BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0782700 Os01g0782700|Os01g0782700
(666 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0782700 Similar to Cyclic nucleotide-gated ion channel... 1110 0.0
Os05g0502000 Similar to Cyclic nucleotide-gated ion channel... 900 0.0
Os03g0758300 Similar to Cyclic nucleotide-gated ion channel... 505 e-143
Os02g0627700 Similar to Cyclic nucleotide-gated channel A (... 297 2e-80
Os06g0527100 Similar to Cyclic nucleotide-gated channel A (... 289 5e-78
Os12g0163000 Similar to Cyclic nucleotide-gated channel A (... 280 2e-75
Os09g0558300 Similar to Cyclic nucleotide-gated channel A (... 280 2e-75
Os03g0646300 Similar to Cyclic nucleotide-gated channel A (... 273 2e-73
Os02g0773400 Ion transport domain containing protein 271 9e-73
Os02g0255000 Similar to Cyclic nucleotide-gated ion channel... 199 6e-51
Os06g0188000 Similar to Cyclic nucleotide-gated channel C (... 175 1e-43
Os04g0643600 Similar to Cyclic nucleotide-gated channel C (... 157 2e-38
Os02g0789100 Cyclic nucleotide-binding domain containing pr... 147 3e-35
Os08g0254600 Cyclic nucleotide-binding domain containing pr... 128 1e-29
>Os01g0782700 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 666
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/654 (85%), Positives = 558/654 (85%)
Query: 13 HGVGVVQRLWLEEQEXXXXXXXXXXXXXWAWAPLEPRRAGWWAREWDRAYLLACAAGLMV 72
HGVGVVQRLWLEEQE WAWAPLEPRRAGWWAREWDRAYLLACAAGLMV
Sbjct: 13 HGVGVVQRLWLEEQERKPPPKRGGGKRRWAWAPLEPRRAGWWAREWDRAYLLACAAGLMV 72
Query: 73 DPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLLMRLRAAVRXXXXXXXXX 132
DPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLLMRLRAAVR
Sbjct: 73 DPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLLMRLRAAVRPPEEDDGAD 132
Query: 133 XXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPVMQVIVWVAAPAMIRAGSTTA 192
QVARPVSRKGLMLDMFVILPVMQVIVWVAAPAMIRAGSTTA
Sbjct: 133 EEVAAERGAGGNGGGPAPAQVARPVSRKGLMLDMFVILPVMQVIVWVAAPAMIRAGSTTA 192
Query: 193 VMTVLLVSFLFEYLPKIYHAVRLLRRMQNTYVFGTIWWGIALNLMAYFVAAHAVGACWYL 252
VMTVLLVSFLFEYLPKIYHAVRLLRRMQNTYVFGTIWWGIALNLMAYFVAAHAVGACWYL
Sbjct: 193 VMTVLLVSFLFEYLPKIYHAVRLLRRMQNTYVFGTIWWGIALNLMAYFVAAHAVGACWYL 252
Query: 253 LGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLAWALDASARGTCLD 312
LGAQRATKCLKEQCAQ DRLAWALDASARGTCLD
Sbjct: 253 LGAQRATKCLKEQCAQGGSGCAPGALACAAPLYYGGAVGGVGADRLAWALDASARGTCLD 312
Query: 313 SGDNYQYGAYKWTVMLVANPSRLEKILLPIFWGLMTLSTFGNLASTTEWLEIVFNXXXXX 372
SGDNYQYGAYKWTVMLVANPSRLEKILLPIFWGLMTLSTFGNLASTTEWLEIVFN
Sbjct: 313 SGDNYQYGAYKWTVMLVANPSRLEKILLPIFWGLMTLSTFGNLASTTEWLEIVFNIITIT 372
Query: 373 XXXXXXXXXXXNIKVFLNAATSKKQAMQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWA 432
NIKVFLNAATSKKQAMQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWA
Sbjct: 373 GGLILVTMLIGNIKVFLNAATSKKQAMQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWA 432
Query: 433 ATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKG 492
ATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKG
Sbjct: 433 ATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKG 492
Query: 493 EIIVREGDPVQRMLFIVRGHLQSSQVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERL 552
EIIVREGDPVQRMLFIVRGHLQSSQVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERL
Sbjct: 493 EIIVREGDPVQRMLFIVRGHLQSSQVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERL 552
