BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0158600 Os11g0158600|Os11g0158600
(678 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0158600 POX domain containing protein 804 0.0
Os12g0636200 Similar to Prep (Fragment) 273 3e-73
Os03g0680800 Similar to Prep (Fragment) 273 4e-73
Os03g0165300 Similar to Prep (Fragment) 267 2e-71
Os10g0534900 Similar to Prep (Fragment) 240 3e-63
Os06g0108900 POX domain containing protein 239 6e-63
Os03g0124000 POX domain containing protein 224 2e-58
Os01g0848400 Acid phosphatase/vanadium-dependent haloperoxi... 202 9e-52
Os05g0455200 Similar to Homeodomain protein JUBEL2 199 5e-51
Os03g0732100 Similar to Homeodomain protein JUBEL1 189 8e-48
Os12g0160500 Similar to BEL1-related homeotic protein 5 150 2e-36
Os02g0226600 POX domain containing protein 147 3e-35
Os03g0680700 Similar to Knotted1-interacting protein 139 7e-33
Os06g0562300 POX domain containing protein 133 6e-31
AK064665 128 1e-29
>Os11g0158600 POX domain containing protein
Length = 678
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/678 (63%), Positives = 432/678 (63%)
Query: 1 MAAYYHGGAGTDIQSGTDGLQTLYLMNPSYXXXXXXXXXXXXXXXXXNMMLLNSAVTSMT 60
MAAYYHGGAGTDIQSGTDGLQTLYLMNPSY NMMLLNSAVTSMT
Sbjct: 1 MAAYYHGGAGTDIQSGTDGLQTLYLMNPSYAGYGDAAAAAAAPGAAANMMLLNSAVTSMT 60
Query: 61 PVSFGXXXXXXXXXXXXXFVGIPLQAPPASGYNLWTPAAATGAGDMSPPTPXXXXXXXXX 120
PVSFG FVGIPLQAPPASGYNLWTPAAATGAGDMSPPTP
Sbjct: 61 PVSFGHQPSPSSSSAAQHFVGIPLQAPPASGYNLWTPAAATGAGDMSPPTPQHQHQQAHG 120
Query: 121 XXXXXXXXXXXXXXREXXXXXXXXXXXXXGDEGKYLQAVAQGAASHGQMVMSSKYLKAAQ 180
RE GDEGKYLQAVAQGAASHGQMVMSSKYLKAAQ
Sbjct: 121 GGAAGVSAVLSLSSREAAPPVTVAAVVAAGDEGKYLQAVAQGAASHGQMVMSSKYLKAAQ 180
Query: 181 ELLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMS 240
ELLDE MS
Sbjct: 181 ELLDEVVSVSKGVDDVKAAAAAKSPASVKKKEDSEGVSGGGTEDGGGAKSGGAPPPPEMS 240
Query: 241 TAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTIS 300
TAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTIS
Sbjct: 241 TAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTIS 300
Query: 301 RQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGMMQS 360
RQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDH GMMQS
Sbjct: 301 RQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHQLRQQRALQQLGMMQS 360
Query: 361 SAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL 420
SAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL
Sbjct: 361 SAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRL 420
Query: 421 WKPMVEEMYLEETKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMDSKAAHME 480
WKPMVEEMYLEETKDQ KMDSKAAHME
Sbjct: 421 WKPMVEEMYLEETKDQDGGGGAGAGDEGSKPGGSKGGGAGVNGGVVDSAAKMDSKAAHME 480
Query: 481 SGGGVHPSLLELAGDHQXXXXXXXXXXXXXXXXXXXXXXXXXXRTEEQQQAAFHVSDVAT 540
SGGGVHPSLLELAGDHQ RTEEQQQAAFHVSDVAT
Sbjct: 481 SGGGVHPSLLELAGDHQAQAGFYDDDDEDGGAAAALQQKLKKARTEEQQQAAFHVSDVAT 540
Query: 541 LXXXXXXXXXXRHDEVSHRELLMKFMESXXXXXXXXXXXXXXXXXXXXXXXYSLFAPAPY 600
L RHDEVSHRELLMKFMES YSLFAPAPY
Sbjct: 541 LHAHAAAAAAARHDEVSHRELLMKFMESGSAGAGAGAAARDHHHEHHGGVGYSLFAPAPY 600
