Os12g0160500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to BEL1-related homeotic protein 5.
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Os12g0160500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to BEL1-related homeotic protein 5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.02 | 0.396 | 11.6 | 1.11 | 1.94 | -0.191 | 0.545 | 1.47 | 0.0869 | 22 | 1015 | 6338 | -- | -- |
| 77.9 | 0.411 | 11.7 | 0.91 | 1.95 | -0.473 | 0.507 | -- | 0.0268 | 21.9 | 1016 | 6213 | -- | -- |
| 72.17 | 0.396 | 11.6 | 1.08 | 1.94 | -0.198 | -- | 1.44 | 0.0831 | 22 | 1015 | 6305 | -- | -- |
| 77.71 | 0.411 | 11.7 | 0.998 | 1.94 | -0.615 | -- | -- | 0.0215 | 22.1 | 1017 | 36456 | -- | -- |
| 298.94 | 0.805 | 11.6 | 1.18 | -- | -0.227 | -- | 1.48 | 0.103 | -- | 1015 | 6802 | -- | -- |
| 82.58 | 0.426 | 11.7 | 0.622 | 1.95 | -- | 0.461 | -- | -0.0571 | 22 | -- | -- | -- | -- |
| 83.41 | 0.428 | 11.7 | 0.604 | 1.95 | -- | -- | -- | -0.0582 | 22 | -- | -- | -- | -- |
| 304.63 | 0.813 | 11.6 | 0.981 | -- | -0.617 | -- | -- | 0.0711 | -- | 1020 | 37249 | -- | -- |
| 87.22 | 0.435 | 11.7 | -- | 1.95 | 0.38 | -- | -- | -0.217 | 22 | 1016 | 47520 | -- | -- |
| 311.98 | 0.825 | 11.6 | 0.628 | -- | -- | -- | -- | -0.0565 | -- | -- | -- | -- | -- |
| 93.02 | 0.451 | 11.7 | -- | 1.95 | -- | -- | -- | -0.125 | 22.1 | -- | -- | -- | -- |
| 314.97 | 0.827 | 11.7 | -- | -- | 0.441 | -- | -- | -0.265 | -- | 1013 | 47067 | -- | -- |
| 322.38 | 0.838 | 11.6 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.17 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 9 |
| 3 | 68.87 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 6 | 68.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 22 |
| 14 | 69.69 | radiation | 1.0 | 30 | > th | dose independent | sin | 2 | NA |
| 18 | 69.89 | radiation | 1.0 | 30 | < th | dose independent | sin | 3 | NA |
| 21 | 69.96 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 26 | 70.26 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 9 |
| 48 | 70.41 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 49 | 70.49 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 50 | 70.53 | radiation | 1.0 | 30 | < th | dose dependent | sin | 2 | NA |
| 58 | 70.76 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 63 | 70.79 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 67 | 70.86 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 70 | 70.89 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 17 |
| 71 | 70.90 | humidity | 80.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 72 | 70.90 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 18 |
| 82 | 70.96 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 100 | 71.03 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 118 | 71.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 160 | 71.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 17 |
| 167 | 71.25 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 170 | 71.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 172 | 71.27 | humidity | 80.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 183 | 71.31 | humidity | 80.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 188 | 71.33 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 206 | 71.35 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 216 | 71.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 224 | 71.42 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 236 | 71.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 19 |
| 240 | 71.43 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 243 | 71.45 | humidity | 80.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 268 | 71.50 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 279 | 71.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 283 | 71.52 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 295 | 71.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 18 |
| 305 | 71.55 | humidity | 70.0 | 10 | > th | dose independent | rect. | 1 | 16 |
| 307 | 71.55 | wind | 1.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 311 | 71.56 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 312 | 71.57 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 20 |
| 315 | 71.58 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 324 | 71.60 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 15 |
| 325 | 71.60 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 334 | 71.62 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 339 | 71.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 353 | 71.66 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 20 |
| 356 | 71.67 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 360 | 71.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 364 | 71.69 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 374 | 71.71 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 378 | 71.72 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 394 | 71.76 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 404 | 71.76 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 435 | 71.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 439 | 71.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 464 | 71.90 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 17 |
| 487 | 71.93 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 502 | 71.95 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 503 | 71.95 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 519 | 71.99 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 521 | 71.99 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 543 | 72.02 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 558 | 72.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 565 | 72.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 571 | 72.06 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 15 |
| 578 | 72.06 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 584 | 72.07 | radiation | 1.0 | 30 | < th | dose independent | rect. | 3 | 14 |
| 604 | 72.10 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 618 | 72.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 619 | 72.13 | wind | 1.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 630 | 72.13 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 633 | 72.14 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 635 | 72.14 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 656 | 72.17 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 664 | 72.18 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 684 | 72.20 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 755 | 72.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 770 | 72.28 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 792 | 72.30 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 7 | 11 |
| 815 | 72.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 823 | 72.33 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 837 | 72.35 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 845 | 72.35 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 846 | 72.36 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 850 | 72.36 | humidity | 80.0 | 30 | > th | dose independent | rect. | 7 | 11 |
| 876 | 72.37 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 877 | 72.37 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 911 | 72.40 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 948 | 72.43 | wind | 3.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 976 | 72.43 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 12 | 19 |