BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0149100 Os11g0149100|AK102958
(366 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0149100 Protein of unknown function DUF296 domain cont... 540 e-154
Os12g0147000 Protein of unknown function DUF296 domain cont... 335 3e-92
Os10g0572900 Protein of unknown function DUF296 domain cont... 170 1e-42
Os02g0125200 HMG-I and HMG-Y, DNA-binding domain containing... 169 4e-42
Os02g0824300 HMG-I and HMG-Y, DNA-binding domain containing... 166 3e-41
Os08g0118000 HMG-I and HMG-Y, DNA-binding domain containing... 162 4e-40
Os04g0589900 HMG-I and HMG-Y, DNA-binding domain containing... 161 9e-40
Os09g0491708 HMG-I and HMG-Y, DNA-binding domain containing... 156 3e-38
Os08g0512400 HMG-I and HMG-Y, DNA-binding domain containing... 141 9e-34
Os06g0326000 HMG-I and HMG-Y, DNA-binding domain containing... 122 5e-28
Os04g0683900 HMG-I and HMG-Y, DNA-binding domain containing... 108 6e-24
Os03g0105700 Protein of unknown function DUF296 domain cont... 78 1e-14
Os02g0713700 Protein of unknown function DUF296 domain cont... 77 2e-14
Os02g0820800 HMG-I and HMG-Y, DNA-binding domain containing... 76 5e-14
Os09g0464300 75 9e-14
Os08g0563200 Protein of unknown function DUF296 domain cont... 72 8e-13
Os02g0448000 Protein of unknown function DUF296 domain cont... 70 2e-12
Os07g0235200 Protein of unknown function DUF296 domain cont... 65 8e-11
>Os11g0149100 Protein of unknown function DUF296 domain containing protein
Length = 366
Score = 540 bits (1390), Expect = e-154, Method: Compositional matrix adjust.
Identities = 288/343 (83%), Positives = 288/343 (83%)
Query: 24 LFRAADVTMTEAQEAAKEYQXXXXXXXXXXXXXXXXVAASGHGGEAAATPTMWSLGGEKM 83
LFRAADVTMTEAQEAAKEYQ VAASGHGGEAAATPTMWSLGGEKM
Sbjct: 24 LFRAADVTMTEAQEAAKEYQSSPSSPSTSPTPSPPPVAASGHGGEAAATPTMWSLGGEKM 83
Query: 84 PSEAAGDNGMQMSGHSEHAXXXXXXXXXXXXXXXXXQILATLGEWYALSAGGSFTPHVII 143
PSEAAGDNGMQMSGHSEHA QILATLGEWYALSAGGSFTPHVII
Sbjct: 84 PSEAAGDNGMQMSGHSEHASLSSGRRRGRPKGSGRRQILATLGEWYALSAGGSFTPHVII 143
Query: 144 VGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQLTGS 203
VGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQLTGS
Sbjct: 144 VGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQLTGS 203
Query: 204 FTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNSLKQHQRRM 263
FTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNSLKQHQRRM
Sbjct: 204 FTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNSLKQHQRRM 263
Query: 264 GLQQQXXXXXXXXXXXXXXXXXXXXXXISQAAPGTNGCHAPQVSSMHPQAHTGVMEHSAT 323
GLQQQ ISQAAPGTNGCHAPQVSSMHPQAHTGVMEHSAT
Sbjct: 264 GLQQQPSAAPALPPPMAPPPVLTAAMPISQAAPGTNGCHAPQVSSMHPQAHTGVMEHSAT 323
Query: 324 ASGAMNLNSSSSTGFTMVGWPVSSQSMGHRPSPDINVCLTPQE 366
ASGAMNLNSSSSTGFTMVGWPVSSQSMGHRPSPDINVCLTPQE
Sbjct: 324 ASGAMNLNSSSSTGFTMVGWPVSSQSMGHRPSPDINVCLTPQE 366
>Os12g0147000 Protein of unknown function DUF296 domain containing protein
Length = 387
Score = 335 bits (859), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/284 (70%), Positives = 212/284 (74%), Gaps = 13/284 (4%)
Query: 85 SEAAGDNG-MQMSGHSEHAXXXXXXXXXXXXXXXXXQILATLGEWYALSAGGSFTPHVII 143
S AGD+G MQ+SGH EHA QILA LGEWYALSAGGSFTPHVII
Sbjct: 95 SLGAGDSGSMQVSGHGEHAGLSSRRRRGRPKGSGRRQILANLGEWYALSAGGSFTPHVII 154
Query: 144 VGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQLTGS 203
V TGEDVA RIMSFSQKGPRS+CIL+ANGTISNV L+QPGSSGSTF+YEG FEILQLTGS
Sbjct: 155 VATGEDVAARIMSFSQKGPRSVCILAANGTISNVVLNQPGSSGSTFSYEGCFEILQLTGS 214
Query: 204 FTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNSLKQHQRRM 263