Query: 601 GQFATEQFAFAXXXXXXXXXXVSLTLGLPHGAEQTASFLMTSSNXXXXXXXXXXXXXYDM 660
GQFATEQFAFA VSLTLGLPHGAEQTASFLMTSSN YDM
Sbjct: 601 GQFATEQFAFAGHGGGGGGGGVSLTLGLPHGAEQTASFLMTSSNGSDGAGHVAGGGGYDM 660
Query: 661 NMQSTKSFAAQLMRDFVA 678
NMQSTKSFAAQLMRDFVA
Sbjct: 661 NMQSTKSFAAQLMRDFVA 678
>Os12g0636200 Similar to Prep (Fragment)
Length = 647
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 168/266 (63%), Gaps = 5/266 (1%)
Query: 170 VMSSKYLKAAQELLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 229
+ +S+YLKAAQELLDE
Sbjct: 200 IRNSRYLKAAQELLDEVVSVWKSIKQKAQKEKVESGKADGKETDGGPKSEGVSSNPQESG 259
Query: 230 XXXXXXXXXMSTAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSAR 289
+STAE+QELQ K KL+ MLDEV+++Y+ Y+ QMQ VV+SF+ VAG GSA+
Sbjct: 260 ANAAPE---LSTAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVVAGPGSAK 316
Query: 290 TYTALALRTISRQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXX 349
YTA+AL+TISR FRCL+DAI Q+ + LGE ++ G G+ +RLRYID
Sbjct: 317 PYTAVALQTISRHFRCLKDAINDQINVIRKKLGEEENSSGKEGKL--TRLRYIDQQLRQQ 374
Query: 350 XXXXXXGMMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQV 409
GM+ +AWRPQRGLPE SV+ILRAWLFEHFLHPYPKDS+K+MLA+QTGLTRSQ+
Sbjct: 375 RAFQQYGMIPQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQI 434
Query: 410 SNWFINARVRLWKPMVEEMYLEETKD 435
SNWFINARVRLWKPM+E+MY EE D
Sbjct: 435 SNWFINARVRLWKPMIEDMYKEEIGD 460
>Os03g0680800 Similar to Prep (Fragment)
Length = 675
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/265 (50%), Positives = 168/265 (63%), Gaps = 5/265 (1%)
Query: 168 QMVMSSKYLKAAQELLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 227
Q + +SKYLKAAQELLDE
Sbjct: 192 QAIRNSKYLKAAQELLDEVVSVWKSIKQKAQKDQAEAGKSDNKEAEGGSKGEGVSSNPQE 251
Query: 228 XXXXXXXXXXXMSTAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGS 287
+S AE+QELQ K KL+ MLDEV+++Y+ Y+ QMQ+VV+SF+ VAG G+
Sbjct: 252 STANAAPE---ISAAEKQELQNKMAKLMAMLDEVDRKYKHYYHQMQIVVSSFDMVAGSGA 308
Query: 288 ARTYTALALRTISRQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXX 347
A+ YTA+AL+TIS+ FRCL+DAI Q+ + LGE + G G+ +RLRYID
Sbjct: 309 AKPYTAVALQTISKHFRCLKDAINDQINVIRKKLGEEESSSGKEGKL--TRLRYIDQQLR 366
Query: 348 XXXXXXXXGMMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRS 407
G++Q +AWRPQRGLPE SVSILRAWLFEHFLHPYPKDS+K+MLA+QTGLTRS
Sbjct: 367 QQRAFQQYGLLQQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLARQTGLTRS 426
Query: 408 QVSNWFINARVRLWKPMVEEMYLEE 432
Q+SNWFINARVRLWKPM+E+MY EE
Sbjct: 427 QISNWFINARVRLWKPMIEDMYKEE 451
>Os03g0165300 Similar to Prep (Fragment)
Length = 600
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 152/197 (77%), Gaps = 6/197 (3%)
Query: 239 MSTAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRT 298
+S +ERQ+LQ K L+ MLD+V++RYR YH QMQ+V++SF+AVAGGG+AR YTALAL+T
Sbjct: 209 LSPSERQDLQNKVTALMAMLDQVDRRYRHYHHQMQIVMSSFDAVAGGGAARPYTALALQT 268
Query: 299 ISRQFRCLRDAIAGQVRAASRALGEA-VDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGM 357
ISR FR LRDAI Q +AA R LGE A GG G SRLRYID GM
Sbjct: 269 ISRHFRSLRDAIGAQAQAARRGLGEQDASAQGGGGL---SRLRYIDQQLRQQRAMQQFGM 325