Query: 553 PASSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQL 612
PASSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQL
Sbjct: 553 PASSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQL 612
Query: 613 AWRRYKHRKTLASLSFIXXXXXXXXXXXXGEEKLRLYTAILTSPKPNPNQDDLV 666
AWRRYKHRKTLASLSFI GEEKLRLYTAILTSPKPNPNQDDLV
Sbjct: 613 AWRRYKHRKTLASLSFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNPNQDDLV 666
>Os05g0502000 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 691
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/622 (72%), Positives = 485/622 (77%), Gaps = 12/622 (1%)
Query: 54 WAREWDRAYLLACAAGLMVDPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWN 113
W REW+RAYLLACAAGLMVDPLFLYAVS+SGPLMCVFLDGW AAAVT LRC VDAMHAWN
Sbjct: 69 WVREWNRAYLLACAAGLMVDPLFLYAVSLSGPLMCVFLDGWLAAAVTALRCMVDAMHAWN 128
Query: 114 LLMRLRA--AVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVS-----RKGLMLDM 166
++ +LR A R + + RK L+LD
Sbjct: 129 IVTQLRVSRAGRERACAAGPDEEQPEAEAAAPAPAADADAAASNKLRDHGRYRKWLVLDF 188
Query: 167 FVILPVMQVIVWVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVRLLRRMQNT--YV 224
FVILPVMQV+VWVAAPAMIRAGSTTAVMTV+LV+F+ EYLPKIYH+V LRRMQN ++
Sbjct: 189 FVILPVMQVVVWVAAPAMIRAGSTTAVMTVMLVAFMLEYLPKIYHSVVFLRRMQNQSGHI 248
Query: 225 FGTIWWGIALNLMAYFVAAHAVGACWYLLGAQRATKCLKEQC---AQXXXXXXXXXXXXX 281
FGTIWWGIALNL+AYFVAAHAVGACWYLLG QRATKCLKEQC
Sbjct: 249 FGTIWWGIALNLIAYFVAAHAVGACWYLLGVQRATKCLKEQCLLAGLPACASSTAAVACV 308
Query: 282 XXXXXXXXXXXXXXDRLAWALDASARGTCLDSGDNYQYGAYKWTVMLVANPSRLEKILLP 341
DRLAW +A+AR CL SGDNYQYGAYKWTVMLV+NPSRLEK+LLP
Sbjct: 309 DPLYYGAAVASVGGDRLAWGGNATARNVCLSSGDNYQYGAYKWTVMLVSNPSRLEKMLLP 368
Query: 342 IFWGLMTLSTFGNLASTTEWLEIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQT 401
IFWGLMTLSTFGNL STTEW+EIVFN NIKVFLNA TSKKQAMQT
Sbjct: 369 IFWGLMTLSTFGNLESTTEWVEIVFNIMTITGGLILVTMLIGNIKVFLNATTSKKQAMQT 428
Query: 402 RLRGVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLD 461
RLRG+EWWM+ K +P FR RVRQ ERQRWAATRGVDEC+IVRDLPEGLRRDIKYHLCLD
Sbjct: 429 RLRGLEWWMEHKGVPHGFRQRVRQFERQRWAATRGVDECQIVRDLPEGLRRDIKYHLCLD 488
Query: 462 LVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVLRT 521
LVRQVPLF HMDDLVLENICDRVKSL+FPKGEIIVREGDPVQRMLFIVRGHLQ SQV+R
Sbjct: 489 LVRQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGDPVQRMLFIVRGHLQCSQVMRN 548
Query: 522 GATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQH 581
GATS CTLGPGNFSGDELLSWCMRRPF+ERLPASSSTLVT ESTEAFGLEA DVKYVTQH
Sbjct: 549 GATSWCTLGPGNFSGDELLSWCMRRPFMERLPASSSTLVTAESTEAFGLEAGDVKYVTQH 608
Query: 582 FRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIXXXXXXXXXXXX 641
FRYTFT+D+VRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFI
Sbjct: 609 FRYTFTSDKVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPRRPLSRCSSL 668
Query: 642 GEEKLRLYTAILTSPKPNPNQD 663
GEEKLRLYTAILTSPKPN + D
Sbjct: 669 GEEKLRLYTAILTSPKPNQDDD 690
>Os03g0758300 Similar to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic
nucleotide-and calmodulin-regulated ion channel 2)
(DEFENSE NO DEATH 1)
Length = 618
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/615 (44%), Positives = 377/615 (61%), Gaps = 29/615 (4%)
Query: 56 REWDRAYLLACAAGLMVDPLFLYAVSVS-GPLMCVFLDGWFAAAVTVLRCTVDAMHAWNL 114
+ W+R LLA AA L VDPLF YA+S+ CV++D AAAVT LR D H ++
