BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0138300 Os10g0138300|J075095H05
(476 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0138300 Conserved hypothetical protein 821 0.0
Os10g0139000 245 4e-65
Os10g0138600 Cyclin-like F-box domain containing protein 174 9e-44
Os10g0138900 139 6e-33
Os10g0138700 138 8e-33
Os10g0145200 Cyclin-like F-box domain containing protein 113 3e-25
Os10g0145100 Cyclin-like F-box domain containing protein 107 2e-23
Os10g0145000 Cyclin-like F-box domain containing protein 106 4e-23
Os02g0249700 Cyclin-like F-box domain containing protein 95 1e-19
Os07g0421000 Cyclin-like F-box domain containing protein 87 2e-17
Os08g0299900 Cyclin-like F-box domain containing protein 84 2e-16
Os10g0142500 Cyclin-like F-box domain containing protein 84 3e-16
Os07g0120500 Protein of unknown function DUF538 family protein 81 2e-15
Os10g0139300 Cyclin-like F-box domain containing protein 80 3e-15
Os07g0120400 Cyclin-like F-box domain containing protein 77 2e-14
Os07g0123000 Cyclin-like F-box domain containing protein 75 1e-13
Os08g0299700 71 2e-12
Os10g0136200 Cyclin-like F-box domain containing protein 70 3e-12
Os10g0137000 Cyclin-like F-box domain containing protein 66 6e-11
>Os10g0138300 Conserved hypothetical protein
Length = 476
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/462 (88%), Positives = 407/462 (88%)
Query: 1 MAELPPVQIVAAKDDVPPPYLTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACF 60
MAELPPVQIVAAKDDVPPPYLTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACF
Sbjct: 1 MAELPPVQIVAAKDDVPPPYLTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACF 60
Query: 61 GRRFRLDYDGPTPLLGFFSNNXXXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHG 120
GRRFRLDYDGPTPLLGFFSNN VVGLAPPEEAVSAGDGSVQHIYDARHG
Sbjct: 61 GRRFRLDYDGPTPLLGFFSNNAAGPFFTATGAGVVGLAPPEEAVSAGDGSVQHIYDARHG 120
Query: 121 RVLMDGREDKELLVWDPLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYR 180
RVLMDGREDKELLVWDPLSRRKDFIPMPP ALICE PYR
Sbjct: 121 RVLMDGREDKELLVWDPLSRRKDFIPMPPGYFVGEGYGGGALICEADHGAGDDCHAAPYR 180
Query: 181 VVFVYCGSDRPPTTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQI 240
VVFVYCGSDRPPTTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQI
Sbjct: 181 VVFVYCGSDRPPTTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQI 240
Query: 241 IEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTK 300
IEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTK
Sbjct: 241 IEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTK 300
Query: 301 VTTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDSKIIPSHPPTIK 360
VTTLHLDAMRPSQSYQQ AHQFGPKAKKDSKIIPSHPPTIK
Sbjct: 301 VTTLHLDAMRPSQSYQQVLDSDTDSDSDDEEEVVLLLAHQFGPKAKKDSKIIPSHPPTIK 360
