BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0226600 Os02g0226600|AK109849
(539 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0226600 POX domain containing protein 748 0.0
Os06g0562300 POX domain containing protein 241 1e-63
Os10g0534900 Similar to Prep (Fragment) 151 1e-36
Os03g0680800 Similar to Prep (Fragment) 147 1e-35
Os12g0636200 Similar to Prep (Fragment) 147 2e-35
Os11g0158600 POX domain containing protein 145 8e-35
Os03g0165300 Similar to Prep (Fragment) 144 2e-34
Os06g0108900 POX domain containing protein 141 1e-33
Os03g0124000 POX domain containing protein 141 1e-33
Os05g0455200 Similar to Homeodomain protein JUBEL2 139 5e-33
Os01g0848400 Acid phosphatase/vanadium-dependent haloperoxi... 137 3e-32
Os12g0160500 Similar to BEL1-related homeotic protein 5 126 5e-29
Os03g0680700 Similar to Knotted1-interacting protein 117 2e-26
AK064665 115 7e-26
Os03g0732100 Similar to Homeodomain protein JUBEL1 100 2e-21
>Os02g0226600 POX domain containing protein
Length = 539
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/539 (71%), Positives = 387/539 (71%)
Query: 1 MSGNPSFSQLGAVDAAMNGGYFMAASGNGADVPLFHPAMAPPHDHXXXXXXXXXXXXXXX 60
MSGNPSFSQLGAVDAAMNGGYFMAASGNGADVPLFHPAMAPPHDH
Sbjct: 1 MSGNPSFSQLGAVDAAMNGGYFMAASGNGADVPLFHPAMAPPHDHGGSFGYGDAAAAAMD 60
Query: 61 XXXXXXXXXXXXXXXXXTQLFXXXXXXXXXXXXDYLGATTPPEEEMGGGYDVAVGDSSGG 120
TQLF DYLGATTPPEEEMGGGYDVAVGDSSGG
Sbjct: 61 VGAHFAAANNLVLASLATQLFGAAPAAAAHGHGDYLGATTPPEEEMGGGYDVAVGDSSGG 120
Query: 121 AVSLACLGHGQPGDMAAGWCSTSARKPSCNWSSSNAGVHGGSYYLAGVPEXXXXXXXXXX 180
AVSLACLGHGQPGDMAAGWCSTSARKPSCNWSSSNAGVHGGSYYLAGVPE
Sbjct: 121 AVSLACLGHGQPGDMAAGWCSTSARKPSCNWSSSNAGVHGGSYYLAGVPEAAGFVSAAAA 180
Query: 181 XXXXXXXXXXXXXXXXXXNAGGDQCSSAASRSGLTQMSRXXXXXXXXXXXXXXXAANFXX 240
NAGGDQCSSAASRSGLTQMSR AANF
Sbjct: 181 ASELSLSLCSKSSSDSMLNAGGDQCSSAASRSGLTQMSRVVVVEPEPPLVPYYPAANFAV 240
Query: 241 XXXXXXXXXXXXXXLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
LN
Sbjct: 241 VVARSRYAAVAQQVLNDAVGCVLGGVADAAADSASGVDSGSSRPSSCSVAGGAPSSAVSS 300
Query: 301 NNQLIASSGEHTHGGGDASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATA 360
NNQLIASSGEHTHGGGDASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATA
Sbjct: 301 NNQLIASSGEHTHGGGDASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATA 360
Query: 361 RAAGMSSSSICAPFAHRAVSAMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERE 420
RAAGMSSSSICAPFAHRAVSAMYHGLRRRIAGEIMS GRPCRGGESSSAVTGGERE
Sbjct: 361 RAAGMSSSSICAPFAHRAVSAMYHGLRRRIAGEIMSAAAAAGRPCRGGESSSAVTGGERE 420
Query: 421 RSWESAFIQKHWAVQQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEML 480
RSWESAFIQKHWAVQQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEML
Sbjct: 421 RSWESAFIQKHWAVQQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEML 480
Query: 481 AARSGLSRNQVSNWFINARVRLWKPMIEEMCEELKRSSGGGAGNQALAMEHMNSQDVVS 539
AARSGLSRNQVSNWFINARVRLWKPMIEEMCEELKRSSGGGAGNQALAMEHMNSQDVVS
Sbjct: 481 AARSGLSRNQVSNWFINARVRLWKPMIEEMCEELKRSSGGGAGNQALAMEHMNSQDVVS 539
>Os06g0562300 POX domain containing protein
Length = 545
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 170/222 (76%), Gaps = 15/222 (6%)
Query: 318 ASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHR 377
A AQRLR +LQL+D+K NQC++E+QST ARFN++ +T + A FA R
Sbjct: 336 AEAQRLR----KLLQLVDEKCNQCVEEMQSTAARFNSMVRSTG----GGGGGLTAAFAGR 387
Query: 378 AVSAMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERERSWESAFIQKHWAVQQL 437
AV+A Y +RRR+ G++++ S++A E+ERSWES+FIQKHWA+QQL
Sbjct: 388 AVAAAYRRVRRRVMGQLVAAATARSS-----SSAAAAALEEKERSWESSFIQKHWAMQQL 442
