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Os03g0124000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : POX domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0196) R2 : 0.735
β1 : 1.96 (0.0716) R2dD : 0.452 R2D : 0.256
β2 : 0.88 (0.0489) R2dC : 0.189 R2C : 0.13
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.778 (0.0418) R2dN8 : 0.27 R2N8 : 0.0943
σ : 0.368
deviance : 61.72
__
_____
C
peak time of C : 8.73
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.69 0.354 13.6 2.1 0.907 0.304 -0.506 -0.186 0.847 8.94 20.51 76 -- --
56.86 0.351 13.6 2.07 0.906 0.317 -0.476 -- 0.842 8.95 20.5 76 -- --
57.51 0.353 13.6 2.07 0.902 0.306 -- -0.122 0.846 9.02 20.5 93 -- --
57.58 0.353 13.6 2.06 0.908 0.321 -- -- 0.841 9.04 20.5 68 -- --
84.56 0.428 13.6 2.33 -- 0.608 -- -1.69 1.05 -- 25.8 695 -- --
60.91 0.366 13.6 1.98 0.88 -- -0.505 -- 0.777 8.64 -- -- -- --
61.72 0.368 13.6 1.96 0.88 -- -- -- 0.778 8.73 -- -- -- --
85.32 0.43 13.6 2.18 -- 0.662 -- -- 0.973 -- 25.9 697 -- --
158.89 0.587 13.7 -- 0.89 -0.687 -- -- 0.514 8.53 17.8 37 -- --
105.55 0.48 13.6 1.97 -- -- -- -- 0.785 -- -- -- -- --
163.4 0.598 13.6 -- 0.886 -- -- -- 0.559 8.57 -- -- -- --
200.12 0.659 13.7 -- -- -0.696 -- -- 0.549 -- 18.1 92 -- --
207.47 0.672 13.7 -- -- -- -- -- 0.567 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.20 temperature 10.0 270 > th dose dependent rect. 17 8
2 49.27 radiation 20.0 43200 < th dose dependent rect. 19 9
3 49.46 temperature 30.0 270 < th dose dependent rect. 23 7
8 50.07 temperature 10.0 270 > th dose dependent rect. 18 16
10 50.23 humidity 50.0 14400 > th dose independent rect. 19 9
13 50.39 atmosphere 1015.0 270 < th dose independent rect. 16 9
16 50.51 temperature 30.0 270 < th dose dependent rect. 1 4
18 50.54 wind 9.0 270 < th dose independent rect. 16 9
20 50.59 temperature 30.0 90 < th dose dependent rect. 1 6
21 50.60 precipitation 0.1 270 < th dose independent rect. 16 9
22 50.60 precipitation 0.1 270 < th dose dependent rect. 16 9
23 50.61 wind 1.0 270 > th dose independent rect. 1 15
24 50.64 radiation 30.0 270 < th dose independent rect. 16 9
27 50.67 temperature 10.0 270 > th dose independent rect. 16 9
29 50.67 temperature 10.0 270 > th dose independent rect. 1 15
30 50.67 atmosphere 1015.0 270 < th dose independent rect. 1 15
34 50.91 radiation 1.0 270 < th dose independent sin 7 NA
35 50.92 radiation 40.0 270 < th dose dependent rect. 15 10
37 50.94 wind 9.0 270 < th dose independent rect. 1 15
39 50.97 atmosphere 995.0 270 > th dose independent rect. 1 15
47 51.09 precipitation 0.1 270 < th dose independent rect. 1 15
48 51.09 precipitation 0.1 270 < th dose dependent rect. 1 15
49 51.13 radiation 1.0 270 < th dose dependent sin 6 NA
56 51.27 humidity 50.0 270 > th dose independent rect. 16 9
59 51.32 temperature 15.0 270 > th dose independent rect. 6 5
64 51.36 temperature 20.0 90 > th dose independent rect. 18 18
68 51.40 wind 1.0 270 > th dose independent rect. 1 4
78 51.45 temperature 20.0 90 > th dose independent rect. 20 16
93 51.53 atmosphere 1015.0 270 < th dose independent rect. 6 19
94 51.54 atmosphere 1015.0 270 < th dose independent rect. 18 17
98 51.56 radiation 1.0 1440 < th dose dependent rect. 19 9
102 51.58 temperature 10.0 1440 > th dose independent rect. 19 9
105 51.58 temperature 30.0 1440 < th dose independent rect. 19 9
109 51.58 humidity 50.0 1440 > th dose independent rect. 19 9
111 51.58 atmosphere 995.0 1440 > th dose independent rect. 19 9
112 51.58 radiation 1.0 1440 < th dose independent rect. 19 9
132 51.58 temperature 10.0 1440 > th dose independent rect. 4 15
139 51.59 radiation 1.0 270 > th dose independent rect. 6 5
