BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0255000 Os02g0255000|AK100312
(299 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0255000 Similar to Cyclic nucleotide-gated ion channel... 583 e-167
Os06g0527100 Similar to Cyclic nucleotide-gated channel A (... 514 e-146
Os03g0646300 Similar to Cyclic nucleotide-gated channel A (... 360 e-100
Os12g0163000 Similar to Cyclic nucleotide-gated channel A (... 317 6e-87
Os02g0627700 Similar to Cyclic nucleotide-gated channel A (... 310 8e-85
Os09g0558300 Similar to Cyclic nucleotide-gated channel A (... 308 4e-84
Os04g0643600 Similar to Cyclic nucleotide-gated channel C (... 299 2e-81
Os06g0188000 Similar to Cyclic nucleotide-gated channel C (... 289 2e-78
Os02g0789100 Cyclic nucleotide-binding domain containing pr... 247 9e-66
Os08g0254600 Cyclic nucleotide-binding domain containing pr... 221 5e-58
Os01g0782700 Similar to Cyclic nucleotide-gated ion channel... 199 2e-51
Os03g0758300 Similar to Cyclic nucleotide-gated ion channel... 199 2e-51
Os05g0502000 Similar to Cyclic nucleotide-gated ion channel... 196 2e-50
Os02g0773400 Ion transport domain containing protein 184 6e-47
>Os02g0255000 Similar to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic
nucleotide-and calmodulin-regulated ion channel 1)
Length = 299
Score = 583 bits (1504), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/299 (94%), Positives = 283/299 (94%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL
Sbjct: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT
Sbjct: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
Query: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK
Sbjct: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
Query: 181 FVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAI 240
FVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAI
Sbjct: 181 FVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAI 240
Query: 241 VXXXXXXXXXXXXXXXXRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDQ 299
V RFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDQ
Sbjct: 241 VSDGSSSLSLGAALYASRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDQ 299
>Os06g0527100 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 694
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 244/299 (81%), Positives = 268/299 (89%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
MRVK RDT+QWM++RLLP+NLKERI RHE+YRW +T GVDEE LL NLPK+LRR IKRHL
Sbjct: 396 MRVKSRDTDQWMSYRLLPENLKERIRRHEKYRWHQTSGVDEELLLMNLPKDLRRAIKRHL 455
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
CLSLLMRVPMFENMD++LL+A+CDRLKP+LYTEGSCIIRE DPVNEMLFIMRGNL SMTT
Sbjct: 456 CLSLLMRVPMFENMDDQLLNALCDRLKPVLYTEGSCIIREEDPVNEMLFIMRGNLMSMTT 515
Query: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
NGG+TGFFNS+++KGGDFCGEELLTWALDPTS S+LPSSTRTVKT+SEVEAFALRA+DLK
Sbjct: 516 NGGRTGFFNSDVLKGGDFCGEELLTWALDPTSVSSLPSSTRTVKTMSEVEAFALRAEDLK 575
Query: 181 FVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAI 240
FVATQFRRLHSKQLQHTF+FYSQ WRTWAACFIQAAWHRYCRKK+ED+L EKEKRLQ AI
Sbjct: 576 FVATQFRRLHSKQLQHTFKFYSQHWRTWAACFIQAAWHRYCRKKIEDSLREKEKRLQFAI 635
Query: 241 VXXXXXXXXXXXXXXXXRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDQ 299
V RFAGNMMRILRRNATRKARL+E VPARLLQKPAEPNF AE+Q
Sbjct: 636 VNDGATTLSFRAAIYASRFAGNMMRILRRNATRKARLKESVPARLLQKPAEPNFAAEEQ 694
>Os03g0646300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 696
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/297 (58%), Positives = 225/297 (75%), Gaps = 21/297 (7%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
MRVKRRD+EQWM HRLLP L+ER+ R++ Y+W TRGVDEE L++NLPK+LRR+IKRHL
Sbjct: 420 MRVKRRDSEQWMHHRLLPQELRERVRRYDAYKWVNTRGVDEEVLVANLPKDLRRDIKRHL 479
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
CL L+ RVP+F NMDE+LLDA+C+RL+P LYTE + IIREGDPV++MLFI+RG LES+TT
Sbjct: 480 CLGLVRRVPLFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLESITT 539
Query: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
