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Os11g0158600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : POX domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.9 (0.0225) R2 : 0.781
β1 : 1.36 (0.0824) R2dD : 0.137 R2D : 0.1
β2 : 2.17 (0.0587) R2dC : 0.657 R2C : 0.629
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.383 (0.048) R2dN8 : 0.0408 R2N8 : -0.0032
σ : 0.423
deviance : 81.55
__
_____
C
peak time of C : 18
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.45 0.389 14.9 1.43 2.13 -0.625 0.554 0.649 0.371 19.1 9.651 109 -- --
70.47 0.391 14.9 1.42 2.11 -0.667 0.866 -- 0.366 19.2 9.558 120 -- --
69.19 0.387 14.9 1.43 2.14 -0.636 -- 0.736 0.375 19.1 9.72 109 -- --
71.67 0.394 14.9 1.37 2.06 -0.69 -- -- 0.363 19.2 9.34 151 -- --
90.89 0.444 14.9 1.24 -- -2.6 -- 0.704 0.237 -- 2.27 707 -- --
80.89 0.422 14.9 1.37 2.17 -- 0.528 -- 0.38 18 -- -- -- --
81.55 0.423 14.9 1.36 2.17 -- -- -- 0.383 18 -- -- -- --
90.38 0.443 14.9 1.24 -- -2.59 -- -- 0.243 -- 2.27 706 -- --
118.21 0.506 15 -- 1.91 -0.679 -- -- 0.203 19.1 10.22 209 -- --
325.35 0.843 14.9 1.3 -- -- -- -- 0.333 -- -- -- -- --
130.64 0.535 15 -- 2.15 -- -- -- 0.231 18 -- -- -- --
121.88 0.514 14.9 -- -- -2.66 -- -- 0.188 -- 0.05979 734 -- --
369.96 0.898 14.9 -- -- -- -- -- 0.189 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.50 radiation 20.0 270 < th dose independent rect. 15 14
2 60.77 radiation 40.0 270 < th dose dependent rect. 15 14
3 60.83 atmosphere 1005.0 90 > th dose independent rect. 3 4
6 61.41 atmosphere 1000.0 90 > th dose dependent rect. 2 5
7 61.52 wind 9.0 90 < th dose independent rect. 7 10
12 61.96 atmosphere 1000.0 270 > th dose dependent rect. 2 3
14 62.10 atmosphere 995.0 90 > th dose independent rect. 17 14
16 62.15 temperature 10.0 90 > th dose independent rect. 7 10
17 62.15 atmosphere 1015.0 90 < th dose independent rect. 7 10
18 62.15 temperature 10.0 90 > th dose independent rect. 17 14
19 62.15 radiation 40.0 90 < th dose independent rect. 17 14
22 62.23 precipitation 0.1 90 < th dose independent rect. 7 10
23 62.23 precipitation 0.1 90 < th dose dependent rect. 7 10
26 62.28 wind 9.0 30 < th dose dependent rect. 17 14
27 62.28 temperature 10.0 30 > th dose dependent rect. 17 14
30 62.35 wind 9.0 90 < th dose independent rect. 17 14
32 62.41 temperature 20.0 30 > th dose dependent rect. 4 3
33 62.44 temperature 25.0 720 > th dose dependent rect. 19 3
51 62.60 humidity 50.0 90 > th dose independent rect. 17 14
56 62.73 atmosphere 995.0 30 > th dose independent rect. 7 10
57 62.75 temperature 20.0 10 > th dose dependent rect. 2 5
65 62.86 temperature 25.0 720 > th dose independent rect. 19 3
68 62.89 radiation 40.0 90 < th dose dependent rect. 17 14
78 63.05 atmosphere 1015.0 30 < th dose independent rect. 17 14
82 63.16 precipitation 0.1 10 < th dose independent rect. 17 14
83 63.16 precipitation 0.1 10 < th dose dependent rect. 17 14
85 63.19 temperature 25.0 720 > th dose dependent rect. 19 11
94 63.29 temperature 25.0 720 > th dose dependent rect. 19 7
117 63.49 temperature 30.0 90 < th dose independent rect. 17 14
120 63.50 wind 1.0 30 > th dose independent rect. 7 10
145 63.72 temperature 10.0 720 > th dose dependent rect. 19 1
150 63.74 wind 9.0 270 < th dose independent rect. 5 11
193 64.30 humidity 50.0 90 > th dose independent rect. 7 10
195 64.31 temperature 10.0 1440 > th dose independent rect. 8 10
198 64.31 temperature 10.0 1440 > th dose independent rect. 18 14
201 64.31 humidity 50.0 1440 > th dose independent rect. 18 14
219 64.53 radiation 1.0 30 > th dose independent rect. 7 10
223 64.56 temperature 10.0 270 > th dose independent rect. 5 11
224 64.56 atmosphere 1015.0 270 < th dose independent rect. 5 11
237 64.67 precipitation 0.1 270 < th dose independent rect. 5 11
238 64.67 precipitation 0.1 270 < th dose dependent rect. 5 11
278 64.98 atmosphere 995.0 30 > th dose dependent rect. 17 14
285 65.04 temperature 20.0 10 > th dose dependent rect. 20 11
288 65.06 temperature 10.0 30 > th dose dependent rect. 19 12
306 65.18 atmosphere 1015.0 270 < th dose independent rect. 1 20
317 65.28 humidity 50.0 270 > th dose dependent rect. 23 1
320 65.30 temperature 10.0 270 > th dose independent rect. 21 4
321 65.30 temperature 30.0 270 < th dose independent rect. 21 4
322 65.30 humidity 50.0 270 > th dose independent rect. 21 4
