BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0596900 Os02g0596900|AK101163
(428 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0596900 Actin/actin-like family protein 879 0.0
Os08g0128300 Similar to Actin-like protein 3 (Actin-related... 256 2e-68
AK059967 225 5e-59
Os10g0510000 actin [Oryza sativa (japonica cultivar-group)] 219 4e-57
Os03g0718100 Actin 1 217 1e-56
Os05g0438800 Similar to Actin 1 217 1e-56
Os05g0106600 Similar to Actin 97 217 2e-56
Os11g0163100 Similar to Actin 7 (Actin 2) 216 2e-56
Os03g0836000 Similar to Actin 7 (Actin 2) 216 2e-56
Os12g0163700 Similar to Actin 7 (Actin 2) 193 2e-49
Os08g0369300 Similar to ARP2 (Actin-related protein 2) 158 7e-39
Os12g0641000 Similar to Actin 1 157 1e-38
Os01g0269900 Actin/actin-like family protein 121 9e-28
Os01g0964400 Similar to Actin 7 (Actin 2) 120 2e-27
Os08g0137200 Actin/actin-like family protein 116 4e-26
Os01g0866100 Similar to Actin 4 107 2e-23
>Os02g0596900 Actin/actin-like family protein
Length = 428
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/428 (97%), Positives = 419/428 (97%)
Query: 1 MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHS 60
MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHS
Sbjct: 1 MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHS 60
Query: 61 AGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPED 120
AGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPED
Sbjct: 61 AGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPED 120
Query: 121 HYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXX 180
HYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMT
Sbjct: 121 HYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDV 180
Query: 181 XXXATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEM 240
ATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEM
Sbjct: 181 GDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEM 240
Query: 241 YCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNN 300
YCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNN
Sbjct: 241 YCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNN 300
Query: 301 DFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLAS 360
DFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLAS
Sbjct: 301 DFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLAS 360
Query: 361 NARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICRT 420
NARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICRT
Sbjct: 361 NARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICRT 420
Query: 421 NPVFKGMY 428
NPVFKGMY
Sbjct: 421 NPVFKGMY 428
>Os08g0128300 Similar to Actin-like protein 3 (Actin-related protein 3)
Length = 180
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 144/170 (84%), Gaps = 1/170 (0%)
Query: 1 MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHS 60
MDAA+RPAVVIDNGTGY+K+GF+GN EPCF PTVVAVN++F Q+ + NW+AQ++
Sbjct: 1 MDAATRPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEM-CSSANWIAQYN 59
Query: 61 AGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPED 120
AGVMADLDFFIG++AL+ +SS Y +PI++GQV++WDTMERFWQQCIFNYLRC+PE+
Sbjct: 60 AGVMADLDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEE 119
Query: 121 HYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTK 170
HYFLLT+SP++ PE+RE GEIMFETFNVPGLYI+ Q VL+L+AGY K
Sbjct: 120 HYFLLTDSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSAGYAFLK 169
>AK059967
Length = 375
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 206/414 (49%), Gaps = 53/414 (12%)
Query: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
A+VIDNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 7 ALVIDNGTGMCKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGM 47
Query: 68 ---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFL 124
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H L
Sbjct: 48 GQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 104
Query: 125 LTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXA 184
LTE+PL P RE +IMFETFN P +Y+A Q VL+L A TT +
Sbjct: 105 LTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL-----DSGDGV 159
Query: 185 THIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYT 244
TH VP+ +GY + +I + + G+D+T ++ ++L ERG ++ R +KE CY
Sbjct: 160 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 219