Query: 358 MQSS--AWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFIN 415
MQ AWRPQRGLPE +VS+LRAWLFEHFLHPYPKDS+K+MLA+QTGL+R QVSNWFIN
Sbjct: 326 MQQPQHAWRPQRGLPESAVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFIN 385
Query: 416 ARVRLWKPMVEEMYLEE 432
ARVRLWKPM+EEMY EE
Sbjct: 386 ARVRLWKPMIEEMYKEE 402
>Os10g0534900 Similar to Prep (Fragment)
Length = 586
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
Query: 246 ELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTISRQFRC 305
ELQ KGKL ML+EV++RYR+Y +QM+ + ASFEAVAG +A +YT LA RTISR FR
Sbjct: 209 ELQRLKGKLYTMLEEVDRRYRRYCEQMRALAASFEAVAGERAAASYTRLASRTISRHFRS 268
Query: 306 LRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGMMQSSAWRP 365
LRD + Q++A + LGE A G + RLR +D GM++S WRP
Sbjct: 269 LRDGVVAQLQAVRKQLGEKDTAVPGMTKGETPRLRVLD-QCLRQHKAYQAGMLESHPWRP 327
Query: 366 QRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMV 425
QRGLPER+VSILRAWLFEHFLHPYP D DK +LA+QTGL+RSQV+NWFINARVRLWKPMV
Sbjct: 328 QRGLPERAVSILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVANWFINARVRLWKPMV 387
Query: 426 EEMYLEETKDQ 436
EEMY EE KD+
Sbjct: 388 EEMYAEEMKDE 398
>Os06g0108900 POX domain containing protein
Length = 530
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 150/206 (72%), Gaps = 8/206 (3%)
Query: 239 MSTAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRT 298
+S+ + +L+ +K ++++M++EV++RYR+Y +QM+ V SFEAVAGGG+A+ YT LA+R
Sbjct: 163 LSSMDLLDLERRKARILSMVEEVDRRYRRYREQMRAVEVSFEAVAGGGAAQVYTKLAMRA 222
Query: 299 ISRQFRCLRDAIAGQVRAASRALGEA------VDADGGCGRTVGS--RLRYIDHXXXXXX 350
+SR FRCLRDA+ GQVRA A+GE+ A G T G RLR +D
Sbjct: 223 MSRHFRCLRDALVGQVRALRNAMGESQRDAAGGVAAAAPGATKGDTPRLRVLDQCLRQQR 282
Query: 351 XXXXXGMMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVS 410
G + S WRPQRGLPER+V++LRAWLFEHFLHPYP D DK +LA+QTGL+RSQVS
Sbjct: 283 AFQQSGAVDSFPWRPQRGLPERAVAVLRAWLFEHFLHPYPNDVDKHILARQTGLSRSQVS 342
Query: 411 NWFINARVRLWKPMVEEMYLEETKDQ 436
NWFINARVRLWKPM+E+MY EETK +
Sbjct: 343 NWFINARVRLWKPMIEDMYKEETKPE 368
>Os03g0124000 POX domain containing protein
Length = 591
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 136/192 (70%)
Query: 243 ERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTISRQ 302
E ELQ K KL ML+EV++RYR+Y +QM+ V FEAVAG +A YTA+A RTISR
Sbjct: 205 EALELQRLKDKLYIMLEEVDRRYRRYCEQMRAVAGGFEAVAGERAAGAYTAVAARTISRH 264
Query: 303 FRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGMMQSSA 362
FR LRD I Q++AA +ALGE + G R RLR ID M S
Sbjct: 265 FRSLRDGIVAQLQAARKALGEKDVSAAGTTRGQTPRLRVIDQCIRHHKSLQGVAAMDSHP 324
Query: 363 WRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWK 422
WRPQRGLP+R+V+ILRAWLFEHFLHPYP D DK +LA+QTGL+RSQVSNWFINARVRLWK
Sbjct: 325 WRPQRGLPDRAVTILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWK 384
Query: 423 PMVEEMYLEETK 434
PMVEEMY+EE K
Sbjct: 385 PMVEEMYVEEMK 396
>Os01g0848400 Acid phosphatase/vanadium-dependent haloperoxidase family protein
Length = 612
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 125/189 (66%), Gaps = 1/189 (0%)
Query: 246 ELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTISRQFRC 305