Sbjct: 18 QRWNRWILLARAAALAVDPLFFYALSIGRAGQPCVYMDAGLAAAVTALRTAADLAHLAHV 77
Query: 115 LMRLRAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPVMQ 174
L++ R A AR S KGL D+FVILP+ Q
Sbjct: 78 LLQFRVAY-------VSRESLVVGCGKLVWDPRAIAAHYAR--SLKGLWFDLFVILPIPQ 128
Query: 175 VIVWVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVRLLRRMQNT--YVFGTIWWGI 232
VI W+ P +IR +MT+LL+ FL ++LPK+YH++ ++R+MQ Y+FGTIWWG
Sbjct: 129 VIFWLVIPKLIREEQIKLIMTMLLLLFLLQFLPKVYHSIYIMRKMQKVTGYIFGTIWWGF 188
Query: 233 ALNLMAYFVAAHAVGACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXXXX 292
LNL AYF+A+H G CWY+L QR CL+E+C
Sbjct: 189 GLNLFAYFIASHIAGGCWYVLAIQRVASCLQEECK-----IKNTCNLTSLACSKEMCFHL 243
Query: 293 XXXDRLAWALDASARG-----TCLDSGDNYQYGAYKWTVMLVANPSRLEKILLPIFWGLM 347
D+ A + ++ G CL + YG YK + ++++ S KIL PIFWGLM
Sbjct: 244 PWSDKNGLACNLTSFGQQNIPDCLSGNGPFAYGIYKGALPVISSNSLAVKILYPIFWGLM 303
Query: 348 TLSTFGN-LASTTEWLEIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQTRLRGV 406
TLSTFGN L T+ WLE++F+ NI+VFL+A ++K+ MQ R R +
Sbjct: 304 TLSTFGNDLEPTSNWLEVIFSIINVLSGLMLFTLLIGNIQVFLHAVLARKRKMQLRFRDM 363
Query: 407 EWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQV 466
EWWM+R++LP R RVR++ER+RWAA G +E +++DLPEGLRRDIK +LCL+LV+QV
Sbjct: 364 EWWMRRRQLPSRLRQRVRKYERERWAAITGDEEMEMIKDLPEGLRRDIKRYLCLELVKQV 423
Query: 467 PLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVLRTGATSC 526
PLF MDDL+L+NICDR++ LVF GE ++REGDPVQRM+F+++G L+S+Q L G +
Sbjct: 424 PLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDPVQRMVFVLQGKLRSTQPLAKGVVAT 483
Query: 527 CTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQHFRYTF 586
C LG GNF GDELLSWC+RRP L+RLPASS+T +E+ +AF L+A D++++T+ FRY F
Sbjct: 484 CMLGAGNFLGDELLSWCLRRPSLDRLPASSATFECVETAQAFCLDAPDLRFITEQFRYKF 543
Query: 587 TNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKT--LASLSFIXXXXXXXXXXXXGEE 644
N++++R+ARYYS WRTWAAV +QLAWRRYK R T LAS + G+
Sbjct: 544 ANEKLKRTARYYSSNWRTWAAVNIQLAWRRYKARTTTDLASAA----QPPSAGGPDDGDR 599
Query: 645 KLRLYTAILTSPKPN 659
+LR Y A+ S +P+
Sbjct: 600 RLRHYAAMFMSLRPH 614
>Os02g0627700 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 686
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 279/575 (48%), Gaps = 34/575 (5%)
Query: 58 WDRAYLLACAAGLMVDPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLLMR 117
W + +L AC A L VDPLFLY MC+ L A ++++R +D +A ++ R
Sbjct: 99 WSKIFLAACLASLFVDPLFLYLTGTRQN-MCIELKYSLAFTLSMIRSLLDLFYAAHIFFR 157
Query: 118 LRAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPVMQVIV 177
R A ++AR D+ LP+ Q ++
Sbjct: 158 FRTAF-----------IAPSSRVFGRGELVIQPCKIARRYLAGTFWFDLVTALPLPQFVI 206
Query: 178 WVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVRLLRR--MQNTYVFGTIWWGIALN 235
W+ P + + +T +L S +F+YLP+++ L R+ M + T W G A N
Sbjct: 207 WIVIPKL-KESATANRKNILRFSIIFQYLPRLFQIFPLSRQIVMATGVMTETAWAGAAYN 265
Query: 236 LMAYFVAAHAVGACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
L+ Y +A+H +GA WYL QR C +E C
Sbjct: 266 LILYMLASHVLGALWYLFSVQRQEACWREAC----------HVEGPSCQTLFFDCKTVSS 315
Query: 296 DRLAWALDASARGTCLDSGDNYQYGAYKWTV-MLVANPSRLEKILLPIFWGLMTLSTFGN 354
+R W ++ C S YQ+G Y + + + S +K +WGL LS G
Sbjct: 316 NRTMWYELSNITSLCTPSNGFYQFGIYGEALDNGLTSSSFTQKYFYCFWWGLKNLSCLGQ 375
Query: 355 LASTTEWL-EIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQTRLRGVEWWMKRK 413
ST+ ++ EI F N++ A + + +T+ +E WM +
