BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0247300 Os11g0247300|AK102560
(451 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0247300 Alfa-tubulin 862 0.0
Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubu... 846 0.0
Os07g0574800 Tubulin alpha-1 chain 818 0.0
AK106047 802 0.0
Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubu... 780 0.0
AK067478 749 0.0
AK105538 673 0.0
AK109162 361 e-100
Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin) 360 1e-99
Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin) 360 1e-99
Os05g0413200 Beta-tubulin 359 2e-99
Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin) 359 2e-99
Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin) 359 2e-99
Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta su... 353 2e-97
AK110204 347 1e-95
Os06g0671900 Similar to Beta-tubulin 342 4e-94
AK110638 330 1e-90
Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubu... 220 2e-57
Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin) 125 6e-29
>Os11g0247300 Alfa-tubulin
Length = 451
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/432 (96%), Positives = 415/432 (96%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 421 AREDLAALEKDY 432
>Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/432 (94%), Positives = 410/432 (94%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRECISIHIGQAGIQVGNACWELYCLEHGIQ DGQMP D+TVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
RIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
SVVP GDLAKVQRAVCMISNSTSVVEVFSRID KFDLMYSKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 421 AREDLAALEKDY 432
>Os07g0574800 Tubulin alpha-1 chain
Length = 450
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/432 (89%), Positives = 401/432 (92%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE ISIHIGQAGIQVGNACWELYCLEHGI+PDG MP D TVG DAFNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
R+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL+SQ+ISSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGA+NVDV EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSS
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
SVVPGGDLAKVQRAVCMISN+T+V EVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 421 AREDLAALEKDY 432
>AK106047
Length = 451
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/432 (86%), Positives = 402/432 (93%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE +SIHIGQAG+QVGNACWEL+CLEHGIQPDG MP DKT+G DDAFNTFFSETGAGK
Sbjct: 1 MREVLSIHIGQAGVQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGK 60
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRAVF+DLEPTV+DEVRTG YRQLFHPEQLISGKEDAANN+ARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLD 120
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
RIRKLADNCTGLQGF +++AV VDYGKKSKLG+TVYPSPQVST+
Sbjct: 121 RIRKLADNCTGLQGFCIYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYNSVLSTHSLLEHTDVA +LDNEA+YD+CRR+LDIERPTYTNLNRLV QV+SSLTA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAAMLDNEAMYDLCRRNLDIERPTYTNLNRLVGQVVSSLTA 240
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGALNVD+ EFQTNLVPYPRIHF+L+S+APVISAEKAYHEQLSVAEITN+AFEP+S
Sbjct: 241 SLRFDGALNVDITEFQTNLVPYPRIHFVLTSFAPVISAEKAYHEQLSVAEITNAAFEPAS 300
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
M+ KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
Sbjct: 301 MLTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMI+NST++ EVF+RID KFDLMYSKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 421 AREDLAALEKDY 432
>Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 449
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/432 (84%), Positives = 393/432 (90%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MP D T G DAFNTFFSET +GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRA+FVDLEPTVIDEV+TG YRQLFHPEQLIS KEDAANNFARGHYT+G+E+VDLCLD
Sbjct: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
R+RKLADNCTGLQGFLVFNAV VDYG+KSKLGFT+YPSPQ+ST+
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGA+NVD+ EFQTNLVPYPRIHFMLSSYAP+IS EKA+HEQ SV EITNS FEP+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKT+RT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ VPGGDLAKV+RAVCMISN+T+V EVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 421 AREDLAALEKDY 432
>AK067478
Length = 453
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/432 (78%), Positives = 387/432 (89%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRECISIH+GQAG+Q+GN+CWELYCLEH I PDG MP D T+G DD+FNTFFSETGAG+
Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHNITPDGTMPSDTTLGSSDDSFNTFFSETGAGR 60
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRAV+VDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVYVDLEPTVVDEVRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
RIR+L+D CTGLQGFL+F++ VDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQL+V+EITNS FEPS+
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVSEITNSCFEPSN 300
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGFK GINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCM+SN+T++ E ++R+D KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 421 AREDLAALEKDY 432
>AK105538
Length = 449