FT+AEEG RRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPN+LKQHQRRM
Sbjct: 215 FTIAEEGVRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNNLKQHQRRM 274
Query: 264 GLQQQXXXXXXXXXXXXXX---XXXXXXXXISQAAPGTNGCHAPQV--SSMHPQAHTGVM 318
GL Q ISQAAPG NGC +PQV SSM PQAH GV
Sbjct: 275 GLHPQPSAAPAFPAPMAPLHPPPVLTAAMPISQAAPGNNGCRSPQVSISSMPPQAHAGVE 334
Query: 319 EHSATASGAMNLN-SSSSTGFTMVGWP--VSSQSMGHRPSPDIN 359
+ + GAMNLN SSSSTGF MVGWP SSQSM HRPSPDIN
Sbjct: 335 Q----SRGAMNLNSSSSSTGFAMVGWPAAASSQSMVHRPSPDIN 374
>Os10g0572900 Protein of unknown function DUF296 domain containing protein
Length = 251
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 102/129 (79%), Gaps = 6/129 (4%)
Query: 125 LGEWYALSAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGS 184
LG W G +FTPH++ V GEDVA +IM+FSQ+GPR++CILSANG ISNV L QP +
Sbjct: 27 LGSW-----GIAFTPHILTVKAGEDVASKIMAFSQQGPRTVCILSANGAISNVTLRQPAT 81
Query: 185 SGSTFTYEGRFEILQLTGSFTMAEEGG-RRRTGGLSVSLAGPDGRVVGGVVAGMLRAASP 243
SG TYEGRFEI+ L+GSF +AE+G R RTGGLSV+LAG DGRV+GG VAGML AA+P
Sbjct: 82 SGGLVTYEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLMAATP 141
Query: 244 IQVIVGSFL 252
+QV+V SF+
Sbjct: 142 VQVVVASFI 150
>Os02g0125200 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 388
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Query: 122 LATLGEWYALSAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQ 181
L LGE A ++G +FTPH+I V GEDV +++SFSQ+GPR+ICILSANG ISNV L Q
Sbjct: 157 LGPLGELVACASGANFTPHIINVAAGEDVNMKVISFSQQGPRAICILSANGVISNVTLRQ 216
Query: 182 PGSSGSTFTYEGRFEILQLTGSFTMAEEGG-RRRTGGLSVSLAGPDGRVVGGVVAGMLRA 240
+ G T TYEGRFE+L L+GSFT + GG R R+GG+SVSLA DGRV+GG VAG+L A
Sbjct: 217 QDTLGGTVTYEGRFELLSLSGSFTPTDSGGTRSRSGGMSVSLAATDGRVIGGGVAGLLVA 276
Query: 241 ASPIQVIVGSFLPN 254
ASP+QV+VGSFLP+
Sbjct: 277 ASPVQVVVGSFLPS 290
>Os02g0824300 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 394
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
Query: 120 QILATLGEWYALSAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVAL 179
Q LA+LG+W+ S G FTPHVII+ GEDVA RIMSFSQ+GPR++CI+SA G +S L
Sbjct: 193 QQLASLGKWFLGSVGTGFTPHVIIISPGEDVAARIMSFSQQGPRAVCIISATGAVSTATL 252
Query: 180 SQPGSSGSTFTYEGRFEILQLTGSFTMAEEGGRR-RTGGLSVSLAGPDGRVVGGVVAGML 238
Q +SG TYEGRFEIL L+GS+ + EEGG R R+GGL ++L GPD RV+GG V G+L
Sbjct: 253 HQDSNSGGVVTYEGRFEILCLSGSYLVIEEGGSRTRSGGLCIALCGPDHRVIGGSVGGVL 312
Query: 239 RAASPIQVIVGSFLPNSLKQHQRR 262
AA +QVIVGSF+ K+++ +
Sbjct: 313 TAAGTVQVIVGSFMYGGTKKNKAK 336
>Os08g0118000 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 372
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 111/141 (78%), Gaps = 2/141 (1%)
Query: 124 TLGEWYALSAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPG 183
++GE A SAG +FTPH+I V GEDV +++SFSQ+GPR+ICILSANG ISNV L QP
Sbjct: 155 SIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPD 214
Query: 184 SSGSTFTYEGRFEILQLTGSFTMAEEGG-RRRTGGLSVSLAGPDGRVVGGVVAGMLRAAS 242
SSG T TYEGRFE+L L+GSF E G R R+GG+SVSLA PDGRVVGG VAG+L AAS
Sbjct: 215 SSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAAS 274
Query: 243 PIQVIVGSFLPN-SLKQHQRR 262
P+Q++VGSFLP+ ++Q ++
Sbjct: 275 PVQIVVGSFLPSYQMEQKNKK 295
>Os04g0589900 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 379
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
Query: 132 SAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTY 191
S+G SFTPH+I V EDVA +IM+FSQ+GPR+ CI+SANG + L QP +SG TY
Sbjct: 165 SSGTSFTPHIITVKPNEDVASKIMAFSQQGPRTTCIISANGALCTATLRQPATSGGIVTY 224
Query: 192 EGRFEILQLTGSFTMAEEGG-RRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGS 250
