BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0363600 Os10g0363600|AK111523
(475 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0363600 Cyclin-like F-box domain containing protein 967 0.0
Os02g0574900 Cyclin-like F-box domain containing protein 514 e-146
Os10g0409900 Cyclin-like F-box domain containing protein 140 2e-33
Os07g0153400 Cyclin-like F-box domain containing protein 135 5e-32
Os03g0167800 Cyclin-like F-box domain containing protein 134 1e-31
Os02g0202900 Cyclin-like F-box domain containing protein 110 2e-24
Os02g0504900 Cyclin-like F-box domain containing protein 98 1e-20
Os10g0388200 Cyclin-like F-box domain containing protein 94 3e-19
Os04g0619300 Cyclin-like F-box domain containing protein 81 1e-15
Os11g0602800 Galactose oxidase, central domain containing p... 74 2e-13
Os11g0246200 Cyclin-like F-box domain containing protein 74 2e-13
Os06g0655500 Cyclin-like F-box domain containing protein 72 1e-12
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/475 (100%), Positives = 475/475 (100%)
Query: 1 MGALLSSPNSKNQPWEHGEASKADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILAR 60
MGALLSSPNSKNQPWEHGEASKADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILAR
Sbjct: 1 MGALLSSPNSKNQPWEHGEASKADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILAR 60
Query: 61 MPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCG 120
MPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCG
Sbjct: 61 MPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCG 120
Query: 121 QWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAI 180
QWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAI
Sbjct: 121 QWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAI 180
Query: 181 GTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGV 240
GTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGV
Sbjct: 181 GTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGV 240
Query: 241 SKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGKL 300
SKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGKL
Sbjct: 241 SKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGKL 300
Query: 301 YVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEP 360
YVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEP
Sbjct: 301 YVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEP 360
Query: 361 STSSDRGKIKIYDPQEDAWKVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINI 420
STSSDRGKIKIYDPQEDAWKVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINI
Sbjct: 361 STSSDRGKIKIYDPQEDAWKVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINI 420
Query: 421 MQTDVLKPVELSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLNI 475
MQTDVLKPVELSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLNI
Sbjct: 421 MQTDVLKPVELSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLNI 475
>Os02g0574900 Cyclin-like F-box domain containing protein
Length = 460
Score = 514 bits (1325), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/477 (51%), Positives = 338/477 (70%), Gaps = 19/477 (3%)
Query: 1 MGALLSSPNSKNQPWEHGEASKADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILAR 60
MG+++SS N + + E S S+K++++S +IP LPDE+S QILAR
Sbjct: 1 MGSVVSSANINARSMDRHEKSGFGSNKRVKISTYECDS---FQRIIPTLPDELSFQILAR 57
Query: 61 MPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCG 120
+PR+ YL K+VS++WKAAIT EL ++R+ELG++EEWLY+LTK + KL A DP+
Sbjct: 58 LPRLYYLKLKLVSQAWKAAITSSELSQLRRELGLTEEWLYVLTKLEPNKLDCYALDPLFR 117
Query: 121 QWQRLPLMPGISHGGECKRGIPGLWLG--DLLSAGIRVSDVIRGWLGQRDSLDRLPFCGC 178
+WQRLP MP E W +++ + IR++D I+GW +R LD++PFCGC