Query: 438 RRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFIN 497
RRG+QQ WRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEK+MLAARSGLSR+QVSNWFIN
Sbjct: 443 RRGDQQSWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKDMLAARSGLSRSQVSNWFIN 502
Query: 498 ARVRLWKPMIEEMCEELKRSSGGGAGNQALAMEHMNSQDVVS 539
ARVRLWKPMIE+M EELK++SGG G A +EH++S+DV+S
Sbjct: 503 ARVRLWKPMIEDMYEELKKTSGGSDG--AAEIEHLSSKDVLS 542
>Os10g0534900 Similar to Prep (Fragment)
Length = 586
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 17/213 (7%)
Query: 318 ASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHR 377
A QRL+ +L TML+ +D++Y + +++++ A F + AG +++ A R
Sbjct: 208 AELQRLKGKLYTMLEEVDRRYRRYCEQMRALAASFEAV-------AGERAAASYTRLASR 260
Query: 378 AVSAMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTG---GERERSWESAFIQKHWAV 434
+S + LR + ++ + G E +AV G GE R +
Sbjct: 261 TISRHFRSLRDGVVAQLQAVRKQLG------EKDTAVPGMTKGETPRLRVLDQCLRQHKA 314
Query: 435 QQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNW 494
Q E WRPQRGLPE++V++L+AW+FE+FL PYP D +K +LA ++GLSR+QV+NW
Sbjct: 315 YQAGMLESHPWRPQRGLPERAVSILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVANW 374
Query: 495 FINARVRLWKPMIEEM-CEELKRSSGGGAGNQA 526
FINARVRLWKPM+EEM EE+K G G QA
Sbjct: 375 FINARVRLWKPMVEEMYAEEMKDEEGSGQSTQA 407
>Os03g0680800 Similar to Prep (Fragment)
Length = 675
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 11/193 (5%)
Query: 321 QRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVS 380
Q ++L+ ML +D+KY ++Q + F+ + AG ++ A + +S
Sbjct: 269 QNKMAKLMAMLDEVDRKYKHYYHQMQIVVSSFDMV-------AGSGAAKPYTAVALQTIS 321
Query: 381 AMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERERSWESAFIQKHWAVQQLRRG 440
+ L+ I +I G ESSS G + +++ A QQ
Sbjct: 322 KHFRCLKDAINDQINVIRKKLGEE----ESSSGKEGKLTRLRYIDQQLRQQRAFQQYGLL 377
Query: 441 EQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARV 500
+Q WRPQRGLPE SV++L+AW+FE+FL PYPKDSEK MLA ++GL+R+Q+SNWFINARV
Sbjct: 378 QQNAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARV 437
Query: 501 RLWKPMIEEMCEE 513
RLWKPMIE+M +E
Sbjct: 438 RLWKPMIEDMYKE 450
>Os12g0636200 Similar to Prep (Fragment)
Length = 647
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 15/218 (6%)
Query: 321 QRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVS 380
Q ++L+ ML +D+KY ++Q+ + F+ + AG S+ A + +S
Sbjct: 275 QNKMAKLMAMLDEVDRKYKHYYHQMQTVVSSFDVV-------AGPGSAKPYTAVALQTIS 327
Query: 381 AMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERERSWESAFIQKHWAVQQLRRG 440
+ L+ I +I G E+SS G + +++ A QQ
Sbjct: 328 RHFRCLKDAINDQINVIRKKLGEE----ENSSGKEGKLTRLRYIDQQLRQQRAFQQYGMI 383
Query: 441 EQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARV 500
Q WRPQRGLPE SV +L+AW+FE+FL PYPKDSEK MLA ++GL+R+Q+SNWFINARV
Sbjct: 384 PQNAWRPQRGLPENSVTILRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARV 443
Query: 501 RLWKPMIEEMCEE----LKRSSGGGAGNQALAMEHMNS 534
RLWKPMIE+M +E L++ S + N + + M S
Sbjct: 444 RLWKPMIEDMYKEEIGDLEQDSNSSSDNAPRSKDKMAS 481
>Os11g0158600 POX domain containing protein
Length = 678
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 112/198 (56%), Gaps = 14/198 (7%)
Query: 321 QRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVS 380
Q + +L+ ML ++Q+Y Q ++Q A F + AG S+ A R +S
Sbjct: 248 QMKKGKLINMLDEVEQRYRQYHQQMQVVVASFEAV-------AGGGSARTYTALALRTIS 300
Query: 381 AMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERERSWESAFIQKHWAVQQLRRG 440
+ LR IAG++ + G + T G R R + + G
Sbjct: 301 RQFRCLRDAIAGQVRAASRALGEAV-DADGGCGRTVGSRLRYIDHQ---LRQQRALQQLG 356