E Q KK KLI+M++EV +RYRQY+QQ+Q V+ASFE VAG +A + ALALR +++ F+C
Sbjct: 255 EQQWKKTKLISMMEEVCKRYRQYYQQVQAVMASFETVAGFSNAAPFAALALRAMAKHFKC 314
Query: 306 LRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGMMQSSAWRP 365
L+ I Q+R S + + + G + WRP
Sbjct: 315 LKSMILNQLRNTSNKVAVKDGLNKEIAVFGLAGGSSGGAGLQRANSASAFGQPHN-IWRP 373
Query: 366 QRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMV 425
QRGLPER+VS+LRAWLFEHFLHPYP D DK MLAKQTGLTR+QVSNWFINARVRLWKPMV
Sbjct: 374 QRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMV 433
Query: 426 EEMYLEETK 434
EE++ E +
Sbjct: 434 EEIHNLEMR 442
>Os05g0455200 Similar to Homeodomain protein JUBEL2
Length = 580
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 131/195 (67%), Gaps = 6/195 (3%)
Query: 241 TAERQELQMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTIS 300
T E Q +K +LI+++++V +RYRQY+QQ+Q VV+SFE VAG +A + ++ALRT+S
Sbjct: 221 TVSGAEQQWRKTRLISLMEDVCKRYRQYYQQLQAVVSSFETVAGLSNAAPFASMALRTMS 280
Query: 301 RQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGMMQS 360
+ F+ L+ I Q+R G+ DG G+ + + Q
Sbjct: 281 KHFKYLKGIILNQLRNT----GKGATKDG-LGKEDTTNFGLMGGGAGLLRGNNVNSFSQP 335
Query: 361 -SAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 419
+ WRPQRGLPER+VS+LRAWLFEHFLHPYP DSDK MLAKQTGLTR+QVSNWFINARVR
Sbjct: 336 HNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVR 395
Query: 420 LWKPMVEEMYLEETK 434
LWKPMVEE++ E +
Sbjct: 396 LWKPMVEEIHNLEMR 410
>Os03g0732100 Similar to Homeodomain protein JUBEL1
Length = 631
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 125/196 (63%), Gaps = 21/196 (10%)
Query: 239 MSTAERQELQMKKGKLINMLDE------------------VEQRYRQYHQQMQVVVASFE 280
+S A+R E Q KK KLI+MLDE V++RY Y QMQ+VV F+
Sbjct: 437 LSPADRFEHQRKKAKLISMLDEARVIRVASLPGEKVFYMGVDRRYNHYCDQMQMVVNFFD 496
Query: 281 AVAGGGSARTYTALALRTISRQFRCLRDAIAGQVRAASRALGEAVDADGGCGRTVGS--R 338
+V G G+A YTALA + +SR FRCL+DAIA Q+R ALGE DA G G T G R
Sbjct: 497 SVMGFGAATPYTALAQKAMSRHFRCLKDAIAAQLRGTCEALGEK-DAGTGSGLTKGETPR 555
Query: 339 LRYIDHXXXXXXXXXXXGMMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIML 398
LR ID G+M+ AWRPQRGLPERSV+ILR+WLFEHFLHPYP D+DK +L
Sbjct: 556 LRAIDQSLRQQRAFHHMGIMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLL 615
Query: 399 AKQTGLTRSQVSNWFI 414
A+QTGL+R+Q+ + I
Sbjct: 616 ARQTGLSRNQMHIYVI 631
>Os12g0160500 Similar to BEL1-related homeotic protein 5
Length = 417
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 64/68 (94%), Positives = 67/68 (98%)
Query: 362 AWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLW 421
WRPQRGLPER+VS+LRAWLFEHFLHPYPKDSDK+MLAKQTGLTRSQVSNWFINARVRLW
Sbjct: 116 GWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLW 175
Query: 422 KPMVEEMY 429
KPMVEEMY
Sbjct: 176 KPMVEEMY 183
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 556 VSHRELLMKFMESXXXXXXX--XXXXXXXXXXXXXXXXYSLFAPAPYGQFATEQFAFAXX 613
VSHRELLMKF E+ YSLF A YG
Sbjct: 292 VSHRELLMKFTEAGGEGVRTGHPHVNDDDDDVPGGAGGYSLFTAAQYGHQFGSDHFAFAG 351
Query: 614 XXXXXXXXVSLTLGLPHGAEQT-ASFLMTSSNXXXXXXXXXXXXXYDMNMQSTKSFAAQL 672