Sbjct: 118 KWQRLPPMPSFVSEEESTGRTQSSWFQTWNVVGSSIRIADFIKGWFRRRYGLDQMPFCGC 177
Query: 179 AIGTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVG 238
++G +GC+YV GGFSR A+ CV+RY+P +N WQEVS M +GRAF KA+LL +KLYVVG
Sbjct: 178 SVGVADGCLYVFGGFSRAVALNCVFRYNPCLNVWQEVSPMISGRAFSKAALLQSKLYVVG 237
Query: 239 GVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGG 298
GVS+G+NGL PL+S EVFDP+TGIW E+P++PF KAQ LPTAFLA++LKPIATGM S+ G
Sbjct: 238 GVSRGRNGLLPLRSGEVFDPKTGIWSELPEMPFMKAQVLPTAFLADVLKPIATGMASYKG 297
Query: 299 KLYVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYAL 358
KLYVPQSLYSWPFF D+GGEI+DPE NSW M G+G+GWPARQAGTKL V++ +LY L
Sbjct: 298 KLYVPQSLYSWPFFFDIGGEIYDPELNSWETMADGLGDGWPARQAGTKLGIVVNEELYTL 357
Query: 359 EPSTSSDRGKIKIYDPQEDAWKVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKI 418
EPS+S D G+IK YD ++D WK + QVPV DF ++E P+LLAG GK+++I K+ ++ +
Sbjct: 358 EPSSSLDSGQIKRYDSEQDTWKTIVPQVPVHDFTDAEAPFLLAGLHGKVHVITKEANNNL 417
Query: 419 NIMQTDVLKPVELSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLNI 475
+MQ + +E N P+ +E +W ++ SKN +AELVSCQVL++
Sbjct: 418 QVMQAVLQNNIE-----NSPS---------EENIIWNILASKNFGSAELVSCQVLDV 460
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 196/463 (42%), Gaps = 96/463 (20%)
Query: 21 SKADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAI 80
S+ ++ R AP L+PGLPD++++ L R+PR+ + N ++V + W +
Sbjct: 68 SRGSRKERSRTQAP----------LLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLL 117
Query: 81 TGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECKRG 140
+G Y +RK G++EEW+Y+ + +GK+ W+AFDP+ W+ LP +P
Sbjct: 118 SGNYYYSLRKRNGMAEEWVYVFKRDREGKISWHAFDPLHQLWKSLPPVPA---------- 167
Query: 141 IPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGC-IYVLGGFS--RGS 197
+ + L F GCA+ ++GC +Y+ GG RGS
Sbjct: 168 ---------------------------EYSEALGF-GCAV--LSGCYLYLFGGKDPLRGS 197
Query: 198 AMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFD 257
+ V+ Y+ N W M R F + ++NN LYV GG +G P SAEV+D
Sbjct: 198 MRRVVF-YNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLP--SAEVYD 254
Query: 258 PRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGKLYVPQ-SLYSWPFFVDVG 316
P W A +AE+ GM F G +Y + L V
Sbjct: 255 PNRNRW----------------ACVAEM----NNGMVPFIGVVYDGKWFLKGLDSHRQVT 294
Query: 317 GEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEPSTSSDRGKIKIYDPQE 376
E++ P +N W+ + M GW S +G LY+ S D K+++YDP
Sbjct: 295 SEVYLPSSNLWSTIDDEMVTGW------RNPSITFNGKLYS---SDCRDGCKLRVYDPNT 345
Query: 377 DAW-KVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINIMQTDVLKP---VELS 432
W K + +G E A L LN + V + ++I D+ P +E
Sbjct: 346 GTWAKFMDSKHHLGSSRAFE-----AAALVTLNGKLCIVRNNMSITLVDISDPTMSIETD 400
Query: 433 APGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLNI 475
+ T + NLW I +NL + ++ CQVL +
Sbjct: 401 SARMWETVARKGQHRSFVANLWSTIAGRNL-KSHIIHCQVLQV 442
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 145/346 (41%), Gaps = 73/346 (21%)
Query: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITG-VELYRVRKELGVSEEWLYMLT 103
LIPGLPD+ +L L R+P + ++V R W + + RK +G L+ L
Sbjct: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLA 112
Query: 104 -KSDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRG 162
GK+ W D W +P MP C RG
Sbjct: 113 FHRCTGKIQWKVLDLNYLTWHTIPAMP--CRDRACPRGF--------------------- 149
Query: 163 WLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMKC----VWRYDPFVNAWQEVSSM 218
GC +G + V GG S M C V +YD + N W ++ M
Sbjct: 150 --------------GCVAIPSDGTLLVCGGLV--SDMDCPLHLVLKYDVYKNRWTVMTRM 193
Query: 219 STGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALP 278
