVVRSMEHVSVGESDRPITDIVIVDCGEL 202
IT + LD KHVVFGRV+ GM VR +E+V+ G ++RP VI +CGE+
Sbjct: 152 ITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGEM 204
>Os08g0557500 Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of
Yarrowia lipolytica
Length = 154
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 13/154 (8%)
Query: 47 GRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRIVKGFMVQXXXXXX 106
G I + LY P+T ENF C +Y HR++KGFM+Q
Sbjct: 8 GDIHLRLYPEECPKTVENFTTHCRNG-----------YYDNLIFHRVIKGFMIQTGDPLG 56
Query: 107 XXXXXXESIYGLNFEDE-NFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVV 165
+SI+G FEDE + L+H+R LSMANAGP+TNGSQFFITT TP LD KH V
Sbjct: 57 DGTGG-QSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTV 115
Query: 166 FGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDC 199
FGRV+KGM VV+ +E V ++D+P D+ I++
Sbjct: 116 FGRVVKGMDVVQQIEKVKTDKNDKPYQDVKILNV 149
>Os06g0130500 Similar to Cyclophilin-like protein PPIL3b
Length = 160
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 13/149 (8%)
Query: 47 GRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRIVKGFMVQXXXXXX 106
G I E++ APRTAENF ALC A+G +Y G+ HR +KGFM+Q
Sbjct: 10 GDIKCEVFCDQAPRTAENFLALC--------ASG---YYDGTIFHRNIKGFMIQGGDPTG 58
Query: 107 XXXXXXESIYGLNFEDE-NFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVV 165
SI+G F DE LKH +G++SMAN+GP+TNGSQFFIT + PHL+G + V
Sbjct: 59 TGKGGT-SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTV 117
Query: 166 FGRVIKGMGVVRSMEHVSVGESDRPITDI 194
F +VI G V+ ME G DRP+ +I
Sbjct: 118 FAKVIHGFEVLDLMEKAQTGPGDRPLAEI 146
>Os08g0559400 Similar to Cyclophilin-like protein
Length = 164
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 90/167 (53%), Gaps = 18/167 (10%)
Query: 32 NPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIH 91
P L+ S+G +E+Y AP+T NF L +G +Y H
Sbjct: 9 TPEVTLETSMGA-----FTIEMYYKHAPKTCRNFLELS--RRG---------YYDNVIFH 52
Query: 92 RIVKGFMVQXXXXXXXXXXXXESIYGLNFEDE-NFVLKHERKGMLSMANAGPDTNGSQFF 150
RI+K F+VQ ESIYG FEDE LKH G+LSMANAGP+TNGSQFF
Sbjct: 53 RIIKDFIVQGGDPTGTGRGG-ESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFF 111
Query: 151 ITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIV 197
IT LDGKH +FGRV KGM +V+ + V +SDRPI ++ I+
Sbjct: 112 ITLAPCQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKIL 158
>Os01g0582400 Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase
Length = 499
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 47 GRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRIVKGFMVQXXXXXX 106
G + +EL+ AP+ NF LC + +Y G+ HR++K F+VQ
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLC-----------LEGYYDGTLFHRVIKSFLVQGGDPTG 70
Query: 107 XXXXXXESIYGLNFEDE-NFVLKHERKGMLSMANAG-PDTNGSQFFITTTRTPHLDGKHV 164
ESIYG F DE + L+ +G+++ ANAG P +NGSQFFI+ R LD K+
Sbjct: 71 SGTGG-ESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNT 129
Query: 165 VFGRVI-KGMGVVRSMEHVSVGESDRPI 191
+FG+V + + ++ + + DRP+
Sbjct: 130 IFGKVTGDSIFNLLALADIETDKDDRPV 157
>Os06g0670500 Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase
Length = 564
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 47 GRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRIVKGFMVQXXXXXX 106
G I V+L+ + P T +NF LC + +Y G H++ K F+ Q
Sbjct: 10 GDIEVDLHTDMCPLTTKNFLKLCKMK-----------YYNGCLFHKVEKDFLAQTGDPTG 58
Query: 107 XXXXXXESIYGLNFEDENFV--------LKHERKGMLSMANAGPDTNGSQFFIT-TTRTP 157
+S+Y + D+ L+H +KG ++MA+AG + N SQF+IT
Sbjct: 59 TGAGG-DSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVD 117
Query: 158 HLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVI 196
+LD KH VFG V +G + + V + RP DI I
Sbjct: 118 YLDDKHTVFGMVAEGFDTLTKISETYVDDKGRPFKDIRI 156
>Os06g0670400
Length = 521
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 47 GRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRIVKGFMVQXXXXXX 106
G I V+L+ + P T +NF LC + +Y G H+I K F+ Q
Sbjct: 10 GDIEVDLHTDMCPLTTKNFLKLCKMK-----------YYNGCLFHKIEKDFLAQTGDSTG 58
Query: 107 XXXXXXESIYGLNFEDENFV--------LKHERKGMLSMANAGPDTNGSQFFITTTR-TP 157
+S+Y + D+ L+H + G ++MA+AG + N SQF+IT
Sbjct: 59 TGAGG-DSVYKFLYGDQARFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVD 117
Query: 158 HLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVI 196
+LD KH VFG V +G + + V + RP DI I
Sbjct: 118 YLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRI 156
>Os02g0111200
Length = 139
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 51 VELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRIVKGFMVQXXXXXXXXXX 110
+ELYA + P TAENFRAL T + PLHYKG C+ + V+
Sbjct: 1 MELYADLVPLTAENFRALYTKK---------PLHYKGLCLSQHYPRIHVEGRRLRQGPWH 51
Query: 111 XXESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFGRVI 170
+ +ENF+L H+R + N + N SQFF TR P DG +VVFG +I
Sbjct: 52 RRRVHLRRHLPNENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCII 105
Query: 171 KGMGVVRSME-HVSVGESDRPITDIVIVDCGEL 202
G ++++E V V ++R ++VIV L
Sbjct: 106 SGFHNLKAIEAEVEVKIANR--GEVVIVPPPSL 136
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,697,714
Number of extensions: 456119
Number of successful extensions: 792
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 761
Number of HSP's successfully gapped: 17
Length of query: 403
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 300
Effective length of database: 11,657,759
Effective search space: 3497327700
Effective search space used: 3497327700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)