Query: 245 CSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTT 304
D +E H + ++ + G T IG ERF PE F P + +
Sbjct: 220 ALDFEQEM--HTAASSSALE--KSYELPDGQVIT--IGNERFRAPEALFQPSFLGME-SA 272
Query: 305 PLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARL 364
+H I +D R+ LY N+VLSGG+TMF R+Q++L + +
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMQKELTALAPST-------- 324
Query: 365 GGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 325 --------MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIV 370
>Os10g0510000 actin [Oryza sativa (japonica cultivar-group)]
Length = 377
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 203/422 (48%), Gaps = 57/422 (13%)
Query: 2 DAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSA 61
DA +V DNGTG K GFAG+ P + P++V G+ R
Sbjct: 3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HT 43
Query: 62 GVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDP 118
GVM + D ++G++A ++ L YPI +G V NWD ME+ W +N LR P
Sbjct: 44 GVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP 100
Query: 119 EDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXX 178
E+H LLTE+PL P RE +IMFETF+VP +Y+A Q VL+L A TT +
Sbjct: 101 EEHPILLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLD---- 156
Query: 179 XXXXXATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVK 238
+H VP+ +GY + +I + + G+D+T + ++L ERG ++ R +K
Sbjct: 157 -SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIK 215
Query: 239 EMYCYTCSDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPE 296
E Y D +E K K + G IG ERF PE+ F P
Sbjct: 216 EKLAYVALDYEQELETAKSSSSVEKSYELPDG--------QVITIGAERFRCPEVMFQPS 267
Query: 297 IYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDAR 356
+ + +H I +D R+ LY NIVLSGGSTMF R+ +++ + +
Sbjct: 268 LIGME-APGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSS 326
Query: 357 VLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGAS 416
+++ VV+ P ++Y+VW GGS+LAS + F + ++AEYEE G +
Sbjct: 327 ----------------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPA 370
Query: 417 IC 418
I
Sbjct: 371 IV 372
>Os03g0718100 Actin 1
Length = 377
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 201/422 (47%), Gaps = 57/422 (13%)
Query: 2 DAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSA 61
DA +V DNGTG K GFAG+ P + P++V G+ R
Sbjct: 3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HT 43
Query: 62 GVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDP 118
GVM + D ++G++A ++ L YPI +G V NWD ME+ W +N LR P
Sbjct: 44 GVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP 100
Query: 119 EDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXX 178
E+H LLTE+PL P RE +IMFETFN P +Y+A Q VL+L A TT +
Sbjct: 101 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD---- 156
Query: 179 XXXXXATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVK 238
+H VP+ +GY + +I + + G+D+T ++ ++L ERG ++ R +K
Sbjct: 157 -SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMK 215
Query: 239 EMYCYTCSDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPE 296
E Y D +E K K + G IG ERF PE+ F P
Sbjct: 216 EKLSYIALDYDQEMETAKTSSSVEKSYELPDG--------QVITIGAERFRCPEVLFQPS 267
Query: 297 IYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDAR 356
+ +H I +D R+ LY NIVLSGG+TMF R+ +++ + +
Sbjct: 268 FIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS 326
Query: 357 VLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGAS 416
+++ VV+ P ++Y+VW GGS+LAS + F + KAEY+E G S
Sbjct: 327 ----------------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPS 370
Query: 417 IC 418
I
Sbjct: 371 IV 372
>Os05g0438800 Similar to Actin 1
Length = 376
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 199/413 (48%), Gaps = 53/413 (12%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 9 IVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 49
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A A+ L YPI +G V NWD ME+ W +N LR PEDH LL
Sbjct: 50 QKDAYVGDEAQAKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLL 106
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXAT 185
TE+PL P RE +IMFETFN P +Y+A Q VL+L A TT + +
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLD-----SGDGVS 161
Query: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
H VP+ +GY + +I + + G+D+T + ++L ERG + ++ R +KE Y