VSLTLGLPHGA+QT ASFL+ + YDMNMQSTKS AAQL
Sbjct: 352 HGGGGGGGVSLTLGLPHGADQTPASFLIGAGAGSDGGGAPVTTAGYDMNMQSTKSLAAQL 411
Query: 673 MRDFVA 678
MRDFVA
Sbjct: 412 MRDFVA 417
>Os02g0226600 POX domain containing protein
Length = 539
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 114/198 (57%), Gaps = 14/198 (7%)
Query: 248 QMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAV-------AGGGSARTYTALALRTIS 300
Q + +L+ ML ++Q+Y Q ++Q A F + AG S+ A R +S
Sbjct: 321 QRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVS 380
Query: 301 RQFRCLRDAIAGQVRAASRALGEAV-DADGGCGRTVGSRLRYIDHXXXX---XXXXXXXG 356
+ LR IAG++ +A+ A G + T G R R + G
Sbjct: 381 AMYHGLRRRIAGEIMSAAAAAGRPCRGGESSSAVTGGERERSWESAFIQKHWAVQQLRRG 440
Query: 357 MMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINA 416
Q WRPQRGLPE+SV++L+AW+FE+FL PYPKDS+K MLA ++GL+R+QVSNWFINA
Sbjct: 441 EQQ--CWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINA 498
Query: 417 RVRLWKPMVEEMYLEETK 434
RVRLWKPM+EEM EE K
Sbjct: 499 RVRLWKPMIEEM-CEELK 515
>Os03g0680700 Similar to Knotted1-interacting protein
Length = 346
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 104/184 (56%), Gaps = 23/184 (12%)
Query: 264 RYRQYHQQMQVVVASFEAVAGGGSARTYTALALRTISRQFRCLRDAI------------- 310
R+ Y +++ V ASFE G G+ YTAL + +S F LR AI
Sbjct: 154 RHEHYFGELRRVSASFEPALGAGATAGYTALMAQAMSHHFGSLRRAILRKLRLHAAAAAR 213
Query: 311 --AGQVRAASRALGEAVDADGGCGRTVGSRLRYIDHXXXXXXXXXXXGMMQSSAWRPQRG 368
+ +R A A+ E + DG V +R+ AWRP RG
Sbjct: 214 TRSALLRLARDAMEEDDEGDGEEEEEVVNRV--------VRRTKQAAAARAEQAWRPLRG 265
Query: 369 LPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEM 428
LPE +V +LRAWLF+HFLHPYP D++K+MLA TGL+R+Q+SNWFINARVRLWKPMVEEM
Sbjct: 266 LPEDAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWKPMVEEM 325
Query: 429 YLEE 432
Y +E
Sbjct: 326 YNDE 329
>Os06g0562300 POX domain containing protein
Length = 545
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 67/73 (91%)
Query: 362 AWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLW 421
+WRPQRGLPE+SV++L+AW+FE+FL PYPKDS+K MLA ++GL+RSQVSNWFINARVRLW
Sbjct: 449 SWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
Query: 422 KPMVEEMYLEETK 434
KPM+E+MY E K
Sbjct: 509 KPMIEDMYEELKK 521
>AK064665
Length = 188
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 63/70 (90%)
Query: 363 WRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWK 422
WRP RGLPE +V +LRAWLF+HFLHPYP D++K+MLA TGL+R+Q+SNWFINARVRLWK
Sbjct: 102 WRPLRGLPEDAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWK 161
Query: 423 PMVEEMYLEE 432
PMVEEMY +E
Sbjct: 162 PMVEEMYNDE 171
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,072,154
Number of extensions: 390317
Number of successful extensions: 1262
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1242
Number of HSP's successfully gapped: 17
Length of query: 678
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 570
Effective length of database: 11,396,689
Effective search space: 6496112730
Effective search space used: 6496112730
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)