R+F +++ ++YV GG S + L SAEV DP G+W V + + A
Sbjct: 194 LAARSFFAGGVIDGRVYVAGGYSTDQ---FELNSAEVLDPVKGVWQPVASMGMNMA---- 246
Query: 279 TAFLAELLKPIATGMTSFGGKLYVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGW 338
++ G+LYV + +WPFF G+++DP+ + W MPVGM EGW
Sbjct: 247 -----------SSDSAVISGRLYVTEGC-AWPFFSSPRGQVYDPKIDRWEVMPVGMREGW 294
Query: 339 PARQAGTKLSAVIDGDLYALEPSTSSDRGKIKIYDPQEDAWKVAIG 384
T LS VID L+ + + +R K+K+YDP+ D+W G
Sbjct: 295 ------TGLSVVIDKHLFVI---SEYERMKVKVYDPETDSWDSVKG 331
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 199/465 (42%), Gaps = 96/465 (20%)
Query: 19 EASKADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKA 78
S++ ++ R AP L+PGLPD++++ L R+PR+ + N ++V + W
Sbjct: 62 RKSRSSHKERCRTQAP----------LLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNR 111
Query: 79 AITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECK 138
++G Y +RK+LG++EEW+++ + D K+ W+AFDPV W+ LP +P
Sbjct: 112 LLSGNYYYSLRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPA-------- 163
Query: 139 RGIPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGC-IYVLGGFS--R 195
+ + + F GCA+ ++GC +Y+ GG R
Sbjct: 164 -----------------------------EYSEAVGF-GCAV--LSGCYLYLFGGKDPVR 191
Query: 196 GSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEV 255
GS + V+ Y+ +N W M R + ++NN+LYV GG +G L+SAE
Sbjct: 192 GSMRRVVF-YNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQ--RTLRSAEF 248
Query: 256 FDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGKLYVPQ-SLYSWPFFVD 314
+DP W ++++E+ +TGM F G +Y + L
Sbjct: 249 YDPNRNRW----------------SYISEM----STGMVPFIGVVYDGKWFLKGLDSHRQ 288
Query: 315 VGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEPSTSSDRGKIKIYDP 374
V E++ P +N W+ M GW S +G LY+ E D K+++YD
Sbjct: 289 VVSEVYMPTSNVWSVTADEMVTGW------RNPSICFNGRLYSAE---CRDGCKLRVYDR 339
Query: 375 QEDAW-KVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINIMQTDVLKP---VE 430
+W + + +G+ E A L LN I + + ++I DV +E
Sbjct: 340 DTRSWTRFMDSRRHLGNSRAFE-----AAALVSLNGKICIIRNNMSITLVDVSNTPTVIE 394
Query: 431 LSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLNI 475
++ + NLW I +N ++ CQVL +
Sbjct: 395 INNAHMWDVFARKGQHRSFIANLWFTIAGRNF-KTHIIHCQVLQV 438
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 194/480 (40%), Gaps = 105/480 (21%)
Query: 21 SKADSSKKLRMSAPPL----SGGYDHPG-------------LIPGLPDEISLQILARMPR 63
+KA + LR S PL S G DH G LIPGLPD++++ L R+PR
Sbjct: 35 AKACAQPSLRASIHPLKPKRSPGRDHRGGGGAGGGGGRQCPLIPGLPDDLAVACLIRVPR 94
Query: 64 MGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTKSDDGKLVWNAFDPVCGQWQ 123
+ ++V R W + G Y +R+ LG++E+W+Y + + +G++ W+ DP W+
Sbjct: 95 GDHWKLRLVCRRWSRLLAGNYFYGLRRRLGLAEQWVYAVKRDGEGRVSWDVLDPARLAWR 154
Query: 124 RLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAIGTV 183
LP +PG G +AG GCA+ +
Sbjct: 155 ALPPVPGEYAG----------------AAGF----------------------GCAV--L 174
Query: 184 NGC-IYVLGGFS-RGSAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVV--GG 239
GC +Y+LGG R M+ V Y N W M R ++ N+LYV G
Sbjct: 175 GGCHLYLLGGSDPRRGPMRRVVFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEG 234
Query: 240 VSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGK 299
G G L+S EVFDP W V D+ S L P + + GG+
Sbjct: 235 CGVGGGGGGGLRSVEVFDPAKNRWSFVSDMAAS-------------LMPFVSAV--HGGR 279
Query: 300 LYVPQSLYSWPFFVDVGGEIFDPETNSW--AEMPVGMGEGWPARQAGTKLSAVIDGDLYA 357
YV + L + V +++ PE ++W A M GW SA + G LYA
Sbjct: 280 WYV-KGLGAQR---QVMSQVYSPEADAWSAAHELDAMVTGW------RSPSASLGGRLYA 329
Query: 358 LEPSTSSDRGKIKIYDPQEDAWKVAIGQVPVGDFAESECPYLLAGFL---GKLNLIIKDV 414
+ D +++ YD AW G+V G A S A + GKL ++ D+