Sbjct: 162 HTVPIYEGYTLPHAILRLDLAGRDLTDHLMKILTERGYSLTTSAEREIVRDIKEKLAYVA 221
Query: 246 SDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTP 305
D +E + + + IG ERF PE+ F P + + +
Sbjct: 222 LDYEQELETSRSSSSVEKSY------EMPDGQVITIGSERFRCPEVLFQPSLVGME-SPG 274
Query: 306 LHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLG 365
+H I +D R+ LY N+VLSGGSTMF R+ +++ + +
Sbjct: 275 IHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSS--------- 325
Query: 366 GDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
++V V++ P ++Y+VW GGS+LAS + F + +K EY+E G I
Sbjct: 326 -------MKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIV 371
>Os05g0106600 Similar to Actin 97
Length = 377
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 201/415 (48%), Gaps = 57/415 (13%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 50
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LL
Sbjct: 51 QKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXAT 185
TE+PL P RE +IMFETFNVP +Y+A Q VL+L A TT + +
Sbjct: 108 TEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLD-----SGDGVS 162
Query: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
H VP+ +GY + +I + + G+D+T + ++L ERG ++ R +KE Y
Sbjct: 163 HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVA 222
Query: 246 SDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFT 303
D +E K+ K + G IG ERF PE+ F P + +
Sbjct: 223 LDYEQELETAKNSSSVEKSYELPDG--------QVITIGAERFRCPEVLFQPSMIGME-A 273
Query: 304 TPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNAR 363
+H I +D R+ LY NIVLSGG+TMF R+ +++ + +
Sbjct: 274 AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS------- 326
Query: 364 LGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
+++ VV+ P ++Y+VW GGS+LAS + F + +K EY+E G +I
Sbjct: 327 ---------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIV 372
>Os11g0163100 Similar to Actin 7 (Actin 2)
Length = 377
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 199/415 (47%), Gaps = 57/415 (13%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 50
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LL
Sbjct: 51 QKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXAT 185
TE+PL P RE +IMFETFNVP +Y+A Q VL+L A TT + +
Sbjct: 108 TEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLD-----SGDGVS 162
Query: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
H VP+ +GY + +I + + G+D+T + ++L ERG ++ R +KE Y
Sbjct: 163 HTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVA 222
Query: 246 SDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFT 303
D +E K K + G IG ERF PE+ F P +
Sbjct: 223 LDYEQELEAAKSSSSVEKSYELPDG--------QVITIGAERFRCPEVLFQPSFIGME-A 273
Query: 304 TPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNAR 363
+H I +D R+ LY NIVLSGGSTMF R+ +++ + +
Sbjct: 274 PGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSS------- 326
Query: 364 LGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
+++ VV+ P ++Y+VW GGS+LAS + F + +K EY+E G +I
Sbjct: 327 ---------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIV 372
>Os03g0836000 Similar to Actin 7 (Actin 2)
Length = 377
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 199/415 (47%), Gaps = 57/415 (13%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 50
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LL
Sbjct: 51 QKDAYVGDEAQSKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILL 107
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXAT 185
TE+PL P RE +IMFETFN P +Y+A Q VL+L A TT + T
Sbjct: 108 TEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLD-----SGDGVT 162
Query: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
H VP+ +GY + +I + + G+D+T + ++L ERG ++ R +KE Y
Sbjct: 163 HTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKLAYIA 222
Query: 246 SDIVKEFN--KHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFT 303
D +E K K + G IG ERF PE+ F P + +
Sbjct: 223 LDYEQELETAKSSSSVEKSYELPDG--------QVITIGAERFRCPEVLFQPSLIGME-A 273
Query: 304 TPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNAR 363
+H I +D R+ LY NIVLSGG+TMF R+ +++ + +
Sbjct: 274 PGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSS------- 326
Query: 364 LGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
+++ VV+ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 327 ---------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIV 372