+GG++GFFN ++++ DFCGEELLTWALDP + +LPSSTRTV+ LSEVEAFAL +D+LK
Sbjct: 540 DGGRSGFFNRSLLEESDFCGEELLTWALDPKAGLSLPSSTRTVRALSEVEAFALHSDELK 599
Query: 181 FVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAI 240
FVA QFRR+HSKQ+QHTFRFYSQQWRTWAA +IQAAW R+ +++ L+ +
Sbjct: 600 FVAGQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWRRHLKRRA----IRSSTGLKTTM 655
Query: 241 VXXXXXXXXXXXXXXXXRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAE 297
+ RFA N MR + R +R+A +P + KP+EP+F A+
Sbjct: 656 LVS--------------RFAANAMRGVHRQRSRRADEVLMMP---MPKPSEPDFGAD 695
>Os12g0163000 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 648
Score = 317 bits (812), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 146/233 (62%), Positives = 187/233 (80%)
Query: 2 RVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHLC 61
RVKRRD E+WM HR LP L+ER+ R QY+W TRGVDEE +L +LP +LRREI+RHLC
Sbjct: 318 RVKRRDIEEWMRHRQLPLELQERVRRFFQYKWLATRGVDEESILQSLPLDLRREIQRHLC 377
Query: 62 LSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTN 121
L+L+ RVP F MDE+LLDA+C+RL L T+ + I+REGDPV+EMLF++RG LES TT+
Sbjct: 378 LALVRRVPFFSQMDEQLLDAICERLVSSLSTKDAYIVREGDPVSEMLFVIRGELESSTTD 437
Query: 122 GGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKF 181
GG+T FF+S ++ GDFCGEELLTWAL P + N P STRTV++++EVEAFALRA+DLK+
Sbjct: 438 GGRTNFFSSITLRPGDFCGEELLTWALMPNPSLNFPQSTRTVRSVTEVEAFALRAEDLKY 497
Query: 182 VATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEK 234
VA QF+RLHSK+LQH FR+YS QWR+W ACF+Q AW RY ++KL L ++E+
Sbjct: 498 VANQFKRLHSKRLQHAFRYYSHQWRSWGACFVQGAWRRYKKRKLARELSKQEE 550
>Os02g0627700 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 686
Score = 310 bits (794), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 203/298 (68%), Gaps = 30/298 (10%)
Query: 2 RVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHLC 61
R KR D E+WM HR +P LK+ + R+ QY+W TRGVDEE LL +LP ++RR+IKRHLC
Sbjct: 418 RTKRTDMERWMNHRQIPQPLKQCVRRYHQYKWLATRGVDEEALLEDLPMDIRRDIKRHLC 477
Query: 62 LSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTN 121
L L+ RVP+F+ MDE++L+A+C+RL+P LYT G+ ++RE DPV+ MLFI+RG L+S TT
Sbjct: 478 LDLVRRVPLFDEMDERMLEAICERLRPALYTRGTRLVRELDPVDSMLFIIRGYLDSYTTQ 537
Query: 122 GGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKF 181
GG++GFFNS I G+FCGEELL WALDP A++LP STRTV+ +SEVEAFAL ADDL+F
Sbjct: 538 GGRSGFFNSCRIGAGEFCGEELLPWALDPRPAASLPLSTRTVRAVSEVEAFALVADDLRF 597
Query: 182 VATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAIV 241
VA+QFRRLHS +++H FRFYS QWRTWAACFIQAAW R R++ L +E
Sbjct: 598 VASQFRRLHSARIRHRFRFYSHQWRTWAACFIQAAWRRNKRRRASMELRMREG------- 650
Query: 242 XXXXXXXXXXXXXXXXRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDQ 299
G +R R + KA L++KP EP+F E++
Sbjct: 651 --------------GEARPGGSVRCRRHSCDGKA---------LIKKPMEPDFTVEEE 685
>Os09g0558300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 713
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 143/228 (62%), Positives = 181/228 (79%)
Query: 2 RVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHLC 61
R+++RD E+WM H LPD L++R+ R Q +W TRGV+EE +L LP ++RR+++RHLC
Sbjct: 413 RLRQRDMEEWMRHHQLPDELQDRVRRFVQVKWLATRGVEEESILQALPADIRRDVQRHLC 472
Query: 62 LSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTN 121
L L+ RVP F MD +LLDA+C+RL L E + I REGDPVNEMLF++RG LES TTN
Sbjct: 473 LDLVRRVPFFSEMDYQLLDAICERLVSFLCPERTYISREGDPVNEMLFVIRGKLESSTTN 532
Query: 122 GGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKF 181
GG++ FFNS I++ GDF GEELLTWAL P + + P STRTV++L+EVEAFALRA+DLKF
Sbjct: 533 GGRSNFFNSIILRPGDFAGEELLTWALLPKTNVHFPLSTRTVQSLTEVEAFALRAEDLKF 592
Query: 182 VATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTL 229
VA QFRRLHSK+LQHTFRFYS WRTWAACFIQAAW ++ R+KL ++L
Sbjct: 593 VANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRQHQRRKLAESL 640
>Os04g0643600 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 252
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/257 (57%), Positives = 187/257 (72%), Gaps = 7/257 (2%)