Sbjct: 376 NLSTSLFIGEITFATVIGVLGLVLFALLIGNMQ----ATMVRLEEWRTKRTDMERWMNHR 431
Query: 414 KLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMD 473
++PQ + VR++ + +W ATRGVDE ++ DLP +RRDIK HLCLDLVR+VPLF MD
Sbjct: 432 QIPQPLKQCVRRYHQYKWLATRGVDEEALLEDLPMDIRRDIKRHLCLDLVRRVPLFDEMD 491
Query: 474 DLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQS--SQVLRTGATSCCTLGP 531
+ +LE IC+R++ ++ +G +VRE DPV MLFI+RG+L S +Q R+G + C +G
Sbjct: 492 ERMLEAICERLRPALYTRGTRLVRELDPVDSMLFIIRGYLDSYTTQGGRSGFFNSCRIGA 551
Query: 532 GNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRV 591
G F G+ELL W + LP S+ T+ + EAF L A D+++V FR + R+
Sbjct: 552 GEFCGEELLPWALDPRPAASLPLSTRTVRAVSEVEAFALVADDLRFVASQFR-RLHSARI 610
Query: 592 RRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 626
R R+YSH WRTWAA +Q AWRR K R+ L
Sbjct: 611 RHRFRFYSHQWRTWAACFIQAAWRRNKRRRASMEL 645
>Os06g0527100 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 694
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 290/584 (49%), Gaps = 40/584 (6%)
Query: 52 GWWAREWDRAYLLACAAGLMVDPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHA 111
G + + W++ ++L+C + VDPLF Y ++ C +LD +VLR D +
Sbjct: 72 GPFLQSWNKIFVLSCIFAVSVDPLFFYIPVINDNNTCWYLDKKLEITASVLRFFTDIFYI 131
Query: 112 WNLLMRLRAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILP 171
+++ + R +A+ ++D+F +LP
Sbjct: 132 LHIIFQFRTG-----------YIASSLTTFGRGVLVEDRYAIAKRYLSTYFLIDVFAVLP 180
Query: 172 VMQVIVWVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVRLLRRMQNT--YVFGTIW 229
+ QV++ V P + T +L+ + +Y+P++ L ++ + + T W
Sbjct: 181 LPQVVILVVLPNL-GGSEVTKAKNILMFIVICQYVPRLIRIRPLYLQITRSAGVITETPW 239
Query: 230 WGIALNLMAYFVAAHAVGACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXX 289
G LNL+ Y +A+H +GA WYLL +R C ++ C+
Sbjct: 240 AGAVLNLLIYLLASHVLGALWYLLSIERKDACWRDMCSNNSTVCNQAYLYCGDKE----- 294
Query: 290 XXXXXXDRLAWALDASARGTCL--DSGD-NYQYGAYKWTVMLVANPSR-LEKILLPIFWG 345
++ R CL DS D + +G Y + V+ + L K+ ++WG
Sbjct: 295 -------------NSILRTACLPIDSNDIDPNFGIYVPALNNVSQSTNFLAKLFYCVWWG 341
Query: 346 LMTLSTFG-NLASTTEWLEIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQTRLR 404
L LS+ G NL ++T E +F N++ +L +A +++ M+ + R
Sbjct: 342 LQNLSSLGQNLKTSTYAWENLFAVFVSISGLVLFALLIGNVQTYLQSAHLREEEMRVKSR 401
Query: 405 GVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVR 464
+ WM + LP++ + R+R+HE+ RW T GVDE ++ +LP+ LRR IK HLCL L+
Sbjct: 402 DTDQWMSYRLLPENLKERIRRHEKYRWHQTSGVDEELLLMNLPKDLRRAIKRHLCLSLLM 461
Query: 465 QVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQS--SQVLRTG 522
+VP+F++MDD +L +CDR+K +++ +G I+RE DPV MLFI+RG+L S + RTG
Sbjct: 462 RVPMFENMDDQLLNALCDRLKPVLYTEGSCIIREEDPVNEMLFIMRGNLMSMTTNGGRTG 521
Query: 523 ATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQHF 582
+ L G+F G+ELL+W + + LP+S+ T+ TM EAF L A D+K+V F
Sbjct: 522 FFNSDVLKGGDFCGEELLTWALDPTSVSSLPSSTRTVKTMSEVEAFALRAEDLKFVATQF 581
Query: 583 RYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 626
R + +++ + ++YS WRTWAA +Q AW RY +K SL
Sbjct: 582 R-RLHSKQLQHTFKFYSQHWRTWAACFIQAAWHRYCRKKIEDSL 624
>Os12g0163000 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 648
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 278/566 (49%), Gaps = 29/566 (5%)
Query: 69 GLMVDPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLLMRLRAAVRXXXXX 128
GL VDP++ Y + +G CV +D VT +R D + +++++ R A
Sbjct: 3 GLFVDPMYFYLLH-TGLKSCVTMDMQIGVGVTAVRTVADLFYLAHMILKFRTAF------ 55
