BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0154700 Os10g0154700|AK058898
(181 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0154700 Similar to Cyclophilin Dicyp-2 340 4e-94
Os02g0121300 Cyclophilin 2 195 1e-50
Os09g0571400 Cyclophilin 1 188 2e-48
Os09g0537600 Similar to Cyclophilin-like protein (Single do... 177 5e-45
Os06g0216800 Similar to Cyclophilin-40 (Expressed protein) 172 2e-43
Os02g0761100 Similar to Cyclophilin-40 (Expressed protein) 168 2e-42
Os05g0103200 Peptidyl-prolyl cis-trans isomerase, cyclophil... 163 5e-41
Os06g0708500 Similar to Cyclophilin 163 7e-41
AK062540 161 2e-40
Os03g0811600 Similar to Peptidyl prolyl isomerase H 142 2e-34
Os08g0557500 Similar to Yarrowia lipolytica chromosome C of... 101 3e-22
Os06g0130500 Similar to Cyclophilin-like protein PPIL3b 89 2e-18
Os08g0559400 Similar to Cyclophilin-like protein 82 2e-16
Os06g0670400 70 1e-12
Os06g0670500 Similar to Multidomain cyclophilin type peptid... 66 1e-11
Os02g0111200 64 7e-11
>Os10g0154700 Similar to Cyclophilin Dicyp-2
Length = 181
Score = 340 bits (872), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/181 (93%), Positives = 169/181 (93%)
Query: 1 MAPAASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRL 60
MAPAASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRL
Sbjct: 1 MAPAASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRL 60
Query: 61 HYKGSAFHRVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANA 120
HYKGSAFHRVVPGFMCQ ESALDGAARHFPDEGFAVKHDGPGVVSMANA
Sbjct: 61 HYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANA 120
Query: 121 GPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGV 180
GPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGV
Sbjct: 121 GPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGV 180
Query: 181 L 181
L
Sbjct: 181 L 181
>Os02g0121300 Cyclophilin 2
Length = 172
Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 115/174 (66%), Gaps = 5/174 (2%)
Query: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERA-GRSGKSRLHYKGSAF 67
SN RVF D+ +GG GR+V+EL A VP TAENFR LCTGE+ G+SGK LHYKGS F
Sbjct: 2 SNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKP-LHYKGSTF 60
Query: 68 HRVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGS 127
HRV+P FMCQ ES F DE F KHD PG++SMANAGPNTNGS
Sbjct: 61 HRVIPEFMCQGGDFTRGNGTGGESIY---GEKFADEVFKFKHDSPGILSMANAGPNTNGS 117
Query: 128 QFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGVL 181
QFFI WLDG+HV FGRVV GM V+AI++ G+ G T KPVVI DCG L
Sbjct: 118 QFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQL 171
>Os09g0571400 Cyclophilin 1
Length = 179
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 115/176 (65%), Gaps = 5/176 (2%)
Query: 7 SKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERA-GRSGKSRLHYKGS 65
+ NP+VF DI IG GRVV+EL AD VP TAENFR LCTGE+ G SGK LHYKGS
Sbjct: 2 ASKNPKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKP-LHYKGS 60
Query: 66 AFHRVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTN 125
AFHR++P FMCQ ES F DE F ++H GPGV+SMANAGPNTN
Sbjct: 61 AFHRIIPNFMCQGGDFTRGNGTGGESIY---GDRFADENFKLRHTGPGVLSMANAGPNTN 117
Query: 126 GSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGVL 181
GSQFFI + WLDG+HV FG+VV G V +++ G+ SG T + V+I DCG L
Sbjct: 118 GSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQL 173
>Os09g0537600 Similar to Cyclophilin-like protein (Single domain cyclophilin type
peptidyl- prolyl cis-trans isomerase)
Length = 215
Score = 177 bits (448), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 111/170 (65%), Gaps = 6/170 (3%)
Query: 12 RVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERA-GRSGKSRLHYKGSAFHRV 70
RV+LD+ I G+ +GR+VI L D VP T NFR LCTGE G GKS LHYKGS FHR+
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKS-LHYKGSRFHRI 97
Query: 71 VPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFF 130
+PGFM Q ES G FPDE F VKH PGV++MAN+GP++NGSQF+
Sbjct: 98 IPGFMIQGGDIVRGDGKGSESIYGGT---FPDENFIVKHTHPGVIAMANSGPDSNGSQFY 154
Query: 131 ITVDKAPWLDGRHVAFGRVVAGMGAVRAID-RTGTWSGKTVKPVVITDCG 179
IT K WLDG HV FGRV+ GM V AI+ GT++GK K VVITD G
Sbjct: 155 ITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSG 204
>Os06g0216800 Similar to Cyclophilin-40 (Expressed protein)
Length = 396
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 10 NPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERA-GRSGKSRLHYKGSAFH 68
