BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0562300 Os06g0562300|Os06g0562300
(545 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32980.1 | chr4:15914865-15916873 REVERSE LENGTH=474 172 5e-43
AT4G36870.1 | chr4:17369423-17373723 FORWARD LENGTH=740 131 8e-31
AT2G16400.1 | chr2:7101490-7103200 REVERSE LENGTH=483 130 1e-30
AT1G19700.1 | chr1:6809958-6811854 REVERSE LENGTH=539 129 4e-30
AT4G34610.1 | chr4:16530546-16532498 REVERSE LENGTH=533 129 4e-30
AT2G23760.1 | chr2:10107951-10112736 REVERSE LENGTH=628 129 6e-30
AT1G75410.1 | chr1:28300095-28301890 REVERSE LENGTH=525 127 1e-29
AT2G27990.1 | chr2:11921540-11923902 REVERSE LENGTH=585 127 2e-29
AT5G41410.1 | chr5:16580424-16583770 FORWARD LENGTH=612 124 1e-28
AT2G27220.2 | chr2:11637306-11639507 REVERSE LENGTH=440 124 2e-28
AT2G35940.1 | chr2:15089171-15091699 REVERSE LENGTH=681 120 1e-27
AT1G75430.1 | chr1:28308121-28309517 REVERSE LENGTH=291 119 5e-27
AT5G02030.1 | chr5:395754-398872 FORWARD LENGTH=576 115 6e-26
AT5G25220.1 | chr5:8736208-8738115 FORWARD LENGTH=432 54 2e-07
AT4G08150.1 | chr4:5147969-5150610 REVERSE LENGTH=399 54 2e-07
AT1G23380.2 | chr1:8297499-8302492 REVERSE LENGTH=330 53 4e-07
AT1G62990.1 | chr1:23337468-23340348 FORWARD LENGTH=292 52 9e-07
AT1G62360.1 | chr1:23058796-23061722 REVERSE LENGTH=383 52 1e-06
AT5G11060.1 | chr5:3510408-3512967 FORWARD LENGTH=394 51 1e-06
AT1G70510.1 | chr1:26576635-26582145 FORWARD LENGTH=311 51 2e-06
AT4G32040.1 | chr4:15494127-15496009 FORWARD LENGTH=384 50 2e-06
>AT4G32980.1 | chr4:15914865-15916873 REVERSE LENGTH=474
Length = 473
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 142/271 (52%), Gaps = 36/271 (13%)
Query: 263 FSQVVSRSAVLAHVAQELLNGFVACLLQXXXXXXXXXXXXXXXXQALSSGFSARITT--- 319
FSQ++ S L H QE+L+ F A L A SS F++R
Sbjct: 198 FSQLIFGSKYL-HSVQEILSHFAAYSLDYSSRGTESG--------AASSAFTSRFENITE 248
Query: 320 -----APTEDASPGSGGARWAAEAQR--LRKLLQLVDEKCNQCVEEMQSTAARFNSMVR- 371
+ +A GS R A EA++ L LLQ+VD++ + CV+E+ + + F++
Sbjct: 249 FLDGDSNNSEAGFGSTFQRRALEAKKTHLLDLLQMVDDRYSHCVDEIHTVISAFHAATEL 308
Query: 372 -STXXXXXXLTXXXXXXXXXXXXXXXXXXXMGQLVXXXXXXXXXXXXXXXLEEKERSWES 430
L MG ++ K+++ E+
Sbjct: 309 DPQLHTRFALQTVSFLYKNLRERICKKIISMGSVLERG---------------KDKTQET 353
Query: 431 SFIQKHWAMQQLRRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSG 490
S +H +QQL+R + Q WRPQRGLPEKSV+VL+ WMF+NFL PYPKDSEK +LA RSG
Sbjct: 354 SMFHQHCLLQQLKRKNHQIWRPQRGLPEKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSG 413
Query: 491 LSRSQVSNWFINARVRLWKPMIEDMYEELKK 521
L+RSQVSNWFINARVRLWKPMIE+MY E+ K
Sbjct: 414 LTRSQVSNWFINARVRLWKPMIEEMYAEMNK 444
>AT4G36870.1 | chr4:17369423-17373723 FORWARD LENGTH=740
Length = 739
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 75/86 (87%)
Query: 433 IQKHWAMQQLRRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLS 492
++++ A Q+ +Q++WRPQRGLPE+SV +L+AW+FE+FL PYP D++K +LA ++GLS
Sbjct: 482 LRQNRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLS 541
Query: 493 RSQVSNWFINARVRLWKPMIEDMYEE 518
R+QVSNWFINARVRLWKPM+E+MY++
Sbjct: 542 RNQVSNWFINARVRLWKPMVEEMYQQ 567
>AT2G16400.1 | chr2:7101490-7103200 REVERSE LENGTH=483
Length = 482
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 433 IQKHWAMQQLRRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLS 492
+++ A+Q+L +WRPQRGLP+ SV VL+AW+FE+FL PYPKDS+K MLA ++GLS
Sbjct: 269 VRQQRALQRLGVMQPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLS 328
Query: 493 RSQVSNWFINARVRLWKPMIEDMYEE 518
R QVSNWFINARVRLWKPM+E+MY+E
Sbjct: 329 RGQVSNWFINARVRLWKPMVEEMYKE 354
>AT1G19700.1 | chr1:6809958-6811854 REVERSE LENGTH=539
Length = 538
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 66/70 (94%)
Query: 449 SWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