Query: 361 SDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYES 420
SDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYES
Sbjct: 361 SDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYES 420
Query: 421 FYTTVGKANFNDPVLIDHENNDEQGLQQLEPLNDTILPDQEN 462
FYTTVGKANFNDPVLIDHENNDEQGLQQLEPLNDTILPDQEN
Sbjct: 421 FYTTVGKANFNDPVLIDHENNDEQGLQQLEPLNDTILPDQEN 462
>Os10g0139000
Length = 200
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 141/198 (71%), Gaps = 32/198 (16%)
Query: 219 ELKQPAVLDYTVYWLVNGRTQIIEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTGMM 278
+LKQP VLDY +YWLV GRTQIIEFE DTN+LAL RTPVDLPD +VFPMEDG LGY GMM
Sbjct: 10 DLKQPTVLDYAIYWLVEGRTQIIEFESDTNTLALLRTPVDLPDFLVFPMEDGWLGYAGMM 69
Query: 279 GPIVRVFAIEDIYEDG-DATWTKVTTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXX 337
GPI+RVFAI+DIYED D+ L L
Sbjct: 70 GPIIRVFAIKDIYEDDFDSDDEMEVVLML------------------------------- 98
Query: 338 AHQFGPKAKKDSKIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVD 397
A +FGPK KKDS IIPSHP IKSDNDEYNH+VIRPRVIGFI+DPNSILVR ELGVFMVD
Sbjct: 99 AQKFGPKEKKDSNIIPSHPAVIKSDNDEYNHIVIRPRVIGFIDDPNSILVRTELGVFMVD 158
Query: 398 IESNEYEQLSQRIYFTTV 415
IESNEY+QL+QRI F T+
Sbjct: 159 IESNEYKQLNQRINFATM 176
>Os10g0138600 Cyclin-like F-box domain containing protein
Length = 478
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 200/454 (44%), Gaps = 61/454 (13%)
Query: 21 LTDNVVHNLLLCLAPEPAYLAVATAVSTKWR-SVVHSEACFGRRFRLDYDGPTPLLGFFS 79
L ++ + ++LL L EP YLAVA AV+ WR V+ S F R FR + G PLLGFF
Sbjct: 31 LPNDALRSILLRLPSEPGYLAVAAAVTKNWRRQVLGSNGSFLRAFRAAHGGVPPLLGFFC 90
Query: 80 NNXXX---XXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGREDKELLVWD 136
N VV L+PP AG I+D RHGRVL+D ED +LLVWD
Sbjct: 91 NRRNLPCPFFTSTVDAGVVDLSPP-----AGK-QRPFIHDVRHGRVLLDDGEDGQLLVWD 144
Query: 137 PLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXX--------XPYRVVFVYCGS 188
PL+RR+D IP P A+IC PYRV+ + +
Sbjct: 145 PLARRRDIIPTPRCYFTNDDSCGAAIICGCDGLEHVVGASVGGGDCHLAPYRVIVAF--N 202
Query: 189 DRP---------PTTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQ 239
DRP V+ S T W V +M F+ A++ ++WLV
Sbjct: 203 DRPNYRSDEWNHECICTRVWISETKEWSEVYSMRGSCDFDFMPSALVAGAIHWLVGDTNS 262
Query: 240 IIEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDA--- 296
+++F T LAL +TP+D+ + ++FP +DG+LG+TG++G + F + DI GDA
Sbjct: 263 VLQFNLITKKLALIQTPLDISEFMLFPTKDGKLGFTGVLGSHIIFFHM-DIA--GDALTT 319
Query: 297 --TWTKVTTLHLDAMRP-------------SQSYQQXXXXXXXXXXXXXXXXXXXXAHQF 341
TW+ + +D P S +
Sbjct: 320 MRTWSIQNVIQVDHFLPPYINILRTRRSLASPWVVDYYVSDSDEGEEEHGVDDDDEPREI 379
Query: 342 GPKAKKDSKIIPSHPPTIK-----SDNDEYNHVVI-----RPRVIGFIEDPNSILVRNE- 390
