BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0160500 Os12g0160500|AK120844
(417 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35940.1 | chr2:15089171-15091699 REVERSE LENGTH=681 142 3e-34
AT2G27220.2 | chr2:11637306-11639507 REVERSE LENGTH=440 134 8e-32
AT4G34610.1 | chr4:16530546-16532498 REVERSE LENGTH=533 132 3e-31
AT1G19700.1 | chr1:6809958-6811854 REVERSE LENGTH=539 131 7e-31
AT2G16400.1 | chr2:7101490-7103200 REVERSE LENGTH=483 131 8e-31
AT4G36870.1 | chr4:17369423-17373723 FORWARD LENGTH=740 130 2e-30
AT2G27990.1 | chr2:11921540-11923902 REVERSE LENGTH=585 130 2e-30
AT1G75410.1 | chr1:28300095-28301890 REVERSE LENGTH=525 129 3e-30
AT5G41410.1 | chr5:16580424-16583770 FORWARD LENGTH=612 128 5e-30
AT5G02030.1 | chr5:395754-398872 FORWARD LENGTH=576 128 5e-30
AT2G23760.1 | chr2:10107951-10112736 REVERSE LENGTH=628 126 2e-29
AT4G32980.1 | chr4:15914865-15916873 REVERSE LENGTH=474 121 7e-28
AT1G75430.1 | chr1:28308121-28309517 REVERSE LENGTH=291 115 5e-26
AT1G23380.2 | chr1:8297499-8302492 REVERSE LENGTH=330 61 9e-10
AT1G70510.1 | chr1:26576635-26582145 FORWARD LENGTH=311 61 1e-09
AT5G25220.1 | chr5:8736208-8738115 FORWARD LENGTH=432 59 4e-09
AT4G08150.1 | chr4:5147969-5150610 REVERSE LENGTH=399 59 5e-09
AT5G11060.1 | chr5:3510408-3512967 FORWARD LENGTH=394 58 1e-08
AT1G62990.1 | chr1:23337468-23340348 FORWARD LENGTH=292 57 2e-08
AT4G32040.1 | chr4:15494127-15496009 FORWARD LENGTH=384 57 2e-08
AT1G62360.1 | chr1:23058796-23061722 REVERSE LENGTH=383 56 4e-08
>AT2G35940.1 | chr2:15089171-15091699 REVERSE LENGTH=681
Length = 680
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 62/63 (98%), Positives = 62/63 (98%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDK MLAKQTGLTRSQVSNWFINARVRLWK
Sbjct: 386 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWK 445
Query: 177 PMV 179
PMV
Sbjct: 446 PMV 448
>AT2G27220.2 | chr2:11637306-11639507 REVERSE LENGTH=440
Length = 439
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 62/63 (98%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPE+AVSVLR+WLFEHFLHPYP+D DKVMLAKQTGLT+SQVSNWFINARVR+WK
Sbjct: 237 WRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWK 296
Query: 177 PMV 179
P+V
Sbjct: 297 PLV 299
>AT4G34610.1 | chr4:16530546-16532498 REVERSE LENGTH=533
Length = 532
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 60/63 (95%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPE +V +LRAWLFEHFLHPYPKDSDK+MLA+QTGL+R QVSNWFINARVRLWK
Sbjct: 315 WRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWK 374
Query: 177 PMV 179
PMV
Sbjct: 375 PMV 377
>AT1G19700.1 | chr1:6809958-6811854 REVERSE LENGTH=539
Length = 538
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 62/63 (98%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPE +VSVLRAWLFEHFLHPYPK+S+K+MLAKQTGL+++QV+NWFINARVRLWK
Sbjct: 352 WRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWK 411
Query: 177 PMV 179
PM+
Sbjct: 412 PMI 414
>AT2G16400.1 | chr2:7101490-7103200 REVERSE LENGTH=483
Length = 482
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 60/63 (95%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLP+ +V VLRAWLFEHFLHPYPKDSDK+MLA+QTGL+R QVSNWFINARVRLWK
Sbjct: 286 WRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWK 345
Query: 177 PMV 179
PMV
Sbjct: 346 PMV 348
>AT4G36870.1 | chr4:17369423-17373723 FORWARD LENGTH=740
Length = 739
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 61/63 (96%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPER+V++LRAWLFEHFLHPYP D+DK +LA+QTGL+R+QVSNWFINARVRLWK
Sbjct: 499 WRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWK 558
Query: 177 PMV 179
PMV
Sbjct: 559 PMV 561
>AT2G27990.1 | chr2:11921540-11923902 REVERSE LENGTH=585
Length = 584
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 60/63 (95%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPERAV+VLRAWLF+HFLHPYP DSDK MLA QTGL+R+QVSNWFINARVRLWK
Sbjct: 425 WRPQRGLPERAVAVLRAWLFDHFLHPYPTDSDKQMLATQTGLSRNQVSNWFINARVRLWK 484
Query: 177 PMV 179
PMV
Sbjct: 485 PMV 487
>AT1G75410.1 | chr1:28300095-28301890 REVERSE LENGTH=525
Length = 524
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 62/63 (98%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPE +VS+LRAWLFEHFLHPYPK+S+K+ML+KQTGL+++QV+NWFINARVRLWK
Sbjct: 347 WRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRLWK 406
Query: 177 PMV 179
PM+
Sbjct: 407 PMI 409
>AT5G41410.1 | chr5:16580424-16583770 FORWARD LENGTH=612
Length = 611
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPERAV+ LRAWLFEHFLHPYP D DK +LA+QTGL+RSQVSNWFINARVRLWK