+WRPQRGLPE SV+VL+AW+FE+FL PYPK+SEK MLA ++GLS++QV+NWFINARVRLW
Sbjct: 351 AWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLW 410
Query: 509 KPMIEDMYEE 518
KPMIE+MY+E
Sbjct: 411 KPMIEEMYKE 420
>AT4G34610.1 | chr4:16530546-16532498 REVERSE LENGTH=533
Length = 532
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 65/71 (91%)
Query: 448 QSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRL 507
Q+WRPQRGLPE SV +L+AW+FE+FL PYPKDS+K MLA ++GLSR QVSNWFINARVRL
Sbjct: 313 QAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRL 372
Query: 508 WKPMIEDMYEE 518
WKPM+E++Y+E
Sbjct: 373 WKPMVEEIYKE 383
>AT2G23760.1 | chr2:10107951-10112736 REVERSE LENGTH=628
Length = 627
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 72/85 (84%)
Query: 433 IQKHWAMQQLRRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLS 492
+++ A + +Q++WRPQRGLPE+SV +L+AW+FE+FL PYP D++K +LA ++GLS
Sbjct: 408 LRQQRAFHHMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLS 467
Query: 493 RSQVSNWFINARVRLWKPMIEDMYE 517
R+QVSNWFINARVRLWKPM+E+MY+
Sbjct: 468 RNQVSNWFINARVRLWKPMVEEMYQ 492
>AT1G75410.1 | chr1:28300095-28301890 REVERSE LENGTH=525
Length = 524
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 66/70 (94%)
Query: 449 SWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
+WRPQRGLPE SV++L+AW+FE+FL PYPK+SEK ML+ ++GLS++QV+NWFINARVRLW
Sbjct: 346 AWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRLW 405
Query: 509 KPMIEDMYEE 518
KPMIE+MY+E
Sbjct: 406 KPMIEEMYKE 415
>AT2G27990.1 | chr2:11921540-11923902 REVERSE LENGTH=585
Length = 584
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 70/87 (80%)
Query: 447 QQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVR 506
Q WRPQRGLPE++VAVL+AW+F++FL PYP DS+K MLA ++GLSR+QVSNWFINARVR
Sbjct: 422 QHIWRPQRGLPERAVAVLRAWLFDHFLHPYPTDSDKQMLATQTGLSRNQVSNWFINARVR 481
Query: 507 LWKPMIEDMYEELKKTSGGSDGAAEIE 533
LWKPM+E+++ K +D + IE
Sbjct: 482 LWKPMVEEIHTLETKAIKNADTSHNIE 508
>AT5G41410.1 | chr5:16580424-16583770 FORWARD LENGTH=612
Length = 611
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 68/84 (80%)
Query: 433 IQKHWAMQQLRRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLS 492
+++ + +Q+ D WRPQRGLPE++V L+AW+FE+FL PYP D +K +LA ++GLS
Sbjct: 375 LRQQKSYRQMTLVDAHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLS 434
Query: 493 RSQVSNWFINARVRLWKPMIEDMY 516
RSQVSNWFINARVRLWKPMIE+MY
Sbjct: 435 RSQVSNWFINARVRLWKPMIEEMY 458
>AT2G27220.2 | chr2:11637306-11639507 REVERSE LENGTH=440
Length = 439
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 72/82 (87%), Gaps = 3/82 (3%)
Query: 449 SWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
+WRPQRGLPEK+V+VL++W+FE+FL PYP+D +K MLA ++GL++SQVSNWFINARVR+W
Sbjct: 236 AWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMW 295
Query: 509 KPMIEDMYEE---LKKTSGGSD 527
KP++E++Y E ++++ GSD
Sbjct: 296 KPLVEELYSEEMDIEESRKGSD 317
>AT2G35940.1 | chr2:15089171-15091699 REVERSE LENGTH=681
Length = 680
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
Query: 432 FIQKHW----AMQQL---RRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDM 484
F+ H A+QQL + +WRPQRGLPE++V+VL+AW+FE+FL PYPKDS+K M
Sbjct: 361 FVDHHLRQQRALQQLGMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHM 420
Query: 485 LAARSGLSRSQVSNWFINARVRLWKP 510
LA ++GL+RSQVSNWFINARVRLWKP
Sbjct: 421 LAKQTGLTRSQVSNWFINARVRLWKP 446
>AT1G75430.1 | chr1:28308121-28309517 REVERSE LENGTH=291
Length = 290
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 65/72 (90%)
Query: 447 QQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVR 506
+ +W+P RGLPE SVA+L+AW+F++FL PYP ++EK +LA+++GLS++QVSNWFINARVR
Sbjct: 200 RHAWKPIRGLPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVR 259
