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Os07g0574800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Tubulin alpha-1 chain.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0218) R2 : 0.399
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.943 (0.0564) R2dC : 0.37 R2C : 0.353
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.238 (0.0458) R2dN8 : 0.046 R2N8 : 0.0288
σ : 0.411
deviance : 77.09
__
_____
C
peak time of C : 16.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.68 0.366 13.1 -1.1 0.988 1.15 -0.378 -6.08 0.138 16.3 28.1 1205 -- --
64.21 0.373 12.9 0.138 1.01 0.48 -0.231 -- 0.325 16.4 29.13 1163 -- --
61.06 0.364 13.1 -1.11 0.987 1.15 -- -6.06 0.141 16.3 28.15 1213 -- --
63.77 0.372 12.9 0.142 0.992 0.523 -- -- 0.371 16.4 32.23 1070 -- --
83.83 0.426 13.1 -0.654 -- 1.4 -- -5.29 -0.0759 -- 24.69 413 -- --
74.63 0.405 13 0.273 0.951 -- -0.449 -- 0.271 16.7 -- -- -- --
75.16 0.406 13 0.271 0.948 -- -- -- 0.268 16.6 -- -- -- --
94.11 0.452 13 0.0759 -- 0.978 -- -- 0.15 -- 24.91 401 -- --
64.33 0.374 12.9 -- 1.01 0.521 -- -- 0.348 16.4 31.98 1087 -- --
122.91 0.518 12.9 0.235 -- -- -- -- 0.243 -- -- -- -- --
77.09 0.411 13 -- 0.943 -- -- -- 0.238 16.6 -- -- -- --
94.19 0.452 13 -- -- 1.01 -- -- 0.165 -- 25 413 -- --
124.36 0.521 13 -- -- -- -- -- 0.217 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 58.45 radiation 30 14400 < th dose independent rect. 16 11
3 58.49 radiation 30 14400 < th dose independent rect. 16 9
6 58.67 radiation 30 14400 < th dose independent rect. 16 1
9 58.90 radiation 30 14400 < th dose independent rect. 16 7
15 59.14 humidity 70 720 > th dose independent rect. 17 12
16 59.52 humidity 70 720 > th dose independent rect. 15 14
18 59.60 humidity 70 720 > th dose independent rect. 17 3
21 59.76 humidity 70 720 > th dose independent rect. 18 10
23 59.80 humidity 70 720 > th dose independent rect. 15 6
29 59.90 humidity 70 720 > th dose independent sin 13 NA
40 60.23 radiation 1 270 < th dose dependent rect. 5 22
41 60.26 wind 1 43200 > th dose dependent rect. 11 3
43 60.29 wind 9 43200 < th dose dependent rect. 11 3
44 60.31 temperature 30 720 > th dose dependent rect. 18 1
58 60.35 humidity 80 720 < th dose dependent rect. 17 15
61 60.47 wind 1 43200 > th dose dependent rect. 12 1
62 60.50 radiation 1 720 > th dose dependent rect. 18 11
63 60.51 wind 9 43200 < th dose dependent rect. 12 1
64 60.51 humidity 80 720 < th dose dependent rect. 18 1
68 60.59 radiation 10 14400 > th dose independent rect. 5 1
90 60.80 temperature 30 720 < th dose independent rect. 17 4
98 60.87 humidity 50 1440 < th dose independent rect. 16 1
100 60.92 temperature 30 720 < th dose independent rect. 17 10
101 60.92 humidity 50 1440 < th dose dependent rect. 16 1
104 60.93 humidity 80 720 < th dose dependent rect. 17 8
109 60.96 wind 7 14400 > th dose dependent rect. 5 9
111 60.98 temperature 30 720 < th dose independent rect. 17 12
116 61.02 wind 7 14400 < th dose independent rect. 11 2
118 61.03 temperature 30 720 < th dose independent rect. 17 14
120 61.04 wind 7 14400 > th dose independent rect. 11 2
121 61.07 wind 3 43200 > th dose independent rect. 11 2
137 61.15 humidity 70 720 < th dose independent sin 12 NA