Sbjct: 330 AD---CKDGCRLRAYDEAAGAWS---GRVDGGQHAGSSHAVEAAAMVALHGKLCVVRNDM 383
Query: 415 DSKINIMQTDVLKPVELSAPGNGPTCQNQQLSSEQETNLWKVIVSKNLAAAELVSCQVLN 474
++++ P + G G Q+ + L + + A ++ CQVL
Sbjct: 384 S--VSVVDVAAASPRWETVVGKG------QMKAFVANLLSAIAGGRGRAKNRVLHCQVLE 435
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 165/431 (38%), Gaps = 97/431 (22%)
Query: 22 KADSSKKLRMSAPPLSGGYDHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAIT 81
KA + K P+ + LIPGLP++++ LA +PR + VS+ W + +
Sbjct: 25 KAPTRAKYSQGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLE 84
Query: 82 GVELYRVRKELGVSEEWLYMLTKSDDGK-LVWNAFDPVCGQWQRLPLMPGISHGGECKRG 140
E VRKE+G EEW+Y+LT K W + LP MPG + G
Sbjct: 85 SKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAG----- 139
Query: 141 IPGLWLGDLLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMK 200
G+ V D G ++V+ G++ +
Sbjct: 140 -----------FGVVVLD--------------------------GKLFVIAGYAADHGKE 162
Query: 201 C----VWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVF 256
C V+RYD +N W E+S M+ R + +N +YV GG G NG + L S EV+
Sbjct: 163 CVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGF--GPNGDS-LSSVEVY 219
Query: 257 DPRTGIWVEVPDIPFSKAQALPTAFLAELLKPI-ATGMTSFGGKLYVPQSLYSWPF---- 311
D W + L +P SF GKLYV +
Sbjct: 220 DAEQNKWT----------------LIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTR 263
Query: 312 FVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEPSTSSDRGKIKI 371
FVDV ++P NSW E+ G AV+D L+ +E ++ + +
Sbjct: 264 FVDV----YNPNDNSWGEVKNGC--------VMVTAHAVLDKKLFCIE---WKNQRSLAV 308
Query: 372 YDPQEDAWKVAIGQVPVGDFAESECPYLLAGFLGKLNLIIKDVDSKINIMQTDVLKPV-- 429
++P +++W+ +VPV S + GKL L D + + D P
Sbjct: 309 FNPADNSWQ----KVPVPLTGSSSTRFCFGIHDGKLLLFSLDEEPCYKTLMYDPAAPTGS 364
Query: 430 -----ELSAPG 435
EL PG
Sbjct: 365 EWFTSELKPPG 375
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 161/405 (39%), Gaps = 100/405 (24%)
Query: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTK 104
LI GLP+E++LQ LAR+P + + +MV SW+A++ EL +VR ++ +E+ L +L
Sbjct: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
Query: 105 SDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWL 164
+ +W +DP+ +W LP+MP ++ ++ R
Sbjct: 65 EPEN--MWQLYDPLRDKWITLPVMPS------------------------QIRNIARF-- 96
Query: 165 GQRDSLDRLPFCGCAIGTVNGCIYVLGGFS-----------RGSAMKCVWRYDPFVNAWQ 213
+ +V G +YV+GG S R A VW YDP W
Sbjct: 97 --------------GVASVAGKLYVIGGGSDRVDPLTGDHDRIFASNEVWSYDPLCRLWV 142
Query: 214 EVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSK 273
+ + M RA L+ + V GG + + ++ AE+++P W +PD+ +
Sbjct: 143 QRAPMLVARAMFACCALDGNIIVAGGFTNCRKSIS---KAEIYNPEADTWEPLPDLRQAH 199
Query: 274 AQALPTAFLAELLKPIATGMTSFGGKLYVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVG 333
+ A +G+ G + + L + D G + E SW + P+
Sbjct: 200 SSA-------------CSGLVIKGKMHVLHKGLPTVQILED--GNAWAVEDYSWLQGPMA 244
Query: 334 MGEGWPARQAGTKLSAVIDGDLYALEPSTSSDRGKIKIYD-----PQEDAWKVAIGQVPV 388
M + G+LY L S + + D E ++ G + +
Sbjct: 245 M----------------VRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGMIGL 288
Query: 389 GDFAESECPYLLAGFL--GKLNLIIKDVDSKINIMQTDVLKPVEL 431
GD YL+ G + G N IK + S ++I+ +P L
Sbjct: 289 GDNI-----YLVGGVIGPGPRNQCIKPL-SDVDILNVTSERPTWL 327
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTK 104
PGL D+++ LA R Y + +++ + I LYR+R++ G+ E W+Y+
Sbjct: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLAC- 171
Query: 105 SDDGKLVWNAFDPVCGQWQRLPLMP-----------GISHGGEC---KRGIPGL--WLGD 148
+ W AFDP +W RLP MP ++ G + R GL W+ +
Sbjct: 172 ---SLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYTGLAIWMYN 228
Query: 149 LLSAGIRVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSR-GSAMKCVWRYDP 207