NPR F+D++IGGE GR+VIEL A VP TAENFR LCTGE+ G LHYKGS FH
Sbjct: 25 NPRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGKHLHYKGSCFH 84
Query: 69 RVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQ 128
RV+ GFM Q ES F DE F +KH+ G++SMAN+GPNTNGSQ
Sbjct: 85 RVIKGFMVQGGDITAGDGTGGESIY---GLKFEDENFVLKHERKGMLSMANSGPNTNGSQ 141
Query: 129 FFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKP---VVITDCGVL 181
FFIT + P LDG+HV FGRV+ GMG VR+++ G+ +P V I DCG L
Sbjct: 142 FFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPV--GEADRPTSDVEIVDCGEL 195
>Os02g0761100 Similar to Cyclophilin-40 (Expressed protein)
Length = 403
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 110/174 (63%), Gaps = 5/174 (2%)
Query: 10 NPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKS-RLHYKGSAFH 68
NPR +LD++IGG+ GR+V+EL A P TAENFR LCTGE+ + LHYKGS H
Sbjct: 32 NPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIH 91
Query: 69 RVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQ 128
R+V GFM Q ES +F DE F +KH+ G++SMANAGP+TNGSQ
Sbjct: 92 RIVKGFMVQGGDITAGDGTGGESIY---GLNFEDENFVLKHERKGMLSMANAGPDTNGSQ 148
Query: 129 FFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGT-WSGKTVKPVVITDCGVL 181
FFIT + P LDG+HV FGRV+ GMG VR+++ S + + +VI DCG L
Sbjct: 149 FFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGEL 202
>Os05g0103200 Peptidyl-prolyl cis-trans isomerase, cyclophilin type domain
containing protein
Length = 250
Score = 163 bits (413), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 109/180 (60%), Gaps = 14/180 (7%)
Query: 6 SSKSNPRVFLDIAIG---GEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHY 62
SK +V+ DI+IG G+ VGRVVI L D VP TAENFR LCTGE+ Y
Sbjct: 78 QSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKG-------FGY 130
Query: 63 KGSAFHRVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGP 122
KGS+FHRV+ FM Q +S R F DE F + H GPGVVSMANAGP
Sbjct: 131 KGSSFHRVIKDFMIQGGDFDKGNGTGGKSIY---GRTFKDENFKLVHTGPGVVSMANAGP 187
Query: 123 NTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSG-KTVKPVVITDCGVL 181
NTNGSQFFI K PWLDGRHV FG+V+ GM V+ I+ T G + K VVI++CG L
Sbjct: 188 NTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISECGEL 247
>Os06g0708500 Similar to Cyclophilin
Length = 249
Score = 163 bits (412), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 12 RVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGER-AGRSGKSRLHYKGSAFHRV 70
+V+ D+ I G+ GRVV+ L VP TAENFR LCTGE+ G+SGK+ LH+KGSAFHR+
Sbjct: 81 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKA-LHFKGSAFHRI 139
Query: 71 VPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFF 130
+P FM Q ES F DE F +KH GPG++SMANAG +TNGSQFF
Sbjct: 140 IPSFMIQGGDFTLGDGRGGESIY---GTKFADENFKIKHTGPGLLSMANAGRDTNGSQFF 196
Query: 131 ITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGVL 181
IT WLDG+HV FG+V++GM V I+ G SG VVI D G L
Sbjct: 197 ITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSPKSKVVIADSGEL 247
>AK062540
Length = 206
Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
K +VF DI IGG+ GRVV+ L VP T ENFR LCTGE+ LHYKGS F
Sbjct: 27 KITNQVFFDITIGGKDAGRVVMGLYGKTVPKTVENFRALCTGEKGMGKKGKPLHYKGSTF 86
Query: 68 HRVVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGS 127
HR++P FM Q ES F DE F +KH G GV+SMANAG NTNGS
Sbjct: 87 HRIIPNFMIQGGDFTDGNGMGGESIY---GEKFEDENFKLKHTGEGVLSMANAGANTNGS 143
Query: 128 QFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGVL 181
QFFI K WLDGRHV FGRV++GM ++A++ G+ G + VV+ D G L
Sbjct: 144 QFFICTVKTSWLDGRHVVFGRVISGMDIIKAVEAVGSGGGTPSEQVVVKDSGEL 197
>Os03g0811600 Similar to Peptidyl prolyl isomerase H
Length = 204
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 100/174 (57%), Gaps = 7/174 (4%)
Query: 10 NPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHR 69
NP VF D+ IG GR+ +EL AD VP TAENFR+ CTGE +SG + YKG FHR
Sbjct: 36 NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHR-KSGLPQ-GYKGCQFHR 93
Query: 70 VVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQF 129
V+ FM Q S F DE F KH GPG++SMAN+G N+NGSQF
Sbjct: 94 VIKDFMIQGGDYMKGDGTGCTSIY---GTKFDDENFIAKHTGPGLLSMANSGVNSNGSQF 150
Query: 130 FITVDKAPWLDGRHVAFGRVVA-GMGAVRAIDRTGTWSGKTVK-PVVITDCGVL 181
FIT K WLD +HV FGRV+ GM AVR I+ T K VI++CG +
Sbjct: 151 FITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGEM 204