Query: 441 EQQ--CWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINA 498
Q WRPQRGLPE+SV++L+AW+FE+FL PYPKDS+K MLA ++GL+R+QVSNWFINA
Sbjct: 357 MMQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINA 416
Query: 499 RVRLWKPMIEEM-CEELK 515
RVRLWKPM+EEM EE K
Sbjct: 417 RVRLWKPMVEEMYLEETK 434
>Os03g0165300 Similar to Prep (Fragment)
Length = 600
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 113/190 (59%), Gaps = 15/190 (7%)
Query: 327 LLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVSAMYHGL 386
L+ ML +D++Y ++Q + F+ + AG ++ A + +S + L
Sbjct: 224 LMAMLDQVDRRYRHYHHQMQIVMSSFDAV-------AGGGAARPYTALALQTISRHFRSL 276
Query: 387 RRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERER-SWESAFIQKHWAVQQ--LRRGEQQ 443
R I + + R G + +SA GG R + +++ A+QQ + + Q
Sbjct: 277 RDAIGAQAQA-----ARRGLGEQDASAQGGGGLSRLRYIDQQLRQQRAMQQFGMMQQPQH 331
Query: 444 CWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARVRLW 503
WRPQRGLPE +V+VL+AW+FE+FL PYPKDSEK MLA ++GLSR QVSNWFINARVRLW
Sbjct: 332 AWRPQRGLPESAVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRLW 391
Query: 504 KPMIEEMCEE 513
KPMIEEM +E
Sbjct: 392 KPMIEEMYKE 401
>Os06g0108900 POX domain containing protein
Length = 530
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 15/212 (7%)
Query: 321 QRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVS 380
+R ++ +L+M++ +D++Y + +++++ F + AG ++ + A RA+S
Sbjct: 172 ERRKARILSMVEEVDRRYRRYREQMRAVEVSFEAV-------AGGGAAQVYTKLAMRAMS 224
Query: 381 AMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAV-----TGGE--RERSWESAFIQKHWA 433
+ LR + G++ + G R A T G+ R R + Q+ A
Sbjct: 225 RHFRCLRDALVGQVRALRNAMGESQRDAAGGVAAAAPGATKGDTPRLRVLDQCLRQQR-A 283
Query: 434 VQQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSN 493
QQ + WRPQRGLPE++VAVL+AW+FE+FL PYP D +K +LA ++GLSR+QVSN
Sbjct: 284 FQQSGAVDSFPWRPQRGLPERAVAVLRAWLFEHFLHPYPNDVDKHILARQTGLSRSQVSN 343
Query: 494 WFINARVRLWKPMIEEMCEELKRSSGGGAGNQ 525
WFINARVRLWKPMIE+M +E + N+
Sbjct: 344 WFINARVRLWKPMIEDMYKEETKPESSDGNNK 375
>Os03g0124000 POX domain containing protein
Length = 591
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 321 QRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVS 380
QRL+ +L ML+ +D++Y + +++++ F + AG ++ A R +S
Sbjct: 210 QRLKDKLYIMLEEVDRRYRRYCEQMRAVAGGFEAV-------AGERAAGAYTAVAARTIS 262
Query: 381 AMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERER-SWESAFIQKHWAVQQLRR 439
+ LR I ++ + G S++ T G+ R I+ H ++Q +
Sbjct: 263 RHFRSLRDGIVAQLQAARKALGEK---DVSAAGTTRGQTPRLRVIDQCIRHHKSLQGVAA 319
Query: 440 GEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINAR 499
+ WRPQRGLP+++V +L+AW+FE+FL PYP D +K +LA ++GLSR+QVSNWFINAR
Sbjct: 320 MDSHPWRPQRGLPDRAVTILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAR 379
Query: 500 VRLWKPMIEEM-CEELK 515
VRLWKPM+EEM EE+K
Sbjct: 380 VRLWKPMVEEMYVEEMK 396
>Os05g0455200 Similar to Homeodomain protein JUBEL2
Length = 580
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 122/221 (55%), Gaps = 25/221 (11%)
Query: 318 ASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHR 377
A Q ++ L+++++ + ++Y Q ++Q+ + F T+ AG+S+++ A A R
Sbjct: 225 AEQQWRKTRLISLMEDVCKRYRQYYQQLQAVVSSFETV-------AGLSNAAPFASMALR 277
Query: 378 AVSAMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVTGGERERSWE-----SAFIQKHW 432
+S + L+ I ++ + + G E ++ ++F Q H
Sbjct: 278 TMSKHFKYLKGIILNQLRNTGKGATKDGLGKEDTTNFGLMGGGAGLLRGNNVNSFSQPH- 336
Query: 433 AVQQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVS 492
WRPQRGLPE++V+VL+AW+FE+FL PYP DS+K+MLA ++GL+RNQVS
