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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0562300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : POX domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.92 (0.0183) R2 : 0.000217
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0122 (0.0386) R2dN8 : 0.000281 R2N8 : 0.000217
σ : 0.345
deviance : 54.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.46 0.337 2.93 -0.113 0.0601 -0.407 0.0704 1.22 0.0448 9.55 0.1986 600 -- --
52.76 0.338 2.92 -0.0869 0.0665 -0.268 -0.0656 -- 0.0273 9.39 0.1995 600 -- --
51.47 0.334 2.93 -0.111 0.0608 -0.408 -- 1.18 0.0446 9 0.2 600 -- --
52.78 0.338 2.91 -0.0873 0.0619 -0.271 -- -- 0.0368 9.03 0.09223 600 -- --
51.65 0.335 2.93 -0.116 -- -0.443 -- 1.18 0.05 -- 0.1 600 -- --
53.93 0.344 2.92 -0.0304 0.12 -- -0.0507 -- 0.0075 8.47 -- -- -- --
53.94 0.344 2.92 -0.0318 0.12 -- -- -- 0.00762 8.61 -- -- -- --
52.97 0.339 2.92 -0.0922 -- -0.312 -- -- 0.0423 -- 0.1905 600 -- --
52.96 0.339 2.91 -- 0.0667 -0.246 -- -- 0.0436 8.92 0.1835 600 -- --
54.74 0.346 2.92 -0.0314 -- -- -- -- 0.00868 -- -- -- -- --
53.97 0.344 2.92 -- 0.119 -- -- -- 0.0112 8.63 -- -- -- --
53.18 0.34 2.91 -- -- -0.286 -- -- 0.0482 -- 0.1 600 -- --
54.77 0.345 2.92 -- -- -- -- -- 0.0122 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.99 temperature 25.0 30 > th dose independent rect. 7 1
3 45.10 radiation 10.0 30 > th dose independent rect. 7 1
4 45.51 humidity 80.0 10 < th dose independent rect. 1 7
6 45.52 humidity 80.0 10 < th dose independent rect. 5 3
11 45.58 humidity 80.0 10 < th dose independent rect. 7 1
14 45.94 temperature 25.0 10 > th dose dependent rect. 7 1
58 48.65 wind 3.0 10 < th dose dependent rect. 7 1
59 48.68 wind 7.0 4320 > th dose independent rect. 1 1
64 48.68 wind 7.0 4320 > th dose dependent rect. 1 1
73 49.40 humidity 80.0 270 < th dose independent rect. 7 1
74 49.43 wind 1.0 720 < th dose dependent rect. 22 1
77 49.64 atmosphere 1005.0 30 > th dose independent rect. 7 1
78 49.64 radiation 20.0 10 < th dose independent rect. 7 1
80 49.72 wind 3.0 10 < th dose independent rect. 7 1
83 49.93 wind 9.0 4320 > th dose independent rect. 19 1
84 49.93 wind 9.0 4320 > th dose dependent rect. 19 1
86 49.98 wind 1.0 720 < th dose independent rect. 22 1
94 50.19 wind 1.0 720 < th dose dependent rect. 15 8
116 50.63 radiation 10.0 10 > th dose independent sin 11 NA
123 50.80 humidity 70.0 30 > th dose independent rect. 7 1
132 50.87 humidity 80.0 270 < th dose independent rect. 23 9
133 50.88 humidity 80.0 270 < th dose independent rect. 1 7
145 50.98 wind 1.0 30 > th dose independent rect. 7 1
150 51.00 atmosphere 1015.0 10 < th dose dependent rect. 7 1
158 51.06 wind 1.0 720 < th dose dependent rect. 2 1
179 51.23 wind 1.0 720 < th dose dependent sin 18 NA
180 51.23 wind 3.0 30 < th dose dependent rect. 2 1
182 51.23 wind 1.0 720 < th dose dependent rect. 14 14
183 51.24 wind 1.0 30 < th dose independent rect. 2 1
204 51.25 atmosphere 1005.0 30 > th dose dependent rect. 2 1
208 51.26 temperature 10.0 30 > th dose dependent rect. 2 1
215 51.27 temperature 10.0 30 > th dose independent rect. 2 1
217 51.27 temperature 25.0 30 < th dose independent rect. 2 1
219 51.27 humidity 50.0 30 > th dose independent rect. 2 1
222 51.27 atmosphere 995.0 30 > th dose independent rect. 2 1
223 51.27 atmosphere 1010.0 30 < th dose independent rect. 2 1
225 51.27 radiation 1.0 30 < th dose independent rect. 2 1
230 51.27 precipitation 0.1 30 < th dose independent rect. 2 1
231 51.27 temperature 10.0 30 > th dose independent rect. 3 23
233 51.27 atmosphere 995.0 30 > th dose dependent rect. 2 1
235 51.27 radiation 1.0 30 < th dose dependent rect. 2 1