146 61.18 humidity 50 720 > th dose dependent rect. 17 4
147 61.18 wind 7 14400 > th dose dependent rect. 9 5
149 61.21 radiation 1 270 < th dose independent rect. 5 22
151 61.23 radiation 1 270 < th dose dependent sin 16 NA
157 61.26 wind 3 43200 < th dose independent rect. 11 1
161 61.28 temperature 30 720 < th dose independent rect. 17 8
176 61.35 humidity 70 720 < th dose independent rect. 18 13
182 61.38 humidity 70 720 < th dose independent rect. 18 2
198 61.40 wind 9 14400 < th dose independent rect. 22 17
205 61.44 radiation 1 720 > th dose dependent rect. 18 1
222 61.46 wind 7 14400 > th dose dependent rect. 24 15
255 61.57 wind 9 14400 < th dose independent rect. 3 12
266 61.60 wind 7 14400 > th dose independent rect. 10 4
298 61.62 wind 9 14400 > th dose independent rect. 19 20
302 61.64 wind 9 14400 > th dose dependent rect. 18 21
307 61.67 wind 7 14400 < th dose independent rect. 10 4
311 61.69 wind 7 14400 > th dose independent rect. 5 9
320 61.75 wind 3 43200 > th dose independent rect. 9 5
326 61.80 temperature 30 720 > th dose independent rect. 18 1
364 61.87 wind 5 43200 < th dose independent rect. 10 6
365 61.87 humidity 70 720 < th dose independent rect. 15 16
366 61.87 wind 9 14400 > th dose independent rect. 22 17
371 61.88 humidity 80 14400 > th dose independent rect. 3 1
374 61.89 humidity 70 720 < th dose independent rect. 15 5
381 61.89 radiation 1 720 > th dose independent rect. 18 11
388 61.89 radiation 1 270 < th dose dependent rect. 9 18
389 61.90 wind 3 43200 < th dose independent rect. 9 4
392 61.90 wind 9 14400 < th dose independent rect. 19 20
393 61.90 radiation 1 1440 < th dose dependent rect. 18 9
395 61.92 humidity 50 1440 > th dose independent rect. 16 1
402 61.92 radiation 1 1440 < th dose dependent rect. 18 7
410 61.95 radiation 1 270 < th dose independent sin 15 NA
424 62.00 radiation 40 14400 > th dose dependent rect. 15 17
489 62.11 radiation 1 1440 < th dose dependent rect. 18 5
499 62.13 radiation 1 1440 < th dose dependent rect. 18 1
518 62.20 humidity 80 43200 < th dose dependent rect. 22 1
531 62.24 wind 5 43200 > th dose dependent rect. 15 1
533 62.25 radiation 1 720 > th dose independent rect. 18 1
551 62.27 radiation 1 270 > th dose independent sin 15 NA
568 62.28 humidity 80 720 < th dose dependent sin 12 NA
573 62.29 wind 3 43200 > th dose dependent rect. 3 14
577 62.30 wind 7 14400 > th dose dependent sin 4 NA
590 62.32 wind 9 14400 > th dose independent rect. 3 12
599 62.33 temperature 25 270 > th dose independent rect. 13 6
616 62.35 radiation 1 270 < th dose independent rect. 9 18
688 62.46 radiation 30 14400 > th dose dependent rect. 16 1
718 62.48 humidity 70 14400 < th dose dependent rect. 17 15
727 62.50 humidity 80 14400 < th dose independent rect. 23 1
763 62.54 wind 3 43200 > th dose dependent sin 0 NA
787 62.58 radiation 20 14400 < th dose dependent rect. 22 7
817 62.62 wind 9 14400 < th dose independent sin 6 NA
836 62.62 humidity 70 14400 < th dose dependent rect. 17 5
855 62.64 humidity 80 14400 < th dose independent rect. 3 1
920 62.69 humidity 70 14400 < th dose independent rect. 18 14
930 62.70 wind 5 43200 < th dose independent sin 23 NA
991 62.73 wind 9 43200 < th dose dependent rect. 3 14