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/432 (70%), Positives = 366/432 (84%), Gaps = 2/432 (0%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE ISIH+GQAG+Q+G +CW+LYCLEHGIQPDG MP DK GD++F TFFSETG G+
Sbjct: 1 MREVISIHVGQAGVQMGQSCWQLYCLEHGIQPDGTMPSDKQ--PGDESFTTFFSETGTGQ 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
+VPR+V VDLEPTV+DE+RTG YRQLFHP LISGKEDAANN+ARGHYT+GKE VD +D
Sbjct: 59 YVPRSVMVDLEPTVVDEIRTGTYRQLFHPAGLISGKEDAANNYARGHYTVGKENVDTVVD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
R+ K+A+N +GLQGFL FN++ VDYGKK KL F VYP+P+V+T+
Sbjct: 119 RLGKIAENSSGLQGFLFFNSIGGGTGSGFTSLLMERLSVDYGKKMKLQFAVYPAPEVATA 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+VL++H+ +EH+D A ++DNEAIY +C++ LD+ RP+Y NLNRLVSQ +SS+TA
Sbjct: 179 VVEPYNAVLTSHTTMEHSDCAFMVDNEAIYALCQKKLDVPRPSYLNLNRLVSQAVSSITA 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
SLRFDGALNVD+NEFQTNLVPYPRIHF L +YAP+ISAEKA+HE L+V E+TNS FE ++
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLVTYAPIISAEKAHHENLTVGELTNSCFEATN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
M KCDPR GKYMACCL++RGDVVPKDVN A+A IK KR+IQFVDWCPTGFK GINYQPP
Sbjct: 299 QMVKCDPRMGKYMACCLLFRGDVVPKDVNNAIAVIKNKRSIQFVDWCPTGFKVGINYQPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+VVP GDLAKV RAVCM+SN+T++ E ++R++ KFDLMY+KRAFVHWYVGEGMEEGEF+E
Sbjct: 359 TVVPNGDLAKVNRAVCMLSNTTAIAEAWARVNHKFDLMYAKRAFVHWYVGEGMEEGEFTE 418
Query: 421 AREDLAALEKDY 432
AREDLAALEKDY
Sbjct: 419 AREDLAALEKDY 430
>AK109162
Length = 444
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/432 (40%), Positives = 257/432 (59%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +F+E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYFNEATGGK 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A++C LQGF + +++ +Y + F+V PSP+VS +
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MMA CDPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 R--------GLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVSEY 422
>Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin)
Length = 447
Score = 360 bits (924), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 259/435 (59%), Gaps = 16/435 (3%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGD---DAFNTFFSETG 57
MRE + I GQ G Q+G+ WE+ C EHGI P G + VG D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 58 AGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 118 CLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQV 177
LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+V
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Query: 178 STSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
S +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 238 LTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFE 297
+T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
Query: 298 PSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY 357
+MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K +
Sbjct: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355
Query: 358 QPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGE 417
PP + A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 356 IPPR--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
Query: 418 FSEAREDLAALEKDY 432
F+EA ++ L +Y
Sbjct: 408 FTEAESNMNDLVSEY 422
>Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin)
Length = 447
Score = 360 bits (924), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 258/432 (59%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ C EHGI P G+ G+ + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 R--------GLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVSEY 422
>Os05g0413200 Beta-tubulin
Length = 444
Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 171/432 (39%), Positives = 258/432 (59%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G+ WE+ C EHGI P G+ G + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 R--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVSEY 422
>Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin)
Length = 444
Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 259/432 (59%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ C EHG+ G+ GD + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 R--------GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVAEY 422
>Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin)
Length = 447
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 171/432 (39%), Positives = 259/432 (59%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 N--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVAEY 422
>Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)
Length = 446
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/432 (38%), Positives = 254/432 (58%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ C EHG+ P G G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ A + NSTS+ E+F R+ +F M+ ++AF+HWY EGM+E EF+E
Sbjct: 359 --------VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVAEY 422
>AK110204
Length = 447
Score = 347 bits (889), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 249/432 (57%), Gaps = 10/432 (2%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + + GQ G QVG A W+ EHG+ G G + + N +F+E K
Sbjct: 1 MREIVHLQTGQCGNQVGAAFWQTISGEHGLDSSGVYNGTSDLQ--LERMNVYFNEASGNK 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