141 51.62 temperature 20.0 10 > th dose independent rect. 21 15
149 51.68 temperature 30.0 90 < th dose dependent rect. 3 4
152 51.70 temperature 15.0 270 > th dose independent rect. 5 7
153 51.70 wind 1.0 270 > th dose independent rect. 16 9
167 51.73 wind 1.0 10 > th dose independent rect. 1 6
171 51.77 radiation 1.0 270 > th dose independent sin 6 NA
172 51.77 radiation 1.0 270 < th dose dependent rect. 1 12
181 51.80 temperature 20.0 270 > th dose independent rect. 17 8
185 51.81 radiation 1.0 270 < th dose independent rect. 1 12
190 51.82 radiation 1.0 270 < th dose independent rect. 1 10
194 51.84 wind 9.0 270 < th dose independent rect. 6 5
195 51.84 precipitation 0.1 270 < th dose independent rect. 6 5
196 51.84 temperature 30.0 90 < th dose independent rect. 18 9
198 51.84 precipitation 0.1 270 < th dose dependent rect. 6 5
200 51.85 atmosphere 995.0 270 > th dose independent rect. 16 9
218 51.88 wind 7.0 270 < th dose independent rect. 18 17
223 51.89 atmosphere 995.0 270 > th dose independent rect. 6 5
224 51.89 atmosphere 1015.0 270 < th dose independent rect. 6 5
226 51.89 temperature 10.0 270 > th dose independent rect. 11 19
233 51.91 humidity 50.0 270 > th dose independent rect. 6 5
240 51.96 wind 1.0 270 > th dose independent rect. 11 19
245 51.98 humidity 50.0 270 > th dose independent rect. 1 14
258 52.00 temperature 10.0 90 > th dose independent rect. 3 15
259 52.00 atmosphere 1015.0 90 < th dose independent rect. 3 15
267 52.03 atmosphere 995.0 90 > th dose independent rect. 18 9
269 52.03 temperature 10.0 10 > th dose dependent rect. 21 15
271 52.04 wind 9.0 270 < th dose independent rect. 11 19
280 52.07 atmosphere 995.0 270 > th dose independent rect. 11 19
288 52.10 radiation 1.0 270 < th dose independent rect. 1 5
290 52.10 wind 9.0 270 < th dose dependent rect. 6 5
312 52.16 wind 1.0 270 > th dose independent rect. 12 17
313 52.16 precipitation 0.1 270 < th dose independent rect. 18 17
315 52.16 precipitation 0.1 270 < th dose dependent rect. 18 17
317 52.18 radiation 1.0 270 < th dose dependent rect. 1 5
325 52.19 atmosphere 1015.0 270 < th dose independent rect. 6 17
327 52.19 radiation 1.0 10 > th dose dependent rect. 7 5
329 52.20 temperature 20.0 90 > th dose independent rect. 7 20
341 52.26 temperature 20.0 90 > th dose independent rect. 23 13
346 52.27 wind 1.0 270 > th dose independent rect. 3 2
359 52.30 temperature 10.0 270 > th dose independent rect. 11 7
360 52.30 atmosphere 1015.0 270 < th dose independent rect. 11 7
373 52.33 wind 9.0 270 < th dose independent rect. 5 7
374 52.33 wind 9.0 90 < th dose independent rect. 3 15
375 52.33 precipitation 0.1 270 < th dose independent rect. 6 19
377 52.33 precipitation 0.1 270 < th dose dependent rect. 6 19
388 52.35 temperature 20.0 10 > th dose independent rect. 18 20
394 52.36 humidity 50.0 270 > th dose independent rect. 18 17
408 52.39 precipitation 0.1 270 < th dose independent rect. 5 7
411 52.39 precipitation 0.1 270 < th dose dependent rect. 5 7
412 52.39 wind 9.0 270 < th dose dependent rect. 16 9
417 52.40 wind 9.0 270 < th dose independent rect. 6 19
423 52.43 temperature 10.0 270 > th dose independent rect. 1 5
425 52.43 temperature 30.0 270 < th dose independent rect. 1 5
426 52.43 humidity 50.0 270 > th dose independent rect. 1 5
429 52.43 atmosphere 995.0 270 > th dose independent rect. 1 5
430 52.43 atmosphere 1015.0 270 < th dose independent rect. 1 5
431 52.43 radiation 20.0 270 < th dose independent rect. 1 5
435 52.43 wind 9.0 270 < th dose independent rect. 11 7
438 52.43 temperature 10.0 270 > th dose independent rect. 6 19
439 52.43 precipitation 0.1 270 < th dose independent rect. 11 19