EG F+IL L+GSF +AE+G R RTGGLSV+LAG DGR+VGG VAGML AA+P+QV+VGS
Sbjct: 225 EGHFDILSLSGSFLLAEDGDTRSRTGGLSVALAGSDGRIVGGCVAGMLMAATPVQVVVGS 284
Query: 251 FLPNSLK---QHQRR 262
F+ K +H +R
Sbjct: 285 FIAEGKKGKEEHLKR 299
>Os09g0491708 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 359
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
Query: 132 SAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTY 191
SAG FTPHVI V GEDV+ +IMSFSQ G R +C+LSANG ISNV L Q +SG T TY
Sbjct: 168 SAGAGFTPHVIFVKAGEDVSAKIMSFSQHGTRGVCVLSANGAISNVTLRQAATSGGTVTY 227
Query: 192 EGRFEILQLTGSFTMAEEGGRR-RTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGS 250
EGRFEIL L+GSF ++E GG R RTGGLSVSLAGPDGRV+GG VAG+L AASP+Q++VGS
Sbjct: 228 EGRFEILSLSGSFLLSENGGHRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQIVVGS 287
Query: 251 F 251
F
Sbjct: 288 F 288
>Os08g0512400 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 292
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
Query: 132 SAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTY 191
SAG FTPHVI V GEDV+ +IMSF+Q G R++C+LSANG ISNV L Q +SG T TY
Sbjct: 99 SAGVGFTPHVITVLAGEDVSAKIMSFAQHGNRAVCVLSANGAISNVTLRQTATSGGTVTY 158
Query: 192 EGRFEILQLTGSFTMAEEGGRR-RTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGS 250
EGRFEIL L+GSF + + GG+R RTGGLSVSLAGPDGR++GG VAG+L AA+P+Q++VGS
Sbjct: 159 EGRFEILSLSGSFLLTDHGGQRSRTGGLSVSLAGPDGRLLGGGVAGLLIAATPVQIVVGS 218
Query: 251 F 251
F
Sbjct: 219 F 219
>Os06g0326000 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 378
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 94/129 (72%), Gaps = 3/129 (2%)
Query: 137 FTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSG-STFTYEGRF 195
P VI V GEDV R+MSF++ G ++C+LSANG +SN+ L Q GSSG +T YEG F
Sbjct: 200 LKPSVITVQVGEDVVSRVMSFTKNG-WAVCVLSANGAVSNMTLRQAGSSGATTVNYEGHF 258
Query: 196 EILQLTGSFTMAEEGG-RRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPN 254
EIL L+GS+ ++E G R GGLSVSLAGPDGRV+GG VAG L AA+P+QV++GSFL +
Sbjct: 259 EILSLSGSYLLSESVGLSSRAGGLSVSLAGPDGRVLGGGVAGPLNAATPVQVVIGSFLAD 318
Query: 255 SLKQHQRRM 263
K H++ M
Sbjct: 319 VKKGHKQAM 327
>Os04g0683900 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 419
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 88/150 (58%), Gaps = 14/150 (9%)
Query: 126 GEWYALSAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSS 185
G ++ SAG SFTPH+I EDVAG+I++F+ R++C+LSA G++S V L P
Sbjct: 207 GNAFSGSAGTSFTPHIITASPSEDVAGKIVAFANHSSRAVCVLSATGSVSRVVLRHPADG 266
Query: 186 G-----------STFTYEGRFEILQLTGSFTMAEEGGRRRTGGLSVSLAGPDGRVVGGVV 234
+ YEG +EIL ++G + + EG ++ GLSV+L P+ ++GGV+
Sbjct: 267 AMSRVHASSHYKNPAIYEGLYEILSMSGCYNLMNEG---QSDGLSVTLCSPERHIIGGVL 323
Query: 235 AGMLRAASPIQVIVGSFLPNSLKQHQRRMG 264
G L AAS +QV++GSF+ K ++ G
Sbjct: 324 GGALVAASTVQVVLGSFVQGGSKPKSKKAG 353
>Os03g0105700 Protein of unknown function DUF296 domain containing protein
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 135 GSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGR 194
G PH++ + GE++ +I + S+ R IC+LS G + L SSG T ++G
Sbjct: 100 GGLQPHLLQIDAGEEIIPKITALSKSNGRVICVLSVLGAVQEATLLL--SSGVTSYHKGP 157
Query: 195 FEILQLTGSFTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSF 251
EI++L GS + G L V+LA D V+GGV+ G L+AA+P+QV+V SF
Sbjct: 158 LEIIRLFGSILTPND-----QGCLRVTLASGDSSVIGGVITGPLKAATPVQVVVASF 209
>Os02g0713700 Protein of unknown function DUF296 domain containing protein
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 140 HVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSS--GSTF-TYEGRFE 196