+VPRAV VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 59 YVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+R+ A+ C LQGF + +++ + + F+V PSP+VS +
Sbjct: 119 VVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREGFPDRMMATFSVLPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN LVS V+S +T
Sbjct: 179 VVEPYNATLSIHQLVENSDATFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTT 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + N+VP+PR+HF + +AP+ S +SV E+T F+P +
Sbjct: 239 CLRFPGQLNSDLRKLAVNMVPFPRLHFFMIGFAPLTSRGAHSFRAVSVPELTQQIFDPKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MMA D R+G+Y+ C +YRG V K+V + ++ K T FV+W P + PP
Sbjct: 299 MMAAADFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVMTALCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ + + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 R--------GLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 411 AESNMNDLVSEY 422
>Os06g0671900 Similar to Beta-tubulin
Length = 433
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/432 (38%), Positives = 252/432 (58%), Gaps = 23/432 (5%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 180
+RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ A I NSTS+ E+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 --------IGLKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
Query: 421 AREDLAALEKDY 432
A ++ L +Y
Sbjct: 398 AESNMNDLVAEY 409
>AK110638
Length = 465
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 259/438 (59%), Gaps = 20/438 (4%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDD----AFNTFFSET 56
MRE I+ GQAG Q+ +A W+ EHG+ DG + +G +D FF +
Sbjct: 1 MRELITFACGQAGNQISSAFWQCILNEHGLDGDG-----RYIGSNEDEQLAKVGVFFEPS 55
Query: 57 GA-GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIV 115
G GK+VPR++ VDLEP +D +R+G +LF P+ I+G+ A NNF++G+YT G E++
Sbjct: 56 GQEGKYVPRSIQVDLEPGTMDTIRSGPLGKLFRPDNYINGESGAGNNFSKGYYTEGAELL 115
Query: 116 DLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSP 175
D LD RK A+ LQGF + +++ ++ + ++V PSP
Sbjct: 116 DQVLDVARKEAEKTDMLQGFQLVHSLGGGTGSGLGTNLLTKLREEFPDRMLATWSVLPSP 175
Query: 176 QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVI 235
+VS +VVEPYN+ LS H L+E++D+ LDNEA+YDIC+R+L + PTY++LN ++S +
Sbjct: 176 KVSDTVVEPYNATLSFHQLVENSDMTFCLDNEALYDICQRTLRTKNPTYSDLNSIISFAM 235
Query: 236 SSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSA 295
S + +LRF G LN D+ + NLVP+PR+HF + +AP+++ ++ L +E+
Sbjct: 236 SGCSTTLRFPGQLNSDLRKMGVNLVPFPRLHFFTTGFAPLVAPGSKAYQSLKTSELIAQG 295
Query: 296 FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGI 355
++P ++MA DPRHGKY+ ++RG+V +DV + ++ K FV+W P +
Sbjct: 296 YDPKNIMAAIDPRHGKYLTVAAIFRGNVNARDVENEMYNLREKNPAGFVEWIPNNVLTSL 355
Query: 356 -NYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGME 414
+ PP +++ + I+N+TS+ E+F R +F LM+ ++AF+HWY GEGM+
Sbjct: 356 CDIAPP---------QLKMSATFIANTTSIQELFKRTHDQFSLMFRRKAFLHWYTGEGMD 406
Query: 415 EGEFSEAREDLAALEKDY 432
E EF+EA +L L +Y
Sbjct: 407 EMEFTEAESNLMDLIAEY 424
>Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)
Length = 469
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 239/446 (53%), Gaps = 25/446 (5%)
Query: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKH 61
RE I+I +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 62 VPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCL 119
+PRA+ VDLEP VI+ ++ +YR L++ E + + A NN+A G++ G+++VD +
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 120 DRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVST 179
D I + AD L+GF++ +++ Y KK ++V+P+ Q+ T
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN-QMET 178
Query: 180 S--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSA 238
Query: 238 LTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYH--EQLSVAEITNSA 295
T +LR+ G +N D+ +L+P PR HF+++ Y P ++ E+ + + +V ++
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRL 297
Query: 296 FEPSSMMAKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTG 350
+ ++M R+ KY++ + +G+V P V+ ++ I+ ++ + F++W P
Sbjct: 298 LQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPAS 357
Query: 351 FKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWY-- 408
+ ++ + P V ++ + M++N TS+ +FS+ +++ + K+AF+ Y
Sbjct: 358 IQVALSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRK 412
Query: 409 --VGEGMEEGEFSEAREDLAALEKDY 432
+ E + EF E+RE + +L +Y
Sbjct: 413 FPMFEDNDLSEFDESREIIESLVDEY 438
>Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin)
Length = 133
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Query: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQ--LERVNVYYNEASCGR 58
Query: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 121 RIRKLADNCTGLQG 134
+RK A+NC LQG
Sbjct: 119 VVRKEAENCDCLQG 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,261,178
Number of extensions: 592235
Number of successful extensions: 1164
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1120
Number of HSP's successfully gapped: 19
Length of query: 451
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 347
Effective length of database: 11,605,545
Effective search space: 4027124115
Effective search space used: 4027124115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)