Sbjct: 392 WRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWK 451
Query: 177 PMV 179
PM+
Sbjct: 452 PMI 454
>AT5G02030.1 | chr5:395754-398872 FORWARD LENGTH=576
Length = 575
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 61/63 (96%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRP RGLPERAV+VLRAWLF+HFLHPYP D+DK+MLAKQTGL+R+QVSNWFINARVR+WK
Sbjct: 349 WRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWK 408
Query: 177 PMV 179
PMV
Sbjct: 409 PMV 411
>AT2G23760.1 | chr2:10107951-10112736 REVERSE LENGTH=628
Length = 627
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 61/63 (96%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPER+V++LRAWLFEHFL+PYP D+DK +LA+QTGL+R+QVSNWFINARVRLWK
Sbjct: 425 WRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWK 484
Query: 177 PMV 179
PMV
Sbjct: 485 PMV 487
>AT4G32980.1 | chr4:15914865-15916873 REVERSE LENGTH=474
Length = 473
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 60/63 (95%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
WRPQRGLPE++VSVLR W+F++FLHPYPKDS+K +LA ++GLTRSQVSNWFINARVRLWK
Sbjct: 373 WRPQRGLPEKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVRLWK 432
Query: 177 PMV 179
PM+
Sbjct: 433 PMI 435
>AT1G75430.1 | chr1:28308121-28309517 REVERSE LENGTH=291
Length = 290
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 59/63 (93%)
Query: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
W+P RGLPE +V++LRAWLF+HFLHPYP +++K++LA QTGL+++QVSNWFINARVRLWK
Sbjct: 203 WKPIRGLPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWK 262
Query: 177 PMV 179
PM+
Sbjct: 263 PMI 265
>AT1G23380.2 | chr1:8297499-8302492 REVERSE LENGTH=330
Length = 329
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 123 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 177
LP A L W H+ PYP + DK+ LA TGL + Q++NWFIN R R WKP
Sbjct: 255 LPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKP 309
>AT1G70510.1 | chr1:26576635-26582145 FORWARD LENGTH=311
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 123 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 177
LP A L W H PYP + DK+ LA++TGL + Q++NWFIN R R WKP
Sbjct: 237 LPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKP 291
>AT5G25220.1 | chr5:8736208-8738115 FORWARD LENGTH=432
Length = 431
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%)
Query: 123 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLW 175
LP SVL+AW H PYP + DK L ++TGL Q++NWFIN R R W
Sbjct: 351 LPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 403
>AT4G08150.1 | chr4:5147969-5150610 REVERSE LENGTH=399
Length = 398
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 131 LRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 177
L W H+ PYP +S+KV LA+ TGL + Q++NWFIN R R WKP
Sbjct: 316 LLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKP 362
>AT5G11060.1 | chr5:3510408-3512967 FORWARD LENGTH=394
Length = 393
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 123 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLW 175
LP SVL++W H PYP + DK L ++TGL Q++NWFIN R R W
Sbjct: 315 LPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 367
>AT1G62990.1 | chr1:23337468-23340348 FORWARD LENGTH=292
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 123 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLW 175
LP +VL+ W +H PYP + DK L ++TGL Q++NWFIN R R W
Sbjct: 223 LPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275
>AT4G32040.1 | chr4:15494127-15496009 FORWARD LENGTH=384
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 123 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLW 175
LP SVL+ W H PYP + DK L ++TGL Q++NWFIN R R W
Sbjct: 310 LPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNW 362
>AT1G62360.1 | chr1:23058796-23061722 REVERSE LENGTH=383
Length = 382
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 131 LRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 177
L W H+ PYP + K+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 299 LLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKP 345
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,067,904
Number of extensions: 98278
Number of successful extensions: 166
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 166
Number of HSP's successfully gapped: 21
Length of query: 417
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 316
Effective length of database: 8,337,553
Effective search space: 2634666748
Effective search space used: 2634666748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)