Query: 129 XXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPVMQVIVWVAAPAMIRAG 188
Q+A + ++D+ +LP+ QV +
Sbjct: 56 -----VAPSSRVFGRGELVRDPDQIAIRYLKNDFIIDLAAMLPIPQVTCIPVNNSSANHT 110
Query: 189 STTAVMTVLLVSFLFEYLPKIYHAVRLLRRM--QNTYVFGTIWWGIALNLMAYFVAAHAV 246
+ T M VL+ +Y+P+++ V L ++ + V T W G A NL+ Y +A+H +
Sbjct: 111 NNTLSMIVLI-----QYIPRVFLIVSLNSKIVKSSGVVTRTAWAGAAYNLLLYTLASHVL 165
Query: 247 GACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLAWALDASA 306
GA WYLL +R C + C + R+ W +
Sbjct: 166 GALWYLLSIERQYTCWMDVCTRENGTNPAIPKCYMSYLDCKTLEDPI---RMDWHSRSEI 222
Query: 307 RGTCLDSGDNYQYGAYKWTVML-VANPSRLEKILLPIFWGLMTLSTFG-NLASTTEWLEI 364
CL Y YG + + L VA + +K L ++WG LS++G NL ++T E
Sbjct: 223 DHQCLLPEATYVYGLFADALNLDVAKVNFWDKYLYCLWWGFRNLSSYGQNLENSTYRGET 282
Query: 365 VFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQTRLRGVEWWMKRKKLPQSFRHRVR 424
+F N++ +L + T + + + + R +E WM+ ++LP + RVR
Sbjct: 283 IFCILICIMGLVFFSHLIGNMQTYLQSMTVRLEEWRVKRRDIEEWMRHRQLPLELQERVR 342
Query: 425 QHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRV 484
+ + +W ATRGVDE I++ LP LRR+I+ HLCL LVR+VP F MD+ +L+ IC+R+
Sbjct: 343 RFFQYKWLATRGVDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERL 402
Query: 485 KSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVL--RTGATSCCTLGPGNFSGDELLSW 542
S + K IVREGDPV MLF++RG L+SS RT S TL PG+F G+ELL+W
Sbjct: 403 VSSLSTKDAYIVREGDPVSEMLFVIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTW 462
Query: 543 C-MRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHG 601
M P L P S+ T+ ++ EAF L A D+KYV F+ + R++ + RYYSH
Sbjct: 463 ALMPNPSLN-FPQSTRTVRSVTEVEAFALRAEDLKYVANQFK-RLHSKRLQHAFRYYSHQ 520
Query: 602 WRTWAAVAVQLAWRRYKHRKTLASLS 627
WR+W A VQ AWRRYK RK LS
Sbjct: 521 WRSWGACFVQGAWRRYKKRKLARELS 546
>Os09g0558300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 713
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 279/588 (47%), Gaps = 43/588 (7%)
Query: 58 WDRAYLLACAAGLMVDPLFLY-----AVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAW 112
W+R +L +C L +DP F Y + S C+ D + +TVLR D +
Sbjct: 79 WNRVFLGSCLFALFIDPFFYYLPLVHVLDESTNRSCIAKDRRLSITITVLRTFADLFYML 138
Query: 113 NLLMRLRAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPV 172
N++++ A ++ R R +D+ +P+
Sbjct: 139 NIMVKFHTAY-----------VDPKSRVLGKGELVLDLKKIQRRYLRTDFFIDLLATIPL 187
Query: 173 MQVIVWVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVRLLRRMQNT--YVFGTIWW 230
QV VW+ P++ + T LV + +Y+ ++Y V L ++ V + W
Sbjct: 188 PQVTVWIIMPSIKNSDYNIRNTTFALV-IMIQYIFRMYLIVPLSNQIIKAAGVVAKSAWL 246
Query: 231 GIALNLMAYFVAAHAVGACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXX 290
G A NL+ Y +A+H GA +YLL +R C +QC
Sbjct: 247 GAAYNLLYYMLASHITGAIYYLLSIERQITCWNQQCLNESCSFNFISCDNTGSSSY---- 302
Query: 291 XXXXXDRLAWALDASARGTCLDSGDN-------YQYGAYKWTVMLVA-NPSRLEKILLPI 342
L W + S C D N + YG + + A + LEK +
Sbjct: 303 -------LTWGKNTSIFDNC-DPNRNSSANPPPFNYGMFSTALSKGAVSAPFLEKYFFCL 354
Query: 343 FWGLMTLSTFGNLASTTEWL-EIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQT 401
+WGL+ LS+ GN T+ ++ E F N++ +L + + + + +
Sbjct: 355 WWGLLQLSSSGNPLQTSAYIAENTFAIAIGALSLVLFAQLIGNMQTYLQSISKRLEEWRL 414
Query: 402 RLRGVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLD 461
R R +E WM+ +LP + RVR+ + +W ATRGV+E I++ LP +RRD++ HLCLD
Sbjct: 415 RQRDMEEWMRHHQLPDELQDRVRRFVQVKWLATRGVEEESILQALPADIRRDVQRHLCLD 474