P + D++ SH P D D+ +I VIGF+ + N++L+
Sbjct: 380 LPTMQHDNEASGSHSPQWSESWYDEDFDQEKDALIPTVSENVNVIGFVTEANAVLLYAAG 439
Query: 391 LGVFMVDIESNEYEQLSQRIYFTTVYPYESFYTT 424
GV+ +D+E+ ++++ ++ V+PY SFYT
Sbjct: 440 RGVYTIDVETKHTQRVAACANYSHVFPYTSFYTA 473
>Os10g0138900
Length = 132
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 71/83 (85%)
Query: 338 AHQFGPKAKKDSKIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVD 397
A +FGPK KKDS IIPS PPTIKSDNDEYN+V+IR RVIGFI+DPNSILVR ELGVFM D
Sbjct: 34 ARKFGPKEKKDSNIIPSLPPTIKSDNDEYNYVMIRLRVIGFIDDPNSILVRTELGVFMFD 93
Query: 398 IESNEYEQLSQRIYFTTVYPYES 420
IE NEYEQLSQRI F VYPY S
Sbjct: 94 IELNEYEQLSQRINFAAVYPYAS 116
>Os10g0138700
Length = 263
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 71/89 (79%)
Query: 338 AHQFGPKAKKDSKIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVD 397
A GPK KKDS IIPSHP IKSDN EYNHVVIR RVIGFI+DPNSILVR EL VFMVD
Sbjct: 26 ARMIGPKEKKDSNIIPSHPRAIKSDNGEYNHVVIRLRVIGFIDDPNSILVRTELSVFMVD 85
Query: 398 IESNEYEQLSQRIYFTTVYPYESFYTTVG 426
IESN Y+QLS RI F TVYPY SFY+T
Sbjct: 86 IESNGYQQLSWRINFATVYPYVSFYSTAS 114
>Os10g0145200 Cyclin-like F-box domain containing protein
Length = 378
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 170/415 (40%), Gaps = 66/415 (15%)
Query: 23 DNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSNNX 82
D+V+ +LL L P P++L+ A+ V +WR + F RR R + P P+LGFF +N
Sbjct: 19 DDVIAEILLRLPPHPSFLSRASLVCNRWRRLARDPG-FLRRLRAFHRTP-PVLGFF-HNS 75
Query: 83 XXXXXXXXXXXVVGLAPPEEAV--SAGDGSVQHIYDARHGRVLMDGREDKELLVWDPLSR 140
V G E A GD + D RHGR L+ R+ ELLVWDP++
Sbjct: 76 PDLPRFVPAEGVPGRVAAEAASLRRDGDDGMWWCVDCRHGRALLRSRDWAELLVWDPMTG 135
Query: 141 RKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPPTTMASVYS 200
+ I + A+ C P+ VV V+ A VYS
Sbjct: 136 ERRCITVSSQIQEGALDLNAAVFCAASGGGDQDCHSSPFHVVVVFTTGQCHGRVFACVYS 195
Query: 201 SRTNTWG-PVAT-MDARVTFELKQPAVLDYTVYWLVNGRTQIIEFEFDTN--SLALFRTP 256
S + WG P++T + + + P ++ +YWL++G ++I+EFEF LAL P
Sbjct: 196 SGIDAWGDPISTPVTSPCELYEEPPVLVGEALYWLLDG-SRILEFEFGNQCLCLALIDHP 254
Query: 257 VDLPDIVVFPMEDGRLGYTGMMG-PIVRVFAI----EDIYEDGDATWTKVTTLHLDAMRP 311
V+ I+ + R+ ++G V+ F++ ++ +DG + W + LD + P
Sbjct: 255 VENHAILKRNIRLVRMEDDDVLGLAFVKDFSLHLWAREVADDGASQWIPRRAIELDMILP 314
Query: 312 SQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDSKIIPSHPPTIKSDNDEYNHVVI 371
+ Y+ + +P D D
Sbjct: 315 LEGYR--------------------------------CRAMPIWICGFAEDGD------- 335
Query: 372 RPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYESFYTTVG 426
+ +R GVF+V +++ +++++S + TVY Y SFY G
Sbjct: 336 ------------VVFIRTVAGVFLVWLDTLKFKKVSGSLLMKTVYSYASFYVPNG 378
>Os10g0145100 Cyclin-like F-box domain containing protein
Length = 379