>Os12g0163700 Similar to Actin 7 (Actin 2)
Length = 363
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 190/413 (46%), Gaps = 67/413 (16%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 50
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE
Sbjct: 51 QKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE------ 101
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXAT 185
E +IMFE+FNVP +Y+A Q VL+L A TT + +
Sbjct: 102 -----------EKMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG-----VS 145
Query: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
H VP+ +GY + +I + + G+D+T + ++L ERG ++ R +KE Y
Sbjct: 146 HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVA 205
Query: 246 SDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTP 305
D +E N N S P IG ERF PE+ F P + +
Sbjct: 206 LDYEQELNAAAAAKNSSSVEKSYELPD---GQVITIGAERFRCPEVLFQPSLVGME-AAG 261
Query: 306 LHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLG 365
+H I +D R+ LY N+VLSGGSTMF R+ +++ + +
Sbjct: 262 IHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSS--------- 312
Query: 366 GDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
+++ VV+ P ++Y+VW GGS+LAS + F + +KAEY+E G +I
Sbjct: 313 -------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIV 358
>Os08g0369300 Similar to ARP2 (Actin-related protein 2)
Length = 441
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 190/414 (45%), Gaps = 68/414 (16%)
Query: 1 MDAASRPAVVIDNGTGYTKMGFAG-----NVEPCFITPTVVAVNDTFAGQTRANTTKGNW 55
MD+ + VV DNGTGY K GFAG +V PC + ++ ++ Q + G
Sbjct: 1 MDSGN--VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVG-- 56
Query: 56 MAQHSAGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLR 115
ADL + ++SYP+ NG V++WD M W ++ L+
Sbjct: 57 ------AACADL--------------RHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELK 96
Query: 116 CDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTX 175
DP + LLT+ PL P + RE E MFE +N G++I Q VL+L A + +T
Sbjct: 97 VDPSECKILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYA-----QGLLTG 151
Query: 176 XXXXXXXXATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVAR 235
TH+VPV DG+ + + + G+ +T ++ LL RG S +
Sbjct: 152 LVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGLL-----SHFIEL 206
Query: 236 RVKEMYCYTCSDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHP 295
+ + MY Y D +E+ + E +K ++ + +G ERF PE F P
Sbjct: 207 KRENMYSY---DYKREY-QLGLETTILVKSYTLPDGR-----VIKVGTERFQAPEALFTP 257
Query: 296 EIY--NNDFTTPLHVVID-----------KCIQSSPIDTRRALYKNIVLSGGSTMFKDFH 342
+ Y N D T +ID +CIQ ID R LY++IVLSGGSTM+
Sbjct: 258 DQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLP 317
Query: 343 RRLQRD-LKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLA 395
RL+++ L + +D VL N + + + + P +++ V+ GG+VLA
Sbjct: 318 SRLEKEMLDRYLDV-VLKGNK-----DGLKKLRLRIEDPPRRKHMVYLGGAVLA 365
>Os12g0641000 Similar to Actin 1
Length = 243
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 125/261 (47%), Gaps = 30/261 (11%)
Query: 87 LSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFET 146
L YPI +G V NWD ME+ W +N LR PE+H LLTE+PL P RE +IMFET
Sbjct: 2 LKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 61
Query: 147 FNVPGLYIACQPVLALAAGYTTTKCEMTXXXXXXXXXATHIVPVADGYVIGSSIRSIPIT 206
FN P +Y+A Q VL+L A TT + +H VP+ +GY + +I + +
Sbjct: 62 FNAPAMYVAIQAVLSLYASGRTTGIVL-----DSGDGVSHTVPIYEGYALPHAILRLDLA 116
Query: 207 GKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEF---------NKHDR 257
G+D+T ++ ++L ERG ++ R VKE Y D +E K
Sbjct: 117 GRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFDQEMATAATGSSVEKSYE 176
Query: 258 EPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSS 317
P+ + IG ERF PE+ F P + +H I
Sbjct: 177 LPDGQV---------------ITIGAERFRCPEVLFQPSFVGME-AAGIHETTYNSIMKC 220
Query: 318 PIDTRRALYKNIVLSGGSTMF 338
+D R+ LY NIVLSGG+TMF
Sbjct: 221 DVDIRKDLYGNIVLSGGTTMF 241
>Os01g0269900 Actin/actin-like family protein
Length = 429
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 175/463 (37%), Gaps = 96/463 (20%)
Query: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
VV+DNG G K GF G++ P + P +A W+
Sbjct: 7 VVVLDNGGGLLKAGFGGDMNPTAVVPNCMA----------KPPGSKKWL----------- 45
Query: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTE 127
+ + A+ L PI G + N + W++ I N L+ DP + LL E
