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Os03g0661300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.78 (0.0557) R2 : 0.458
β1 : -3.1 (0.197) R2dD : 0.314 R2D : 0.209
β2 : 6.21 (0.527) R2dC : 2.42 R2C : -1.94
β3 : -7.34 (0.668) R2dE : 2.1 R2E : -2.25
β4 : 3.14 (0.622) R2dD*C : 0.0301 R2D*C : 0.0241
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.449 (0.114) R2dN8 : 0.025 R2N8 : -0.01
σ : 0.997
deviance : 458.1
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_____
C
peak time of C : 6.96
E
wheather : humidity
threshold : 70
memory length : 834
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 6.49
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
458.92 1.01 9.78 -3.07 6.07 -7.1 6.04 -3.68 -0.433 6.61 71 802 6.62 --
458.1 0.997 9.78 -3.1 6.21 -7.34 3.14 -- -0.449 6.96 70 834 6.49 --
461.49 1 9.78 -3.16 6.88 -8.08 -- 3.63 -0.433 6.88 70.15 815 6.39 --
477.54 1.02 9.78 -3.02 5.55 -6.87 -- -- -0.459 7.52 71 953 7.02 --
613.83 1.16 9.97 -2.75 -- 0.272 -- 1.78 -0.59 -- 79 2853 1.61 --
581.28 1.13 9.95 -2.86 0.622 -- 3.52 -- -0.587 6.48 -- -- -- --
612.02 1.16 9.96 -2.81 0.637 -- -- -- -0.598 6.77 -- -- -- --
596.92 1.14 9.94 -3.12 -- 0.619 -- -- -0.577 -- 78 36445 2.26 --
719.52 1.25 9.74 -- 5.24 -6.46 -- -- -0.227 7.78 71.05 937 6.56 --
633.23 1.18 9.97 -2.79 -- -- -- -- -0.585 -- -- -- -- --
819.7 1.34 9.89 -- 0.605 -- -- -- -0.285 7.05 -- -- -- --
731.58 1.26 9.94 -- -- 1.39 -- -- -0.278 -- 96 36607 9.88 --
838.97 1.35 9.9 -- -- -- -- -- -0.275 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 462.51 temperature 30 720 > th dose dependent rect. 18 1
16 468.03 humidity 50 1440 < th dose independent rect. 16 1
17 468.25 humidity 50 1440 < th dose dependent rect. 16 1
18 468.31 humidity 70 720 > th dose independent sin 12 NA
33 468.87 temperature 30 720 > th dose independent rect. 18 1
47 469.12 humidity 70 720 > th dose independent rect. 17 14
48 469.39 humidity 70 720 < th dose dependent rect. 18 1
62 470.15 humidity 70 720 > th dose independent rect. 18 8
64 471.06 humidity 70 720 < th dose independent rect. 17 15
66 471.10 humidity 70 720 < th dose independent rect. 17 3
118 472.57 humidity 50 1440 > th dose independent rect. 16 1
227 477.05 humidity 60 1440 > th dose independent rect. 16 3
228 477.07 humidity 60 1440 > th dose independent rect. 17 11
277 477.48 humidity 70 1440 < th dose dependent sin 12 NA
319 478.23 humidity 70 720 < th dose independent sin 12 NA
320 478.40 radiation 20 1440 > th dose independent rect. 16 16
370 479.74 temperature 30 720 < th dose independent rect. 17 8
407 480.43 radiation 20 1440 > th dose dependent rect. 16 16
431 480.66 temperature 30 1440 > th dose dependent sin 12 NA
535 481.85 temperature 30 1440 < th dose independent rect. 18 2
589 483.12 temperature 30 720 < th dose independent rect. 17 15
597 483.26 temperature 30 1440 < th dose independent rect. 18 6
618 483.41 temperature 30 1440 < th dose independent rect. 18 10
721 484.72 radiation 1 720 > th dose independent rect. 18 11
747 485.12 radiation 1 720 > th dose dependent rect. 18 1
828 485.47 radiation 1 720 > th dose independent rect. 18 1
935 486.35 radiation 30 1440 > th dose independent rect. 7 1
970 487.11 radiation 30 1440 < th dose independent rect. 22 10