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 173/415 (41%), Gaps = 69/415 (16%)
Query: 21 LTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSN 80
L D+VV +LLCL P P++++ A+ V +W ++ S + F RR + P P+LGFF +
Sbjct: 15 LPDDVVAEILLCLPPHPSFVSGASLVCKRWLHLIRSPS-FLRRVCAFHRTP-PVLGFF-H 71
Query: 81 NXXXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGREDKELLVWDPLSR 140
N V G + GD + D RHGR L+ + +L+VWDP++
Sbjct: 72 NYRDLPSFVPAEGVPGRNRMDGVDDGGD--ARMFIDCRHGRALLRRYDWADLVVWDPMTG 129
Query: 141 RKDFIPMPPXXX----XXXXXXXXALICEXXXXXXXX---XXXXPYRVVFVYCGSDRPPT 193
+ I P AL C P+ VV V+ G R
Sbjct: 130 ERRRIAGPNQKMQGGGAGTSRRSAALFCSCDVSGGGGDQDCHSSPFHVVVVFTGGCR--- 186
Query: 194 TMASVYSSRTNTWGPVATMDARVTFELKQ--PAVLDYTVYWLVNGRTQIIEFEFDTNSLA 251
A VYSS T+ WG + + A + EL PA++ YWL G I+EF+F + SL
Sbjct: 187 AFACVYSSLTDAWGDLISTPAPLPCELCDTPPALVGEASYWLSYG-GLILEFQFGSQSLT 245
Query: 252 LFRTPVD-LPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTKV--TTLHLDA 308
L + P++ L D+ + +E+ LG + + ++A E + +DG W + + LD
Sbjct: 246 LMKRPLEMLADVRLVRLEEDGLGLAFIKDSTLHLWARE-VADDGAPKWKWIPRRAIELDK 304
Query: 309 MRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDSKIIPSHPPTIKSDNDEYNH 368
P P+ K +I +++ N
Sbjct: 305 FLPM------------------------------PRVLT-GKWCGEMFVSISGFSEDGNV 333
Query: 369 VVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYESFYT 423
V I R GVF+V +E+ +++++S +Y TV+PY SFY
Sbjct: 334 VFI----------------RTLAGVFLVWLEALKFKKMSDPLYMMTVHPYSSFYV 372
>Os10g0145000 Cyclin-like F-box domain containing protein
Length = 400
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 174/415 (41%), Gaps = 71/415 (17%)
Query: 21 LTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSN 80
L D+V+ +LL L P P++L+ A+ VS +W + + F RRFR ++ P+LGFF N
Sbjct: 19 LPDDVLAEILLRLPPHPSFLSSASLVSKRWLRHTRNPS-FLRRFR-EFHRTAPVLGFFLN 76
Query: 81 NXXXXXXXXXXXXVVGLAPPEEAV--SAGDGSVQHIYDARHGRVLMDGREDKELLVWDPL 138
+ + +A ++ + GDG + + RHGRVL+ + LLVWDP+
Sbjct: 77 SSHGALFFPTDAPLCRIADQVASLRRNTGDG-LWWLVGCRHGRVLLRSCDWANLLVWDPM 135
Query: 139 SRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPPTTMASV 198
+ P P A+ C + V V+ D +
Sbjct: 136 TEGFVCFPAPIQMVQADADRDAAVFCAASAGDEDRRSGA-FNVAVVFVSGDH---VFGCM 191
Query: 199 YSSRTNTWGPVATMDARVTFEL--KQPAVL-DYTVYWLVNGRTQIIEFEFDTNSLALFRT 255
+SS WG V + + + +PA L +YW+VNG + ++EF + SLAL
Sbjct: 192 FSSAIGAWGDVISTPVTLPLLMIYDEPAALAGEALYWIVNG-SSLLEFNCGSQSLALISR 250
Query: 256 PVDLP-----DIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTKVTTLHLDAMR 310
P D+P +I +ED LG + ++ + ++ +DG W ++ +D +
Sbjct: 251 PSDMPATHRWNIRPVSLEDDLLGLAFFNDFCLHLW-VREVADDGATNWVPRKSVEMDKLL 309
Query: 311 PSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDS--KIIPSHPPTIKSDNDEYNH 368
P A +DS +I+P+
