Os03g0726100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tubulin alpha-1 chain (Alpha-1 tubulin).
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Os03g0726100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tubulin alpha-1 chain (Alpha-1 tubulin).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.24 | 0.41 | 14.4 | -0.356 | 0.285 | -0.276 | -0.17 | -0.835 | 0.0771 | 17.4 | 1.1 | 11 | -- | -- |
| 76.83 | 0.408 | 14.4 | -0.395 | 0.299 | -0.361 | -0.274 | -- | 0.073 | 17.5 | 1.103 | 25 | -- | -- |
| 75.99 | 0.409 | 14.4 | -0.337 | 0.268 | -0.207 | -- | -0.887 | 0.0784 | 17.4 | 1.137 | 5 | -- | -- |
| 76.88 | 0.408 | 14.4 | -0.39 | 0.3 | -0.316 | -- | -- | 0.0745 | 17.3 | 1.112 | 4 | -- | -- |
| 79.13 | 0.414 | 14.4 | -0.278 | -- | 0.16 | -- | -0.615 | 0.0873 | -- | 2.1 | 9 | -- | -- |
| 79.78 | 0.419 | 14.4 | -0.358 | 0.197 | -- | -0.34 | -- | 0.0612 | 18.1 | -- | -- | -- | -- |
| 80.05 | 0.419 | 14.4 | -0.354 | 0.195 | -- | -- | -- | 0.0601 | 17.9 | -- | -- | -- | -- |
| 78.69 | 0.413 | 14.4 | -0.323 | -- | 0.216 | -- | -- | 0.0493 | -- | 4.3 | 88 | -- | -- |
| 80.89 | 0.419 | 14.4 | -- | 0.292 | -0.278 | -- | -- | 0.114 | 17.3 | 1.147 | 4 | -- | -- |
| 82.03 | 0.423 | 14.4 | -0.36 | -- | -- | -- | -- | 0.0556 | -- | -- | -- | -- | -- |
| 83.36 | 0.427 | 14.4 | -- | 0.201 | -- | -- | -- | 0.0996 | 17.8 | -- | -- | -- | -- |
| 80.49 | 0.418 | 14.4 | -- | -- | 0.352 | -- | -- | 0.0899 | -- | 4.805 | 78 | -- | -- |
| 85.45 | 0.431 | 14.4 | -- | -- | -- | -- | -- | 0.0955 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.92 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 72.04 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 3 | 72.15 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 4 | 72.22 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 6 | 72.88 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 7 | 72.97 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 8 | 73.02 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 10 | 73.24 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 13 | 73.27 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 35 | 73.56 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 39 | 73.67 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 40 | 73.67 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 49 | 73.72 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 52 | 73.72 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 55 | 73.72 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 56 | 73.72 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 58 | 73.72 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 63 | 73.72 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 65 | 73.73 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 73 | 73.82 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 76 | 73.93 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 91 | 74.00 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 112 | 74.17 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 11 | 12 |
| 117 | 74.30 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 120 | 74.34 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 9 |
| 129 | 74.47 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 137 | 74.47 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 9 |
| 143 | 74.51 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 144 | 74.51 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 146 | 74.52 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 148 | 74.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 151 | 74.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 155 | 74.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 164 | 74.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 165 | 74.52 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 166 | 74.52 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 176 | 74.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 179 | 74.54 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 10 |
| 182 | 74.57 | wind | 5.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 188 | 74.61 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 192 | 74.63 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 7 |
| 196 | 74.65 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 209 | 74.67 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 210 | 74.67 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 213 | 74.68 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 14 |
| 214 | 74.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 222 | 74.76 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 15 |
| 223 | 74.76 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 225 | 74.77 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 227 | 74.78 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 234 | 74.81 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 263 | 74.85 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 266 | 74.87 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 6 |
| 269 | 74.88 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 278 | 74.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 288 | 74.95 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 6 |
| 293 | 74.97 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 14 |
| 306 | 74.99 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 307 | 75.00 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 308 | 75.00 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 321 | 75.04 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 11 | 7 |
| 322 | 75.04 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 323 | 75.05 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 330 | 75.07 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 10 |
| 350 | 75.10 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 12 |
| 354 | 75.11 | wind | 3.0 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 362 | 75.13 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 384 | 75.14 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 413 | 75.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 420 | 75.23 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 17 |
| 428 | 75.25 | wind | 1.0 | 30 | > th | dose independent | sin | 7 | NA |
| 452 | 75.28 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 8 |
| 460 | 75.29 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 461 | 75.29 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 8 |
| 476 | 75.31 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 8 |
| 479 | 75.32 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 483 | 75.32 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 501 | 75.35 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 523 | 75.38 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 529 | 75.38 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 532 | 75.39 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 547 | 75.41 | wind | 1.0 | 30 | < th | dose independent | sin | 5 | NA |
| 561 | 75.42 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 9 |
| 566 | 75.42 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 11 | 19 |
| 601 | 75.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 19 | 16 |
| 660 | 75.50 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 661 | 75.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 678 | 75.52 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 689 | 75.54 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 692 | 75.54 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 694 | 75.54 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 698 | 75.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 727 | 75.58 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 728 | 75.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 740 | 75.60 | wind | 5.0 | 720 | > th | dose independent | rect. | 8 | 6 |
| 742 | 75.60 | wind | 9.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 749 | 75.61 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 801 | 75.63 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 21 |
| 816 | 75.65 | humidity | 90.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 833 | 75.67 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 23 |
| 838 | 75.67 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 14 |
| 841 | 75.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 849 | 75.68 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 851 | 75.69 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 863 | 75.70 | temperature | 25.0 | 10 | < th | dose independent | sin | 5 | NA |
| 864 | 75.70 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 871 | 75.70 | atmosphere | 1005.0 | 270 | > th | dose dependent | sin | 21 | NA |
| 874 | 75.70 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 890 | 75.72 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 901 | 75.73 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 18 |
| 902 | 75.73 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 905 | 75.73 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 908 | 75.74 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 928 | 75.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 933 | 75.75 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 19 |
| 934 | 75.75 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 19 |
| 942 | 75.76 | humidity | 70.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 970 | 75.78 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 971 | 75.78 | wind | 1.0 | 10 | > th | dose independent | rect. | 15 | 20 |
| 978 | 75.79 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 991 | 75.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 994 | 75.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 3 |