Query: 462 LVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVL-- 519
LVR+VP F MD +L+ IC+R+ S + P+ I REGDPV MLF++RG L+SS
Sbjct: 475 LVRRVPFFSEMDYQLLDAICERLVSFLCPERTYISREGDPVNEMLFVIRGKLESSTTNGG 534
Query: 520 RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVT 579
R+ + L PG+F+G+ELL+W + P S+ T+ ++ EAF L A D+K+V
Sbjct: 535 RSNFFNSIILRPGDFAGEELLTWALLPKTNVHFPLSTRTVQSLTEVEAFALRAEDLKFVA 594
Query: 580 QHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLS 627
FR + +++ + R+YSH WRTWAA +Q AWR+++ RK SLS
Sbjct: 595 NQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRQHQRRKLAESLS 641
>Os03g0646300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 696
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 299/625 (47%), Gaps = 41/625 (6%)
Query: 59 DRAYLLACAAGLMVDPLFLYA--VSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLLM 116
+R+++++C + VDP+F YA V+ +G +CV + A + +V+R VD A +++
Sbjct: 91 NRSFVVSCIVSIAVDPVFFYAPQVTANGGNLCVGISRDLAISASVVRTVVDLFFAARIVL 150
Query: 117 RLRAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPVMQVI 176
+ R A Q+A R+ D+ +LP+ Q++
Sbjct: 151 QFRTA-----------YIAPSSRVFGRGELVIDTAQIAARYFRRFFAADLLSVLPLPQIV 199
Query: 177 VWVAAPAMIRAGSTTAVMTV---LLVSFLFEYLPK---IYHAVRLLRRMQNTYVFGTIWW 230
+W + AV++ LL+ +Y+P+ IY L+R + + +
Sbjct: 200 IW----KFLHRSKGAAVLSTKDALLIIVFLQYIPRVVRIYPLSSELKRTSGAFA-ESAYA 254
Query: 231 GIALNLMAYFVAAHAVGACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXX 290
G A L+ Y +A+H VGA WYLL +R + C K+ C +
Sbjct: 255 GAAYYLLWYMLASHIVGASWYLLSIERVSDCWKKACNEFPGCNKIYMYCGNDHQKGFLEW 314
Query: 291 XXXXXDRLAWALDASARGTCLDSGDNYQYGAYKWTVM--LVANPSRLEKILLPIFWGLMT 348
+ + D + YG Y V ++ + K+L ++WGL
Sbjct: 315 RTITRQYINETCEPR------DGVMPFNYGIYTPAVRSDVIKSNDFTSKLLYCLWWGLAN 368
Query: 349 LSTFGNLASTTEWL-EIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQTRLRGVE 407
LST G T+ + E +F+ NI+ +L + T + + M+ + R E
Sbjct: 369 LSTLGQGLQTSIYTGEALFSIFLATFGLILMAMLIGNIQTYLQSMTVRLEEMRVKRRDSE 428
Query: 408 WWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVP 467
WM + LPQ R RVR+++ +W TRGVDE +V +LP+ LRRDIK HLCL LVR+VP
Sbjct: 429 QWMHHRLLPQELRERVRRYDAYKWVNTRGVDEEVLVANLPKDLRRDIKRHLCLGLVRRVP 488
Query: 468 LFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQS--SQVLRTGATS 525
LF +MD+ +L+ IC+R++ ++ + I+REGDPV +MLFI+RG L+S + R+G +
Sbjct: 489 LFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLESITTDGGRSGFFN 548
Query: 526 CCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQHFRYT 585
L +F G+ELL+W + LP+S+ T+ + EAF L + ++K+V FR
Sbjct: 549 RSLLEESDFCGEELLTWALDPKAGLSLPSSTRTVRALSEVEAFALHSDELKFVAGQFRRM 608
Query: 586 FTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLAS-----LSFIXXXXXXXXXXX 640
+ +V+ + R+YS WRTWAA +Q AWRR+ R+ + S + +
Sbjct: 609 HSK-QVQHTFRFYSQQWRTWAATYIQAAWRRHLKRRAIRSSTGLKTTMLVSRFAANAMRG 667
Query: 641 XGEEKLRLYTAILTSPKPNPNQDDL 665
++ R +L P P P++ D
Sbjct: 668 VHRQRSRRADEVLMMPMPKPSEPDF 692
>Os02g0773400 Ion transport domain containing protein
Length = 772
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 287/588 (48%), Gaps = 36/588 (6%)
Query: 56 REWDRAYLLACAAGLMVDPLFLYAVSVSGPLMCVFLDGWFAAAVTVLRCTVDAMHAWNLL 115
++W++ ++++C + +DPLF + +SV C+ L+ FA A+ V+R DA++ ++L
Sbjct: 179 QQWNQFFVISCLVAIFIDPLFFFLLSVQKDNKCIVLNWHFATALAVVRSVTDAIYFLHML 238