LL+ RGW R + LP C A G+ V GG + G +K Y+
Sbjct: 229 LLA---------RGW--SRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNS 277
Query: 208 FVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVP 267
W+ + M+ R ++ K YV+GGVS ++ L E ++ T W +
Sbjct: 278 ETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLT---CGEEYNLETRTWRRIH 334
Query: 268 DI 269
D+
Sbjct: 335 DM 336
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 93/236 (39%), Gaps = 23/236 (9%)
Query: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTK 104
LI + E+++ L PR Y ++RS+ + + +LYR+R+E + E +Y
Sbjct: 93 LIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCSCN 152
Query: 105 SDDGKLVWNAFDPVCGQWQRLPLMPGISHGGEC---------KRGIPGLWLGDLLSAGI- 154
L W+ FDP +W +P MP I EC G L G + A +
Sbjct: 153 V----LEWDGFDPCRQRWFNIPSMPPI----ECFTLADKESLAVGTNILVFGKKVEAHVV 204
Query: 155 -RVSDVIRGWLGQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQ 213
R S + W + P C + V GG + YD W
Sbjct: 205 LRYSLLSNSW--TTGDMMNSPRCLFGSASFGEKAIVAGGIGDNGTLSSAELYDSEAKTWT 262
Query: 214 EVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDI 269
+ SM+ R C ++ K YV+GG + N + L E FD G W +PD+
Sbjct: 263 TLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEI--LNCGEEFDLEKGTWRLIPDM 316
>Os11g0246200 Cyclin-like F-box domain containing protein
Length = 383
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 34/254 (13%)
Query: 41 DHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLY 100
+H LIPG+PD++++ LAR+P + + V R W++A R E G +E+ +Y
Sbjct: 19 EHVELIPGMPDDVAVDCLARVPHGAHRAMRRVCRGWRSAAATPAFAMARAEAGANEDLVY 78
Query: 101 ML-------------TKSDDGKLVWNA-------FDPVCGQWQRLPLMPGISHGGEC--- 137
+L +DG N+ ++ G+W+R P + +C
Sbjct: 79 LLQFANPAAAAAAAEEAKEDGDAPANSPAYGVAVYNVTTGEWRREKAAPPVPMFAQCAAV 138
Query: 138 --KRGIPGLWLGDLLS--AGIRVSDVIRG-WLGQRDSLDRLPFCGCAIGTVNGCIYVLGG 192
+ + G W + A + V D G W F CA G IYV GG
Sbjct: 139 GTRLAVLGGWDPETFEPVADVHVLDASTGVWRSAPPMRSARSFFACA--EAGGRIYVAGG 196
Query: 193 FSRG-SAMKCVWRYDPFVNAWQEVSSMSTGRAFCK--ASLLNNKLYVVGGVSKGKNGLAP 249
+ +A+K YD +AW + MS R C A++ ++ V G + G
Sbjct: 197 HDKHKNALKTAEAYDAVADAWDPLPDMSEERDECDGMATVAGDRFLAVSGYRTARQG-GF 255
Query: 250 LQSAEVFDPRTGIW 263
+ AE FDP W
Sbjct: 256 ERDAEWFDPAARAW 269
>Os06g0655500 Cyclin-like F-box domain containing protein
Length = 384
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 184 NGCIYVLGGFSRG--SAMKCVWRYDPFVNAWQEVSSMSTGRAFCKASLLNNKLYVVGGVS 241
G IYV+GG G A++ V Y N W+E + M T R + A + +L V G
Sbjct: 136 RGEIYVIGGVVEGGDKAVRSVAVYSAARNGWEEAAGMGTARGYMAAGEVGGRLVVAG--- 192
Query: 242 KGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAELLKPIATGMTSFGGKLY 301
++G AEVFDP G A + GGKLY
Sbjct: 193 --EDG-----EAEVFDPEEG--------------RWAPAAARRGAAVARYDAAASGGKLY 231
Query: 302 VPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAGTKLSAVIDGDLYALEPS 361
V + ++WPF G ++D ++SW+EM GM EGW T AV G +Y +
Sbjct: 232 VTEG-WAWPFERAPRGAVYDAASDSWSEMARGMREGW------TGSCAVAGGRMYIV--- 281
Query: 362 TSSDRGKIKIYDPQEDAWKVAIGQVPVGDFAESECPYLLAG 402
++K YD D W++ G G E P++++G
Sbjct: 282 AEYGEWRLKRYDEPRDEWRMVAGS---GVPPEVRRPHVVSG 319
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,889,496
Number of extensions: 799990
Number of successful extensions: 2162
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 2117
Number of HSP's successfully gapped: 17
Length of query: 475
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 370
Effective length of database: 11,553,331
Effective search space: 4274732470
Effective search space used: 4274732470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)