Query: 42 EGLLSNLPKNLRREIKRHLCLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREG 101
E L+ LPK+LRR+IKRHLCL L+ RVP+FENMDE+LLDA+C+RL+P LYTE I+REG
Sbjct: 1 ENLVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREG 60
Query: 102 DPVNEMLFIMRGNLESMTTNGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTR 161
DPV+EM FI+ G LES TT+GG++GFFN +K G FCG+ELLTWALDP SA+N P+STR
Sbjct: 61 DPVDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTR 120
Query: 162 TVKTLSEVEAFALRADDLKFVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYC 221
TVK L+EVEAFAL A++LKFVA+QFRRLHS+Q+QHTFRFYSQ WRTWAACFIQAAW RY
Sbjct: 121 TVKALTEVEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYY 180
Query: 222 RKKLEDTLFEKEKRLQAAIVXXXXXXXXXXXXXXXXRFAGNMMRILRRNATRKARLQERV 281
++K+ + ++E+ A RFA N +R + R +R + R+
Sbjct: 181 KRKMAEQHRKEEE--AANRQSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRL 238
Query: 282 PARLLQKPAEPNFFAED 298
P KP EP+F ++
Sbjct: 239 P-----KPPEPDFAVDE 250
>Os06g0188000 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 245
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 179/260 (68%), Gaps = 19/260 (7%)
Query: 39 VDEEGLLSNLPKNLRREIKRHLCLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCII 98
VDEE +L LP +LRR+IKRHLCL L+ RVP F MD +LLDA+C+RL L T G+ I+
Sbjct: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
Query: 99 REGDPVNEMLFIMRGNLESMTTNGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPS 158
REGDPV EMLFI+RG LES TT+GG+TGFFNS +K GDFCGEELL WAL P NLPS
Sbjct: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
Query: 159 STRTVKTLSEVEAFALRADDLKFVATQFRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWH 218
STRTVKT+ EVEAFALRA+DLKFVA+QFRRLHS++LQHTFR+YS WRTWAACFIQAAW
Sbjct: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWR 180
Query: 219 RYCRKKLEDTLFEKEKRLQAAIVXXXXXXXXXXXXXXXXRFAGNMMRILRRNATRK-ARL 277
RY R++L L +E G+ L NA RK A +
Sbjct: 181 RYKRRRLAKDLSIRESFFSRRSFEDD----------------GSPEHSLVLNAVRKGAHI 224
Query: 278 QERVPARLLQKPAEPNFFAE 297
+ +P +KP+EP+F AE
Sbjct: 225 IKELPK--FRKPSEPDFSAE 242
>Os02g0789100 Cyclic nucleotide-binding domain containing protein
Length = 480
Score = 247 bits (630), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 116/167 (69%), Positives = 133/167 (79%)
Query: 68 VPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTNGGQTGF 127
VP F MD +LLDA+C+RL L T+G+ I+REGDPV EMLFI+RG LES TTNGG+TGF
Sbjct: 258 VPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGF 317
Query: 128 FNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKFVATQFR 187
FNS +K GDFCGEELL WAL P NLPSSTRTVK L EVEAFAL+A+DLKFVA QFR
Sbjct: 318 FNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQFR 377
Query: 188 RLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEK 234
RLHSK+LQHTFR+YS WRTWA+CFIQAAW RY R+K+ L +E
Sbjct: 378 RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRES 424
>Os08g0254600 Cyclic nucleotide-binding domain containing protein
Length = 230
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 125/154 (81%)
Query: 66 MRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTNGGQT 125
+VP F MD +LLDA+C+R+ L TEG+ I REGDPV MLFI+RG LES TT+GG+T
Sbjct: 1 FQVPFFSAMDHQLLDAICERMTYFLRTEGTYITREGDPVKVMLFIIRGKLESSTTDGGRT 60
Query: 126 GFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKFVATQ 185
GFFNS I+K GDFCGEELLTWAL P+S + PSSTRTVKT++E+EAF+L+ADD+K VA+
Sbjct: 61 GFFNSIILKPGDFCGEELLTWALLPSSRDSYPSSTRTVKTIAELEAFSLQADDIKCVAST 120
Query: 186 FRRLHSKQLQHTFRFYSQQWRTWAACFIQAAWHR 219
FR +HSK LQHTFR +S QWRTWAA FIQ+AW R
Sbjct: 121 FRMMHSKHLQHTFRLHSYQWRTWAARFIQSAWRR 154
>Os01g0782700 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 666
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 153/237 (64%), Gaps = 4/237 (1%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
M+ + R E WM + LP + + R+ +HE+ RW TRGVDE ++ +LP+ LRR+IK HL
Sbjct: 399 MQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHL 458
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