Query: 116 MRLRAAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVARPVSRKGLMLDMFVILPVMQV 175
++ R A ++A R +LD FV+LP+ QV
Sbjct: 239 LQFRLAY-----------VAPESRVVGAGDLVDEPKKIAVRYLRGYFLLDFFVVLPLPQV 287
Query: 176 IVWVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVRLL----RRMQNTYVFGTIWWG 231
++ + P + + +L ++ L +Y+P+I V LL N ++F + W
Sbjct: 288 MILLVIPKYVGLSTANYAKNLLRITVLLQYVPRIIRFVPLLGGQSDSSANGFIFESAWAN 347
Query: 232 IALNLMAYFVAAHAVGACWYLLGAQRATKCLKEQCAQXXXXXXXXXXXXXXXXXXXXXXX 291
+NL+ + +A H VG+CWYL G QR +CL+ C+
Sbjct: 348 FVINLLMFVLAGHVVGSCWYLFGLQRVNQCLRNACS---ASKIPSCDGFIDCGRGINIGK 404
Query: 292 XXXXDRLAWALDASARGTCLDSGDN-YQYGAYKWTVMLVANPSRLEKILLPIFWGLMTLS 350
R W D SA C D+GDN + YG Y+ V+L + +++ + +FWG +S
Sbjct: 405 QNQLSRQQWFND-SASTACFDTGDNGFHYGIYEQAVLLTTEDNAVKRYIYSLFWGFQQIS 463
Query: 351 TF-GNLASTTEWLEIVFNXXXXXXXXXXXXXXXXNIKVFLNAATSKKQAMQTRLRGVEWW 409
T GNL + E++F N++ FL A ++ MQ R R VE W
Sbjct: 464 TLAGNLVPSYFAWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEQW 523
Query: 410 MKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLF 469
M ++LP+ R RVR+ ER WAAT+GV+E ++ +LPE ++RDI+ H + +V LF
Sbjct: 524 MSHRRLPEDLRRRVRRAERFTWAATQGVNEEELLSNLPEDIQRDIRRHF-FRFLNKVRLF 582
Query: 470 QHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVLRTGATSCCTL 529
MD +L+ ICD+++ ++ G I+ +G PV++M+FIVRG L+S + S L
Sbjct: 583 TLMDWPILDAICDKLRQNLYISGSDILYQGGPVEKMVFIVRGKLESI----SADGSKAPL 638
Query: 530 GPGNFSGDELLSWCMRRPFLERLPA----------SSSTLVTMESTEAFGLEAADVKYVT 579
G+ G+ELL+W + R + T+ + + EAF L A+D++ VT
Sbjct: 639 HEGDVCGEELLTWYLEHSSANRDGGRMRFHGMRLVAIRTVRCLTNVEAFVLRASDLEEVT 698
Query: 580 QHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLS 627
F N RV+ + RY S WRT AA +Q+AWR R A +S
Sbjct: 699 SQFSRFLRNPRVQGAIRYESPYWRTIAATRIQVAWRYRNRRLKRAGMS 746
>Os02g0255000 Similar to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic
nucleotide-and calmodulin-regulated ion channel 1)
Length = 299
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 150/230 (65%), Gaps = 3/230 (1%)
Query: 399 MQTRLRGVEWWMKRKKLPQSFRHRVRQHERQRWAATRGVDECRIVRDLPEGLRRDIKYHL 458
M+ + R E WM + LP + + R+ +HE+ RW TRGVDE ++ +LP+ LRR+IK HL
Sbjct: 1 MRVKRRDTEQWMAHRLLPDNLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHL 60
Query: 459 CLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQS--S 516
CL L+ +VP+F++MD+ +L+ +CDR+K +++ +G I+REGDPV MLFI+RG+L+S +
Sbjct: 61 CLSLLMRVPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTT 120
Query: 517 QVLRTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVK 576
+TG + + G+F G+ELL+W + LP+S+ T+ T+ EAF L A D+K
Sbjct: 121 NGGQTGFFNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLK 180
Query: 577 YVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 626
+V FR + +++ + R+YS WRTWAA +Q AW RY +K +L
Sbjct: 181 FVATQFRRLHSK-QLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTL 229
>Os06g0188000 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 245
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 3/193 (1%)
Query: 437 VDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIV 496
VDE I++ LP LRRDIK HLCLDLV +VP F MD +L+ IC+R+ S + G IV
Sbjct: 1 VDEESILKALPADLRRDIKRHLCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIV 60
Query: 497 REGDPVQRMLFIVRGHLQSSQVL--RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPA 554
REGDPV MLFI+RG L+SS RTG + TL G+F G+ELL W + LP+