325 65.30 atmosphere 995.0 270 > th dose independent rect. 21 4
326 65.30 radiation 1.0 270 < th dose independent rect. 21 4
333 65.30 temperature 10.0 270 > th dose independent rect. 1 20
334 65.30 radiation 1.0 270 < th dose dependent rect. 21 4
340 65.31 wind 9.0 270 < th dose independent rect. 21 4
348 65.33 temperature 25.0 720 > th dose independent rect. 18 12
350 65.34 wind 7.0 270 < th dose independent rect. 23 1
353 65.35 temperature 10.0 270 > th dose independent rect. 23 1
354 65.35 temperature 30.0 270 < th dose independent rect. 23 1
355 65.35 humidity 50.0 270 > th dose independent rect. 23 1
358 65.35 atmosphere 995.0 270 > th dose independent rect. 23 1
359 65.35 radiation 1.0 270 < th dose independent rect. 23 1
365 65.35 temperature 10.0 270 > th dose independent rect. 24 23
366 65.35 radiation 1.0 270 < th dose dependent rect. 23 1
376 65.40 precipitation 0.1 270 < th dose independent rect. 23 1
378 65.40 precipitation 0.1 270 < th dose dependent rect. 23 1
384 65.41 precipitation 0.1 270 < th dose independent rect. 1 20
385 65.41 precipitation 0.1 270 < th dose dependent rect. 1 20
386 65.42 precipitation 0.1 270 < th dose independent rect. 21 4
387 65.42 precipitation 0.1 270 < th dose dependent rect. 21 4
391 65.43 radiation 10.0 270 < th dose dependent rect. 24 21
412 65.53 atmosphere 995.0 270 > th dose independent rect. 5 11
422 65.57 wind 3.0 30 < th dose independent rect. 4 3
446 65.67 radiation 10.0 90 < th dose independent rect. 2 21
455 65.70 humidity 50.0 270 > th dose dependent rect. 21 4
484 65.78 wind 7.0 90 < th dose dependent rect. 3 4
519 65.90 wind 9.0 270 < th dose independent rect. 1 20
526 65.92 wind 5.0 720 < th dose independent rect. 7 1
528 65.92 temperature 20.0 30 > th dose independent rect. 4 3
546 65.93 radiation 10.0 270 < th dose independent rect. 24 21
550 65.96 radiation 10.0 90 < th dose independent rect. 3 19
571 65.98 temperature 10.0 30 > th dose dependent rect. 7 10
593 66.07 atmosphere 995.0 30 > th dose dependent rect. 7 10
594 66.08 wind 1.0 270 > th dose independent rect. 21 3
595 66.08 precipitation 0.1 10 < th dose independent rect. 4 19
596 66.08 precipitation 0.1 10 < th dose dependent rect. 4 19
606 66.16 precipitation 0.1 90 < th dose independent rect. 7 20
608 66.16 precipitation 0.1 90 < th dose dependent rect. 7 20
610 66.17 temperature 25.0 720 < th dose independent rect. 19 12
613 66.17 humidity 50.0 90 > th dose dependent rect. 17 14
620 66.21 wind 9.0 10 < th dose independent rect. 23 5
622 66.21 temperature 10.0 10 > th dose independent rect. 23 5
624 66.21 temperature 30.0 10 < th dose independent rect. 23 5
626 66.21 humidity 50.0 10 > th dose independent rect. 23 5
632 66.21 atmosphere 995.0 10 > th dose independent rect. 23 5
634 66.21 radiation 1.0 10 < th dose independent rect. 23 5
644 66.21 radiation 1.0 90 > th dose independent rect. 7 12
651 66.21 temperature 10.0 10 > th dose independent rect. 4 19
655 66.21 atmosphere 1015.0 10 < th dose independent rect. 4 19
661 66.21 radiation 1.0 10 < th dose dependent rect. 23 5
671 66.22 precipitation 0.1 90 < th dose independent rect. 3 4
675 66.22 precipitation 0.1 90 < th dose dependent rect. 3 4
700 66.29 atmosphere 995.0 270 > th dose independent rect. 1 19
701 66.29 wind 9.0 90 < th dose independent rect. 7 20
707 66.31 temperature 25.0 720 < th dose independent rect. 20 10
737 66.36 radiation 20.0 14400 < th dose dependent rect. 24 3
771 66.41 precipitation 0.1 10 < th dose independent rect. 2 21
776 66.41 precipitation 0.1 10 < th dose dependent rect. 2 21
811 66.54 radiation 10.0 10 < th dose independent rect. 4 3
815 66.55 wind 9.0 30 < th dose independent rect. 4 19
822 66.58 humidity 50.0 10 > th dose dependent rect. 23 5
871 66.65 wind 5.0 90 < th dose independent rect. 15 16
884 66.70 temperature 10.0 90 > th dose independent rect. 3 4
886 66.70 temperature 30.0 90 < th dose independent rect. 3 4
887 66.70 humidity 50.0 90 > th dose independent rect. 3 4
890 66.70 atmosphere 1015.0 90 < th dose independent rect. 3 4
891 66.70 radiation 30.0 90 < th dose independent rect. 3 4
894 66.70 temperature 10.0 90 > th dose independent rect. 7 20
953 66.85 wind 9.0 1440 < th dose independent rect. 24 3
965 66.86 wind 9.0 270 < th dose dependent rect. 1 19
974 66.88 atmosphere 995.0 10 > th dose independent rect. 4 19