Sbjct: 46 ---VADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVE 102
Query: 128 SPLTPPETREYTGEIMFETFNVPGLYIACQPVL------ALAAGYTTTKCEMTXXXXXXX 181
PP + T E++FE L +A P L + +C +
Sbjct: 103 PQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSF 162
Query: 182 XXATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEE------------ 229
TH PV + + ++R + + GK +T ++++L+ R ++ E
Sbjct: 163 ---THASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYRSLNVMDETLLIDDAKEKLCF 219
Query: 230 -SFDV------ARRVKEMYCYTCSDI-----------VKEFN---------------KHD 256
S DV AR + CS I VK+ + + D
Sbjct: 220 VSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKD 279
Query: 257 REPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQS 316
+ K KP+ + ERFL PE+ FHP I L I + IQ+
Sbjct: 280 SSDSDRSKFEDKKKPELSQNEFV-LTNERFLVPEMLFHP-IDLGMNQAGLAECIVRAIQA 337
Query: 317 SPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVN 376
+ L++ I+L+GGST+F F RL+++L+ +V +V
Sbjct: 338 CHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLV----------------PDDYQVK 381
Query: 377 VVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASICR 419
+++ W GGS+LA +F C TK+EYEE G+ CR
Sbjct: 382 IIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCR 424
>Os01g0964400 Similar to Actin 7 (Actin 2)
Length = 222
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 26/164 (15%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 50
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LL
Sbjct: 51 QKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLAL-AAGYTT 168
TE+PL P RE +IMFETFNVP +Y+A Q VL+L A+G TT
Sbjct: 108 TEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
>Os08g0137200 Actin/actin-like family protein
Length = 443
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 195/451 (43%), Gaps = 65/451 (14%)
Query: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV-AVNDTFAGQTRANTTKGNWMAQHSAGVM-A 65
A+VID G+ K G+AG+ P + P+VV ++ T + + G
Sbjct: 9 AIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPM 68
Query: 66 DLD-------FFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDP 118
D+D ++G++ R + + P+ +G V +WD ++ W L +P
Sbjct: 69 DVDKAKTKRKLYVGQELEFRR---DHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINP 125
Query: 119 EDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVL-ALAAGYTTTKCEMTXXX 177
E+H L+ E + RE E+MFE + VP L++A VL + A+G T+
Sbjct: 126 EEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATS------LV 179
Query: 178 XXXXXXATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESF------ 231
+T + V DGYV+ S+ + PI G+ +T + + L+ +G I P SF
Sbjct: 180 VDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVG 239
Query: 232 ---------DVARRVKEMYCYTCSDIVKEFNKHD-REPNKYIKHWSGIK-PKTGAKY--- 277
D+ + Y I + + R P+ + P T +
Sbjct: 240 PGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTTSYELPDG 299
Query: 278 -TCDIGYERFLGPEIFFHPEIYN-----NDFTTPLHV------VIDKCIQSSPIDTRRAL 325
T ++G +RF P+I F+P + + F + V VID + +D R+ L
Sbjct: 300 QTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVID-SVNRCDVDIRKEL 358
Query: 326 YKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRY 385
+I+LSGGS+ RL++++ + N R+ A +E +R+
Sbjct: 359 LSSILLSGGSSSILQLKERLEKEV-----LEESSGNTRVKVLASGNSVE--------RRF 405
Query: 386 AVWFGGSVLASTAEFYEACHTKAEYEEYGAS 416
+VW GGS+LAS F + +KAEYEE+G S
Sbjct: 406 SVWIGGSILASLGSFQQMWFSKAEYEEHGVS 436
>Os01g0866100 Similar to Actin 4
Length = 203
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 81/152 (53%), Gaps = 25/152 (16%)
Query: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 9 IVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 49
Query: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LL
Sbjct: 50 QKDAYVGDEAQSKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQ 157
TE+P+ P RE +IMFETFN P +Y+A Q
Sbjct: 107 TEAPMNPKANREKMTQIMFETFNCPAMYVAIQ 138
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,259,432
Number of extensions: 640394
Number of successful extensions: 1149
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1090
Number of HSP's successfully gapped: 18
Length of query: 428
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 324
Effective length of database: 11,605,545
Effective search space: 3760196580
Effective search space used: 3760196580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)