CL L+ +VP+F++MD+ +L+ +CDR+K +++ +G I+REGDPV MLFI+RG+L+S +
Sbjct: 459 CLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQS--S 516
Query: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
+TG + + G+F G+ELL+W + LP+S+ T+ T+ EAF L A D+K
Sbjct: 517 QVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVK 576
Query: 181 FVATQFRRLHSK-QLQHTFRFYSQQWRTWAACFIQAAWHRY-CRKKLEDTLFEKEKR 235
+V FR + +++ + R+YS WRTWAA +Q AW RY RK L F + +R
Sbjct: 577 YVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPRR 633
>Os03g0758300 Similar to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic
nucleotide-and calmodulin-regulated ion channel 2)
(DEFENSE NO DEATH 1)
Length = 618
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 148/228 (64%), Gaps = 3/228 (1%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
M+++ RD E WM R LP L++R+ ++E+ RW G +E ++ +LP+ LRR+IKR+L
Sbjct: 356 MQLRFRDMEWWMRRRQLPSRLRQRVRKYERERWAAITGDEEMEMIKDLPEGLRRDIKRYL 415
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
CL L+ +VP+F MD+ +LD +CDRL+P++++ G +IREGDPV M+F+++G L S T
Sbjct: 416 CLELVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDPVQRMVFVLQGKLRS--T 473
Query: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
G + ++ G+F G+ELL+W L S LP+S+ T + + +AF L A DL+
Sbjct: 474 QPLAKGVVATCMLGAGNFLGDELLSWCLRRPSLDRLPASSATFECVETAQAFCLDAPDLR 533
Query: 181 FVATQFR-RLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLED 227
F+ QFR + +++L+ T R+YS WRTWAA IQ AW RY + D
Sbjct: 534 FITEQFRYKFANEKLKRTARYYSSNWRTWAAVNIQLAWRRYKARTTTD 581
>Os05g0502000 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 691
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 149/238 (62%), Gaps = 6/238 (2%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
M+ + R E WM H+ +P ++R+ + E+ RW TRGVDE ++ +LP+ LRR+IK HL
Sbjct: 426 MQTRLRGLEWWMEHKGVPHGFRQRVRQFERQRWAATRGVDECQIVRDLPEGLRRDIKYHL 485
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLE-SMT 119
CL L+ +VP+F +MD+ +L+ +CDR+K +++ +G I+REGDPV MLFI+RG+L+ S
Sbjct: 486 CLDLVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGDPVQRMLFIVRGHLQCSQV 545
Query: 120 TNGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDL 179
G T + + G+F G+ELL+W + LP+S+ T+ T EAF L A D+
Sbjct: 546 MRNGATSWCT---LGPGNFSGDELLSWCMRRPFMERLPASSSTLVTAESTEAFGLEAGDV 602
Query: 180 KFVATQFR-RLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRY-CRKKLEDTLFEKEKR 235
K+V FR S +++ + R+YS WRTWAA +Q AW RY RK L F + +R
Sbjct: 603 KYVTQHFRYTFTSDKVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPRR 660
>Os02g0773400 Ion transport domain containing protein
Length = 772
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 155/237 (65%), Gaps = 19/237 (8%)
Query: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
M+++RRD EQWM+HR LP++L+ R+ R E++ W T+GV+EE LLSNLP++++R+I+RH
Sbjct: 513 MQLRRRDVEQWMSHRRLPEDLRRRVRRAERFTWAATQGVNEEELLSNLPEDIQRDIRRHF 572
Query: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
L +V +F MD +LDA+CD+L+ LY GS I+ +G PV +M+FI+RG LES++
Sbjct: 573 -FRFLNKVRLFTLMDWPILDAICDKLRQNLYISGSDILYQGGPVEKMVFIVRGKLESISA 631
Query: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPS----------STRTVKTLSEVE 170
+G + + GD CGEELLTW L+ +SA+ + RTV+ L+ VE
Sbjct: 632 DGSKAP------LHEGDVCGEELLTWYLEHSSANRDGGRMRFHGMRLVAIRTVRCLTNVE 685
Query: 171 AFALRADDLKFVATQFRR-LHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLE 226
AF LRA DL+ V +QF R L + ++Q R+ S WRT AA IQ AW RY ++L+
Sbjct: 686 AFVLRASDLEEVTSQFSRFLRNPRVQGAIRYESPYWRTIAATRIQVAW-RYRNRRLK 741
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,940,753
Number of extensions: 392324
Number of successful extensions: 1231
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1216
Number of HSP's successfully gapped: 14
Length of query: 299
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 199
Effective length of database: 11,814,401
Effective search space: 2351065799
Effective search space used: 2351065799
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)