>Os08g0557500 Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of
Yarrowia lipolytica
Length = 154
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 27/148 (18%)
Query: 24 VGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQXXXXXX 83
+G + + L ++ P T ENF C R+G +Y FHRV+ GFM Q
Sbjct: 7 MGDIHLRLYPEECPKTVENFTTHC------RNG----YYDNLIFHRVIKGFMIQTG---- 52
Query: 84 XXXXXXESALDGAA------RHFPDEGF-AVKHDGPGVVSMANAGPNTNGSQFFITVDKA 136
+ DG R F DE +++HD P +SMANAGPNTNGSQFFIT
Sbjct: 53 ------DPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVAT 106
Query: 137 PWLDGRHVAFGRVVAGMGAVRAIDRTGT 164
PWLD +H FGRVV GM V+ I++ T
Sbjct: 107 PWLDNKHTVFGRVVKGMDVVQQIEKVKT 134
>Os06g0130500 Similar to Cyclophilin-like protein PPIL3b
Length = 160
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 24 VGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQXXXXXX 83
+G + E+ D+ P TAENF LC SG +Y G+ FHR + GFM Q
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCA------SG----YYDGTIFHRNIKGFMIQGGDPTG 58
Query: 84 XXXXXXESALDGAARHFPDE-GFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGR 142
+ + F DE ++KH+ GV+SMAN+GPNTNGSQFFIT K P L+G
Sbjct: 59 TG----KGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGH 114
Query: 143 HVAFGRVVAGMGAVRAIDRTGTWSG 167
+ F +V+ G + +++ T G
Sbjct: 115 YTVFAKVIHGFEVLDLMEKAQTGPG 139
>Os08g0559400 Similar to Cyclophilin-like protein
Length = 164
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 20/151 (13%)
Query: 10 NPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHR 69
P V L+ ++G IE+ P T NF L R +Y FHR
Sbjct: 9 TPEVTLETSMGA-----FTIEMYYKHAPKTCRNFLELS----------RRGYYDNVIFHR 53
Query: 70 VVPGFMCQXXXXXXXXXXXXESALDGAARHFPDEGF-AVKHDGPGVVSMANAGPNTNGSQ 128
++ F+ Q ++ GA F DE +KH G G++SMANAGPNTNGSQ
Sbjct: 54 IIKDFIVQGGDPTGTGRGG--ESIYGAK--FEDEIRPELKHTGAGILSMANAGPNTNGSQ 109
Query: 129 FFITVDKAPWLDGRHVAFGRVVAGMGAVRAI 159
FFIT+ LDG+H FGRV GM V+ +
Sbjct: 110 FFITLAPCQSLDGKHTIFGRVSKGMEIVKRL 140
>Os06g0670400
Length = 521
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 24 VGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQXXXXXX 83
VG + ++L D P T +NF +LC + +Y G FH++ F+ Q
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKMK----------YYNGCLFHKIEKDFLAQTGDSTG 58
Query: 84 XX---XXXXESALDGAARHFPDEGF-AVKHDGPGVVSMANAGPNTNGSQFFITV-DKAPW 138
+ AR F DE ++H G ++MA+AG N N SQF+IT+ D +
Sbjct: 59 TGAGGDSVYKFLYGDQARFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDY 118
Query: 139 LDGRHVAFGRVVAGMGAVRAIDRTGTWS-GKTVKPVVITDCGVL 181
LD +H FG V G + I+ T G+ K + I VL
Sbjct: 119 LDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRIRHTYVL 162
>Os06g0670500 Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase
Length = 564
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 24 VGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQX---XX 80
VG + ++L D P T +NF +LC + +Y G FH+V F+ Q
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKMK----------YYNGCLFHKVEKDFLAQTGDPTG 58
Query: 81 XXXXXXXXXESALDGAARHFPDEGFA-VKHDGPGVVSMANAGPNTNGSQFFITV-DKAPW 138
+ AR F DE ++H G ++MA+AG N N SQF+IT+ D +
Sbjct: 59 TGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDY 118
Query: 139 LDGRHVAFGRVVAGMGAVRAIDRT 162
LD +H FG V G + I T
Sbjct: 119 LDDKHTVFGMVAEGFDTLTKISET 142
>Os02g0111200
Length = 139
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 29 IELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQXXXXXXXXXXX 88
+EL AD VP TAENFR L T K LHYKG + P +
Sbjct: 1 MELYADLVPLTAENFRALYT--------KKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHR 52
Query: 89 XESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGR 148
L P+E F + HD P + N N SQFF V PW DG +V FG
Sbjct: 53 RRVHLRRHL---PNENFLLPHDRPW---LPNGSAENNISQFFTRV---PWFDGNYVVFGC 103
Query: 149 VVAGMGAVRAID 160
+++G ++AI+
Sbjct: 104 IISGFHNLKAIE 115
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,402,657
Number of extensions: 253850
Number of successful extensions: 489
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 468
Number of HSP's successfully gapped: 16
Length of query: 181
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 86
Effective length of database: 12,075,471
Effective search space: 1038490506
Effective search space used: 1038490506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)