240 51.27 precipitation 0.1 30 < th dose dependent rect. 2 1
241 51.27 wind 1.0 720 < th dose dependent rect. 9 19
242 51.28 humidity 50.0 30 > th dose dependent rect. 2 1
253 51.31 wind 1.0 720 < th dose dependent rect. 21 7
261 51.32 wind 9.0 1440 < th dose independent rect. 8 1
264 51.32 temperature 10.0 30 > th dose independent rect. 7 1
266 51.32 temperature 10.0 1440 > th dose independent rect. 8 1
271 51.32 temperature 30.0 30 < th dose independent rect. 7 1
273 51.32 humidity 50.0 30 > th dose independent rect. 7 1
275 51.32 humidity 50.0 1440 > th dose independent rect. 8 1
277 51.32 atmosphere 995.0 30 > th dose independent rect. 7 1
278 51.32 atmosphere 995.0 1440 > th dose independent rect. 8 1
281 51.32 atmosphere 1015.0 30 < th dose independent rect. 7 1
282 51.32 atmosphere 1015.0 1440 < th dose independent rect. 8 1
283 51.32 precipitation 0.1 30 < th dose independent rect. 7 1
284 51.32 temperature 10.0 30 > th dose independent rect. 8 23
285 51.32 temperature 10.0 1440 > th dose independent rect. 9 23
288 51.32 humidity 90.0 10 < th dose dependent rect. 7 1
289 51.32 atmosphere 1015.0 30 < th dose dependent rect. 2 1
290 51.32 precipitation 0.1 30 < th dose dependent rect. 7 1
305 51.35 wind 1.0 720 < th dose independent rect. 15 12
308 51.35 atmosphere 995.0 30 > th dose independent rect. 8 23
315 51.37 precipitation 0.1 30 < th dose independent rect. 8 23
316 51.37 temperature 30.0 30 < th dose dependent rect. 2 1
317 51.37 precipitation 0.1 30 < th dose dependent rect. 8 23
318 51.38 wind 1.0 1440 > th dose independent rect. 22 1
320 51.38 wind 1.0 720 < th dose independent rect. 15 8
328 51.40 wind 9.0 10 < th dose independent rect. 8 23
336 51.42 wind 9.0 1440 > th dose dependent rect. 9 1
348 51.43 wind 1.0 720 > th dose independent rect. 8 21
349 51.44 wind 1.0 720 < th dose independent rect. 21 6
354 51.45 precipitation 0.1 1440 < th dose independent rect. 8 1
355 51.45 wind 1.0 720 > th dose independent rect. 18 9
360 51.45 precipitation 0.1 1440 < th dose dependent rect. 8 1
363 51.46 wind 9.0 30 < th dose independent rect. 3 23
373 51.49 wind 3.0 10 > th dose dependent rect. 8 1
376 51.50 wind 1.0 720 > th dose independent sin 17 NA
379 51.50 radiation 40.0 30 < th dose dependent rect. 7 1
383 51.52 wind 1.0 720 < th dose independent sin 17 NA
384 51.52 wind 7.0 4320 < th dose independent rect. 1 1
411 51.60 wind 1.0 30 > th dose independent rect. 2 1
425 51.63 wind 1.0 720 < th dose independent rect. 1 2
426 51.63 wind 1.0 720 > th dose independent rect. 13 15
462 51.67 wind 1.0 10 > th dose independent rect. 8 23
519 51.73 wind 9.0 1440 > th dose independent rect. 9 1
547 51.77 humidity 50.0 30 > th dose independent rect. 8 23
558 51.79 atmosphere 1000.0 10 < th dose independent rect. 7 1
569 51.79 atmosphere 1000.0 10 < th dose dependent rect. 7 1
594 51.83 humidity 70.0 1440 < th dose dependent rect. 8 1
597 51.83 humidity 90.0 30 < th dose dependent rect. 3 5
605 51.86 humidity 60.0 4320 < th dose independent rect. 8 1
623 51.86 humidity 90.0 30 < th dose dependent rect. 5 3
637 51.87 humidity 60.0 270 < th dose independent rect. 8 1
664 51.87 humidity 60.0 270 < th dose dependent rect. 8 1
740 51.89 wind 9.0 4320 < th dose independent rect. 24 8
748 51.89 humidity 60.0 90 < th dose independent rect. 18 15
756 51.89 humidity 60.0 90 < th dose dependent rect. 18 15
762 51.90 humidity 60.0 30 < th dose independent rect. 9 1
810 51.90 humidity 60.0 10 < th dose dependent rect. 9 1
815 51.90 atmosphere 995.0 30 > th dose dependent rect. 7 1
960 51.91 wind 1.0 10 < th dose dependent rect. 9 1
970 51.92 wind 1.0 10 < th dose independent rect. 9 3
983 51.93 wind 1.0 10 < th dose independent rect. 9 1