Sbjct: 337 ----------NIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVS 386
Query: 493 NWFINARVRLWKPMIEEM--CEELKRSSGGGAGNQALAMEH 531
NWFINARVRLWKPM+EE+ E + L+M+H
Sbjct: 387 NWFINARVRLWKPMVEEIHNLEMRQLQKNPSLDKNQLSMQH 427
>Os01g0848400 Acid phosphatase/vanadium-dependent haloperoxidase family protein
Length = 612
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 32/204 (15%)
Query: 318 ASAQRLRSELLTMLQLMDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHR 377
A Q +++L++M++ + ++Y Q ++Q+ A F T+ AG S+++ A A R
Sbjct: 254 AEQQWKKTKLISMMEEVCKRYRQYYQQVQAVMASFETV-------AGFSNAAPFAALALR 306
Query: 378 AVSAMYHGLRRRIAGEIMSXXXXXGRPCRGGESSSAVT-----------GGERERSWESA 426
A++ + L+ I ++ + + G + G +R S SA
Sbjct: 307 AMAKHFKCLKSMILNQLRNTSNKVA--VKDGLNKEIAVFGLAGGSSGGAGLQRANS-ASA 363
Query: 427 FIQKHWAVQQLRRGEQQCWRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGL 486
F Q H WRPQRGLPE++V+VL+AW+FE+FL PYP D +K+MLA ++GL
Sbjct: 364 FGQPH-----------NIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGL 412
Query: 487 SRNQVSNWFINARVRLWKPMIEEM 510
+RNQVSNWFINARVRLWKPM+EE+
Sbjct: 413 TRNQVSNWFINARVRLWKPMVEEI 436
>Os12g0160500 Similar to BEL1-related homeotic protein 5
Length = 417
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 63/66 (95%)
Query: 445 WRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARVRLWK 504
WRPQRGLPE++V+VL+AW+FE+FL PYPKDS+K MLA ++GL+R+QVSNWFINARVRLWK
Sbjct: 117 WRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWK 176
Query: 505 PMIEEM 510
PM+EEM
Sbjct: 177 PMVEEM 182
>Os03g0680700 Similar to Knotted1-interacting protein
Length = 346
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 57/66 (86%)
Query: 445 WRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARVRLWK 504
WRP RGLPE +V VL+AW+F++FL PYP D+EK MLA +GLSR Q+SNWFINARVRLWK
Sbjct: 260 WRPLRGLPEDAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWK 319
Query: 505 PMIEEM 510
PM+EEM
Sbjct: 320 PMVEEM 325
>AK064665
Length = 188
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 58/69 (84%)
Query: 445 WRPQRGLPEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFINARVRLWK 504
WRP RGLPE +V VL+AW+F++FL PYP D+EK MLA +GLSR Q+SNWFINARVRLWK
Sbjct: 102 WRPLRGLPEDAVGVLRAWLFDHFLHPYPNDNEKLMLAVATGLSRTQISNWFINARVRLWK 161
Query: 505 PMIEEMCEE 513
PM+EEM +
Sbjct: 162 PMVEEMYND 170
>Os03g0732100 Similar to Homeodomain protein JUBEL1
Length = 631
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 334 MDQKYNQCLDEIQSTTARFNTLTHATARAAGMSSSSICAPFAHRAVSAMYHGLRRRIAGE 393
+D++YN D++Q F+++ G +++ A +A+S + L+ IA +
Sbjct: 477 VDRRYNHYCDQMQMVVNFFDSVM-------GFGAATPYTALAQKAMSRHFRCLKDAIAAQ 529
Query: 394 IMSXXXXXGRPCRGGESSSAVTGGE--RERSWESAFIQKHWAVQQLRRGEQQCWRPQRGL 451
+ G G + S +T GE R R+ + + Q+ A + EQ+ WRPQRGL
Sbjct: 530 LRGTCEALGEKDAG--TGSGLTKGETPRLRAIDQSLRQQR-AFHHMGIMEQEAWRPQRGL 586
Query: 452 PEKSVAVLKAWMFENFLRPYPKDSEKEMLAARSGLSRNQVSNWFI 496
PE+SV +L++W+FE+FL PYP D++K +LA ++GLSRNQ+ + I
Sbjct: 587 PERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQMHIYVI 631
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.128 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,482,068
Number of extensions: 606758
Number of successful extensions: 2119
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 2110
Number of HSP's successfully gapped: 17
Length of query: 539
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 433
Effective length of database: 11,501,117
Effective search space: 4979983661
Effective search space used: 4979983661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)