HV+ V G DV + ++++ R +C+LS G + NVAL QPG+S GS T GRFE
Sbjct: 129 HVLEVAGGADVVDCVAEYARRRGRGVCVLSGGGAVVNVALRQPGASPPGSMVATLRGRFE 188
Query: 197 ILQLTGSFTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSF 251
IL LTG T+ GL+V L+G G+V+GG V G L AA P+ ++ SF
Sbjct: 189 ILSLTG--TVLPPPAPPGASGLTVFLSGGQGQVIGGSVVGPLVAAGPVVLMAASF 241
>Os02g0820800 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 266
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
Query: 140 HVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQ 199
HV+ V G DVA I FS++ R +C+LS GT++NVAL QP + G+ GRFEIL
Sbjct: 88 HVMEVAGGADVADAIAQFSRRRQRGVCVLSGAGTVANVALRQPSAPGAVVALHGRFEILS 147
Query: 200 LTGSFT--MAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSF 251
LTG+F A G + GL+V LAG G+VVGG V G L AA P+ VI +F
Sbjct: 148 LTGTFLPGPAPPG----STGLTVYLAGGQGQVVGGSVVGSLIAAGPVMVIASTF 197
>Os09g0464300
Length = 334
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 136 SFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQP-----GSSGSTFT 190
+ PHVI + G DVA + FS + IC+L+ G ++NV+L P GS+ +
Sbjct: 110 AMRPHVIEIPGGRDVAEALARFSSRRNLGICVLAGTGAVANVSLRHPSPGVPGSAPAAIV 169
Query: 191 YEGRFEILQLTGSF-----TMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGML 238
+ GR+EIL L+ +F + GLS+SLAGP G++VGG VAG L
Sbjct: 170 FHGRYEILSLSATFLPPAMSSVAPQAAVAAAGLSISLAGPHGQIVGGAVAGPL 222
>Os08g0563200 Protein of unknown function DUF296 domain containing protein
Length = 235
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 140 HVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQ 199
HV+ V G DVA I F+++ R +C+LS GT+++VAL QP + + GRFEIL
Sbjct: 65 HVMEVAGGADVAESIAHFARRRQRGVCVLSGAGTVTDVALRQPAAPSAVVALRGRFEILS 124
Query: 200 LTGSFT--MAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNSLK 257
LTG+F A G + GL+V LAG G+VVGG V G L AA P+ VI +F + +
Sbjct: 125 LTGTFLPGPAPPG----STGLTVYLAGGQGQVVGGSVVGTLTAAGPVMVIASTFANATYE 180
Query: 258 QHQRRMGLQQQ 268
R+ L Q+
Sbjct: 181 ----RLPLDQE 187
>Os02g0448000 Protein of unknown function DUF296 domain containing protein
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 140 HVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQ 199
HV+ V G D++ I +F+++ R +C+LS GT++NV L QP S G+ GRFEIL
Sbjct: 127 HVMEVAGGCDISESITTFARRRQRGVCVLSGAGTVTNVTLRQPASQGAVVALHGRFEILS 186
Query: 200 LTGSFTMAEEGGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSF 251
L+GSF GL+V LAG G+VVGG V G L AA P+ ++ SF
Sbjct: 187 LSGSFLPPP--APPEATGLTVYLAGGQGQVVGGSVVGALTAAGPVVIMAASF 236
>Os07g0235200 Protein of unknown function DUF296 domain containing protein
Length = 189
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 154 IMSFSQKGPRSICILSANGTISNVALSQPGSSGSTFTYEGRFEILQLTGSFTMAEEGGRR 213
I F+++ R IC+LS +++VAL QP + G+ GRFEIL LTG+F G
Sbjct: 33 IAHFARRQRRGICVLSRADAVTDVALRQPAAPGAVVALRGRFEILSLTGTFLPGP--GPP 90
Query: 214 RTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSF 251
+ L+V LAG G+VV G L AA P+ VI +F
Sbjct: 91 GSTRLTVYLAGGQGQVV-----GTLTAAGPVMVIASTF 123
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.127 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,714,923
Number of extensions: 407490
Number of successful extensions: 1066
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 1024
Number of HSP's successfully gapped: 26
Length of query: 366
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 264
Effective length of database: 11,709,973
Effective search space: 3091432872
Effective search space used: 3091432872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 157 (65.1 bits)