Query: 507 LWKPMIEDMYEE 518
LWKPMIE+MY E
Sbjct: 260 LWKPMIEEMYRE 271
>AT5G02030.1 | chr5:395754-398872 FORWARD LENGTH=576
Length = 575
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 61/67 (91%)
Query: 450 WRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWK 509
WRP RGLPE++V VL+AW+F++FL PYP D++K MLA ++GLSR+QVSNWFINARVR+WK
Sbjct: 349 WRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWK 408
Query: 510 PMIEDMY 516
PM+E+++
Sbjct: 409 PMVEEIH 415
>AT5G25220.1 | chr5:8736208-8738115 FORWARD LENGTH=432
Length = 431
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 456 LPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW--KPMIE 513
LP + +VLKAW + PYP + +K L +GL Q++NWFIN R R W P
Sbjct: 351 LPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSS 410
Query: 514 DMYEELKKTSGGSDGAAE 531
+ + +K++ G + E
Sbjct: 411 TVLKNKRKSNAGDNSGRE 428
>AT4G08150.1 | chr4:5147969-5150610 REVERSE LENGTH=399
Length = 398
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 464 LKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKPMIEDM 515
L W ++ PYP +SEK LA +GL + Q++NWFIN R R WKP EDM
Sbjct: 316 LLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPS-EDM 366
>AT1G23380.2 | chr1:8297499-8302492 REVERSE LENGTH=330
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 456 LPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKPMIEDM 515
LP ++ L W ++ PYP + +K LA +GL + Q++NWFIN R R WKP E+M
Sbjct: 255 LPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPS-ENM 313
Query: 516 YEELKKTSGGS 526
+ S GS
Sbjct: 314 PFAMMDDSSGS 324
>AT1G62990.1 | chr1:23337468-23340348 FORWARD LENGTH=292
Length = 291
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 456 LPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
LP + VLK W ++ PYP + +K L +GL Q++NWFIN R R W
Sbjct: 223 LPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275
>AT1G62360.1 | chr1:23058796-23061722 REVERSE LENGTH=383
Length = 382
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 464 LKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKPMIEDM 515
L W ++ PYP + +K LA +GL + Q++NWFIN R R WKP EDM
Sbjct: 299 LLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPS-EDM 349
>AT5G11060.1 | chr5:3510408-3512967 FORWARD LENGTH=394
Length = 393
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 456 LPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
LP + +VLK+W + PYP + +K L +GL Q++NWFIN R R W
Sbjct: 315 LPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 367
>AT1G70510.1 | chr1:26576635-26582145 FORWARD LENGTH=311
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 456 LPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLWKP---MI 512
LP ++ L W + PYP + +K LA +GL + Q++NWFIN R R WKP M
Sbjct: 237 LPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMP 296
Query: 513 EDMYEELKKT 522
DM ++ +T
Sbjct: 297 FDMMDDSNET 306
>AT4G32040.1 | chr4:15494127-15496009 FORWARD LENGTH=384
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 456 LPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFINARVRLW 508
LP + +VLK W + PYP + +K L +GL Q++NWFIN R R W
Sbjct: 310 LPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNW 362
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.128 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,084,753
Number of extensions: 198011
Number of successful extensions: 546
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 546
Number of HSP's successfully gapped: 21
Length of query: 545
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 442
Effective length of database: 8,282,721
Effective search space: 3660962682
Effective search space used: 3660962682
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)