Os03g0680700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Knotted1-interacting protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0680700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Knotted1-interacting protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.51 | 0.816 | 3.01 | -0.221 | 0.86 | -0.724 | -2.07 | 1.62 | 0.113 | 11.3 | 0.7199 | 17 | -- | -- |
| 303.4 | 0.811 | 3.02 | -0.313 | 0.87 | -0.73 | -0.156 | -- | 0.106 | 11.8 | 0.64 | 33 | -- | -- |
| 305.43 | 0.82 | 3.02 | -0.326 | 0.753 | -0.626 | -- | -0.0366 | 0.0937 | 11.5 | 0.7199 | 17 | -- | -- |
| 303.5 | 0.811 | 3.02 | -0.325 | 0.881 | -0.739 | -- | -- | 0.102 | 11.8 | 0.6901 | 33 | -- | -- |
| 313.14 | 0.824 | 3.04 | -0.37 | -- | -0.142 | -- | -0.0771 | 0.0771 | -- | 0.6901 | 9 | -- | -- |
| 313.54 | 0.83 | 3.04 | -0.36 | 0.0286 | -- | -0.838 | -- | 0.0779 | 6.73 | -- | -- | -- | -- |
| 315.32 | 0.832 | 3.04 | -0.374 | 0.0263 | -- | -- | -- | 0.0804 | 7.71 | -- | -- | -- | -- |
| 313.13 | 0.824 | 3.04 | -0.368 | -- | -0.14 | -- | -- | 0.0801 | -- | 0.69 | 9 | -- | -- |
| 306.3 | 0.815 | 3.01 | -- | 0.88 | -0.74 | -- | -- | 0.134 | 11.8 | 0.6922 | 33 | -- | -- |
| 315.36 | 0.83 | 3.04 | -0.373 | -- | -- | -- | -- | 0.0807 | -- | -- | -- | -- | -- |
| 319 | 0.835 | 3.03 | -- | 0.0244 | -- | -- | -- | 0.122 | 8.79 | -- | -- | -- | -- |
| 316.76 | 0.829 | 3.04 | -- | -- | -0.125 | -- | -- | 0.103 | -- | 0.69 | 9 | -- | -- |
| 319.04 | 0.834 | 3.03 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.84 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 2 |
| 3 | 293.36 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 11 | 294.02 | temperature | 20.0 | 30 | < th | dose independent | rect. | 15 | 5 |
| 15 | 294.07 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 17 | 294.10 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 19 | 294.33 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 9 |
| 42 | 294.46 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 47 | 294.53 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 60 | 294.76 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 64 | 294.80 | temperature | 20.0 | 30 | < th | dose independent | rect. | 12 | 8 |
| 83 | 295.22 | temperature | 20.0 | 30 | < th | dose independent | rect. | 17 | 4 |
| 88 | 295.27 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 17 | 4 |
| 92 | 295.34 | temperature | 20.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 103 | 295.40 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 106 | 295.43 | wind | 9.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 157 | 296.17 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 209 | 296.96 | wind | 7.0 | 10 | > th | dose dependent | rect. | 19 | 8 |
| 216 | 297.05 | wind | 9.0 | 30 | < th | dose independent | sin | 6 | NA |
| 240 | 297.36 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 241 | 297.36 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 8 |
| 242 | 297.36 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 13 |
| 244 | 297.36 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 259 | 297.47 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 260 | 297.48 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 3 |
| 265 | 297.48 | wind | 5.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 267 | 297.48 | wind | 7.0 | 10 | > th | dose dependent | rect. | 19 | 3 |
| 282 | 297.59 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 1 |
| 301 | 297.99 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 308 | 298.04 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 309 | 298.05 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 324 | 298.05 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 341 | 298.09 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |
| 343 | 298.09 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 345 | 298.11 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 17 |
| 346 | 298.11 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 385 | 298.47 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 480 | 299.96 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 522 | 300.32 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 526 | 300.33 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 536 | 300.35 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 537 | 300.35 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 541 | 300.35 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 542 | 300.35 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 588 | 300.44 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 633 | 300.54 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 635 | 300.57 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 657 | 300.71 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 667 | 300.80 | radiation | 1.0 | 30 | < th | dose independent | rect. | 15 | 16 |
| 746 | 301.18 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 797 | 301.54 | wind | 5.0 | 10 | > th | dose independent | rect. | 17 | 20 |
| 798 | 301.55 | wind | 5.0 | 10 | > th | dose dependent | rect. | 17 | 20 |
| 868 | 301.92 | wind | 5.0 | 90 | > th | dose dependent | rect. | 18 | 2 |
| 886 | 302.07 | radiation | 1.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 901 | 302.12 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 15 |
| 902 | 302.12 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 909 | 302.16 | wind | 9.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 942 | 302.31 | wind | 7.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 957 | 302.36 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 18 |
| 962 | 302.37 | wind | 9.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 993 | 302.47 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |