Os02g0226600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : POX domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0226600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : POX domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.33 | 0.491 | 3.15 | 0.0732 | 0.52 | 0.364 | 0.362 | 0.345 | -0.0369 | 11.6 | 19.02 | 4 | -- | -- |
| 109.66 | 0.488 | 3.15 | 0.081 | 0.528 | 0.371 | 0.128 | -- | -0.0259 | 11.6 | 18.92 | 4 | -- | -- |
| 109.59 | 0.488 | 3.15 | 0.0745 | 0.52 | 0.369 | -- | 0.11 | -0.0438 | 11.6 | 19.02 | 4 | -- | -- |
| 109.64 | 0.488 | 3.15 | 0.0652 | 0.517 | 0.365 | -- | -- | -0.0381 | 11.6 | 18.92 | 4 | -- | -- |
| 117.8 | 0.508 | 3.16 | 0.058 | -- | 0.0454 | -- | 0.12 | -0.0307 | -- | 19.02 | 4 | -- | -- |
| 114.9 | 0.503 | 3.15 | 0.0544 | 0.227 | -- | 0.0115 | -- | -0.0281 | 10.7 | -- | -- | -- | -- |
| 114.9 | 0.502 | 3.15 | 0.0548 | 0.227 | -- | -- | -- | -0.0281 | 10.7 | -- | -- | -- | -- |
| 117.88 | 0.506 | 3.16 | 0.0557 | -- | 0.0522 | -- | -- | -0.028 | -- | 21.73 | 4 | -- | -- |
| 109.75 | 0.488 | 3.15 | -- | 0.514 | 0.363 | -- | -- | -0.0456 | 11.6 | 18.92 | 4 | -- | -- |
| 118.08 | 0.508 | 3.16 | 0.0504 | -- | -- | -- | -- | -0.0293 | -- | -- | -- | -- | -- |
| 114.98 | 0.502 | 3.15 | -- | 0.226 | -- | -- | -- | -0.0342 | 10.7 | -- | -- | -- | -- |
| 117.96 | 0.508 | 3.16 | -- | -- | 0.0456 | -- | -- | -0.0369 | -- | 18.92 | 4 | -- | -- |
| 118.15 | 0.507 | 3.16 | -- | -- | -- | -- | -- | -0.0349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.95 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 5 | 102.58 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 9 | 5 |
| 6 | 102.61 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 7 | 102.62 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 8 | 102.66 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 31 | 102.87 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 121 | 104.20 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 126 | 104.79 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 128 | 104.87 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 7 | 10 |
| 150 | 105.23 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 156 | 105.41 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 20 | 18 |
| 160 | 105.43 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 162 | 105.44 | radiation | 10.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 175 | 105.58 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 219 | 105.91 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 13 |
| 226 | 106.03 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 255 | 106.62 | wind | 1.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 256 | 106.66 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 270 | 107.03 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 271 | 107.07 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 284 | 107.35 | wind | 7.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 286 | 107.40 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 292 | 107.65 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 9 |
| 316 | 107.96 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 321 | 108.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 332 | 108.49 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 5 |
| 335 | 108.49 | wind | 1.0 | 10 | < th | dose dependent | rect. | 17 | 5 |
| 338 | 108.50 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 343 | 108.50 | wind | 1.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 467 | 110.18 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 469 | 110.23 | radiation | 20.0 | 10 | < th | dose independent | rect. | 21 | 16 |
| 475 | 110.30 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 3 |
| 478 | 110.32 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 479 | 110.34 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 481 | 110.38 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 483 | 110.42 | wind | 7.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 490 | 110.47 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 8 |
| 506 | 110.59 | radiation | 20.0 | 10 | < th | dose independent | rect. | 9 | 15 |
| 516 | 110.63 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 8 |
| 539 | 110.68 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 541 | 110.69 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 565 | 110.78 | radiation | 20.0 | 10 | < th | dose independent | rect. | 9 | 17 |
| 574 | 110.84 | humidity | 70.0 | 30 | > th | dose independent | rect. | 21 | 15 |
| 588 | 110.91 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 595 | 110.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 597 | 110.95 | humidity | 70.0 | 10 | > th | dose independent | rect. | 21 | 20 |
| 601 | 110.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 614 | 110.99 | atmosphere | 995.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 622 | 111.07 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 626 | 111.08 | radiation | 20.0 | 10 | < th | dose independent | rect. | 9 | 8 |
| 662 | 111.16 | atmosphere | 1000.0 | 30 | > th | dose independent | sin | 2 | NA |
| 663 | 111.16 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 2 | NA |
| 726 | 111.29 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 15 |
| 729 | 111.30 | radiation | 20.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 740 | 111.34 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 756 | 111.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 761 | 111.42 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 771 | 111.46 | humidity | 70.0 | 10 | > th | dose independent | sin | 23 | NA |
| 776 | 111.46 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 782 | 111.47 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 794 | 111.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 795 | 111.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 801 | 111.50 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 17 |
| 808 | 111.53 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 811 | 111.53 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 20 |
| 813 | 111.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 817 | 111.54 | humidity | 70.0 | 10 | > th | dose independent | rect. | 6 | 11 |
| 841 | 111.59 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 7 |
| 842 | 111.59 | temperature | 25.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 848 | 111.60 | radiation | 20.0 | 10 | < th | dose independent | rect. | 14 | 23 |
| 852 | 111.62 | atmosphere | 995.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 860 | 111.63 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 880 | 111.67 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 898 | 111.70 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 11 |
| 967 | 111.78 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 10 | 1 |