441 52.43 precipitation 0.1 270 < th dose dependent rect. 11 19
443 52.44 wind 9.0 270 < th dose independent rect. 1 5
446 52.44 atmosphere 995.0 270 > th dose independent rect. 11 7
447 52.44 atmosphere 995.0 270 > th dose dependent rect. 1 5
461 52.47 atmosphere 995.0 270 > th dose independent rect. 5 7
462 52.47 atmosphere 1015.0 270 < th dose independent rect. 5 7
463 52.47 temperature 10.0 270 > th dose independent rect. 12 17
481 52.50 wind 1.0 10 > th dose independent rect. 7 7
484 52.50 temperature 30.0 270 < th dose dependent rect. 3 1
490 52.51 precipitation 0.1 90 < th dose independent rect. 3 15
493 52.51 precipitation 0.1 90 < th dose dependent rect. 3 15
500 52.53 wind 9.0 270 < th dose independent rect. 12 17
510 52.55 precipitation 0.1 270 < th dose independent rect. 11 7
515 52.55 precipitation 0.1 270 < th dose dependent rect. 11 7
518 52.56 wind 9.0 4320 < th dose independent rect. 4 4
522 52.56 wind 1.0 10 > th dose independent rect. 14 17
526 52.57 atmosphere 995.0 270 > th dose independent rect. 18 17
538 52.60 precipitation 0.1 270 < th dose independent rect. 1 5
544 52.60 wind 9.0 270 < th dose dependent rect. 7 3
545 52.60 precipitation 0.1 270 < th dose dependent rect. 1 5
579 52.63 wind 9.0 10 < th dose independent rect. 7 7
591 52.64 temperature 20.0 10 > th dose independent rect. 23 13
605 52.66 radiation 40.0 30 < th dose independent rect. 3 15
611 52.67 wind 9.0 4320 < th dose independent rect. 2 6
612 52.67 humidity 90.0 10 < th dose independent rect. 7 7
613 52.67 temperature 25.0 270 < th dose independent rect. 22 8
632 52.69 precipitation 0.1 270 < th dose independent rect. 6 16
645 52.69 precipitation 0.1 270 < th dose dependent rect. 6 16
671 52.73 humidity 90.0 90 < th dose independent rect. 7 5
672 52.73 radiation 1.0 10 > th dose independent rect. 7 7
680 52.74 radiation 30.0 90 < th dose dependent sin 6 NA
683 52.75 humidity 90.0 10 < th dose independent rect. 7 5
687 52.75 temperature 15.0 270 > th dose independent rect. 6 16
699 52.77 wind 9.0 10 < th dose independent rect. 14 17
700 52.77 wind 9.0 90 < th dose independent rect. 14 17
717 52.78 radiation 40.0 30 < th dose dependent rect. 3 15
723 52.79 temperature 10.0 90 > th dose independent rect. 14 17
730 52.80 radiation 40.0 90 < th dose independent rect. 13 18
751 52.84 precipitation 0.1 10 < th dose independent rect. 7 7
752 52.84 radiation 40.0 10 < th dose independent rect. 14 17
755 52.84 precipitation 0.1 10 < th dose dependent rect. 7 7
760 52.85 temperature 20.0 10 > th dose independent rect. 7 7
761 52.85 wind 9.0 270 < th dose independent rect. 6 16
770 52.86 wind 1.0 30 > th dose independent rect. 12 19
780 52.87 temperature 10.0 10 > th dose independent rect. 7 7
782 52.87 atmosphere 995.0 10 > th dose independent rect. 7 7
783 52.87 atmosphere 1015.0 10 < th dose independent rect. 7 7
784 52.87 temperature 10.0 10 > th dose independent rect. 14 17
806 52.89 atmosphere 1000.0 30 > th dose independent rect. 12 19
812 52.90 wind 1.0 270 > th dose independent rect. 11 7
842 52.91 humidity 50.0 270 > th dose independent rect. 6 19
844 52.91 radiation 40.0 10 < th dose independent rect. 12 19
851 52.92 temperature 10.0 270 > th dose independent rect. 22 8
853 52.92 humidity 50.0 270 > th dose independent rect. 22 8
856 52.92 atmosphere 995.0 270 > th dose independent rect. 22 8
857 52.92 radiation 20.0 270 < th dose independent rect. 22 8
870 52.93 atmosphere 1015.0 10 < th dose independent rect. 8 17
877 52.94 wind 9.0 270 < th dose independent rect. 22 8
904 52.96 temperature 30.0 270 < th dose independent rect. 6 5
908 52.96 radiation 40.0 10 < th dose dependent sin 5 NA
969 53.00 radiation 40.0 270 < th dose dependent rect. 22 8