Sbjct: 61 REGDPVTEMLFIIRGKLESSTTDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPS 120
Query: 555 SSSTLVTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAW 614
S+ T+ T+ EAF L A D+K+V FR + +++ + RYYSH WRTWAA +Q AW
Sbjct: 121 STRTVKTIVEVEAFALRAEDLKFVASQFRRLHSR-KLQHTFRYYSHHWRTWAACFIQAAW 179
Query: 615 RRYKHRKTLASLS 627
RRYK R+ LS
Sbjct: 180 RRYKRRRLAKDLS 192
>Os04g0643600 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 252
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 442 IVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDP 501
+V+ LP+ LRRDIK HLCL LV++VPLF++MD+ +L+ IC+R++ ++ + E I+REGDP
Sbjct: 3 LVQTLPKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDP 62
Query: 502 VQRMLFIVRGHLQSSQVL--RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTL 559
V M FI+ G L+S R+G + L G F GDELL+W + PAS+ T+
Sbjct: 63 VDEMHFILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTV 122
Query: 560 VTMESTEAFGLEAADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKH 619
+ EAF L A ++K+V FR + +V+ + R+YS WRTWAA +Q AWRRY
Sbjct: 123 KALTEVEAFALCAEELKFVASQFRRLHSR-QVQHTFRFYSQHWRTWAACFIQAAWRRYYK 181
Query: 620 RK 621
RK
Sbjct: 182 RK 183
>Os02g0789100 Cyclic nucleotide-binding domain containing protein
Length = 480
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 118/214 (55%), Gaps = 8/214 (3%)
Query: 456 YHLCLDLV-RQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQ 514
Y++ L ++ VP F MD+ +L+ IC+R+ S + +G IVREGDPV MLFI+RG L+
Sbjct: 247 YNMLLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLE 306
Query: 515 SSQVL--RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEA 572
SS RTG + TL G+F G+ELL W + LP+S+ T+ + EAF L+A
Sbjct: 307 SSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQA 366
Query: 573 ADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIXXX 632
D+K+V FR + R++ + RYYSH WRTWA+ +Q AWRRYK RK LS
Sbjct: 367 EDLKFVANQFR-RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESF 425
Query: 633 XXXXXXXXXGEE----KLRLYTAILTSPKPNPNQ 662
GE+ K L I++ + P
Sbjct: 426 CSMRSDDSNGEDDSPPKQNLAMKIMSGSRKGPQN 459
>Os08g0254600 Cyclic nucleotide-binding domain containing protein
Length = 230
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 465 QVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQSSQVL--RTG 522
QVP F MD +L+ IC+R+ + +G I REGDPV+ MLFI+RG L+SS RTG
Sbjct: 2 QVPFFSAMDHQLLDAICERMTYFLRTEGTYITREGDPVKVMLFIIRGKLESSTTDGGRTG 61
Query: 523 ATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEAADVKYVTQHF 582
+ L PG+F G+ELL+W + + P+S+ T+ T+ EAF L+A D+K V F
Sbjct: 62 FFNSIILKPGDFCGEELLTWALLPSSRDSYPSSTRTVKTIAELEAFSLQADDIKCVASTF 121
Query: 583 RYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASL 626
R + ++ + R +S+ WRTWAA +Q AWRR ++R+ +A +
Sbjct: 122 RMMHSK-HLQHTFRLHSYQWRTWAARFIQSAWRRRQNRQKMAEV 164
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.137 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,806,005
Number of extensions: 673422
Number of successful extensions: 1988
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1949
Number of HSP's successfully gapped: 19
Length of query: 666
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 559
Effective length of database: 11,448,903
Effective search space: 6399936777
Effective search space used: 6399936777
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 159 (65.9 bits)