Sbjct: 310 SL------------------------------PVATEDSRRRIVPAW------------- 326
Query: 369 VVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQ-RIYFTTVYPYESFY 422
+ GF D N + + G+F+V++++ ++++++ + TV+PYESFY
Sbjct: 327 ------ICGFSGDGNVVFIGTPAGIFLVELDTLKFKKVTDGSLLIKTVHPYESFY 375
>Os02g0249700 Cyclin-like F-box domain containing protein
Length = 439
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 166/435 (38%), Gaps = 92/435 (21%)
Query: 17 PPPYLTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLG 76
P P D+++ +LL L P P+ L A AV +WR +V ++ F RRFR + PLLG
Sbjct: 6 PRPLEDDDLLAEILLRLPPRPSSLPRAAAVCARWRRLVTADPAFLRRFRAHHRRGAPLLG 65
Query: 77 FFSNNXXXXXXXXXXXXVVGLAPPEE---AVSAG-------DGSVQHIYDARHGRVLMDG 126
FF ++ V + PP+ AV AG D I R G VL
Sbjct: 66 FFHSH------RVSPSFVSTMDPPDRVPAAVGAGGRFSLRFDDFRCRILGCRDGLVLAVN 119
Query: 127 ----REDKELLVWDPLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVV 182
R LVWDP+S + + PP + +R
Sbjct: 120 PVMPRLRGCFLVWDPVSGDQRRVAFPPECDQGQTEVRNGAVFRLPGGGGG------FRFQ 173
Query: 183 FVYCGSDRPPTTMASVYSSRTNTWG-----PVATMDARVTFELKQPAVLDYTVYWLVNGR 237
V G+ + +YSS T WG P+ R++ + + D ++YWL++G
Sbjct: 174 IVLVGTRHQYEAIGCIYSSETGKWGDLIATPLPHNLTRISLAVPGVRIGD-SLYWLISGI 232
Query: 238 -TQIIEFEFDTNSLALF-RTPVDLPD----IVVFPMEDGRLGYTGMMGPIVRVFAIEDIY 291
I+EF+ + LA+ P+ + D V P DG LG+ M + + ++ +
Sbjct: 233 PGGILEFDLNEQRLAVIDDVPMAVSDGYRRFCVVPAADGGLGFVFMSDLGSQFWRRKNDW 292
Query: 292 ED--GDATWTKVTTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDS 349
+D ++ W T+ L + P +K S
Sbjct: 293 DDDVSESGWVLEKTVQLGELL-----------------------------SLSPTERKGS 323
Query: 350 KIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQR 409
P V+GF ED N I ++ G+FMV +ES E++++ +
Sbjct: 324 -----------------------PIVMGFSEDYNVIFLKTINGLFMVHLESMEFKRILKD 360
Query: 410 IYFTTVYPYESFYTT 424
+YP+ S YT
Sbjct: 361 CAALFIYPFASVYTA 375
>Os07g0421000 Cyclin-like F-box domain containing protein
Length = 378
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 160/422 (37%), Gaps = 89/422 (21%)
Query: 24 NVVHNLLLCLAP-EPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSNNX 82
+V +LL L P EP +L A+ V W + + F RR+R + G PLLG
Sbjct: 11 ELVSEILLRLRPDEPEHLFRASLVCKAWLRAI-CDPVFLRRYR-AFHGSPPLLGLLHRLR 68
Query: 83 XXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGREDKELLVWDPLSRRK 142
LA A + D + D RHGRVL+ + L+VWDP++ +
Sbjct: 69 VIDGDPAPR-----LARTTAAPLSPDPAFLRALDCRHGRVLLHA-SNLGLIVWDPVTGEQ 122
Query: 143 DFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPPTTMASVYSSR 202
+P A+ C P+RVVFV D SVYSS
Sbjct: 123 HRLP---ESGIPWLIYTAAVFCAVGGCDHLDCHGGPFRVVFV-ATDDDDELVKGSVYSSE 178
Query: 203 TNTWGPVATMD------------ARVTFEL--------KQPAVLDYTVYWLVNGRTQIIE 242
T W AT+D AR E K+ A++ +Y+ + IIE
Sbjct: 179 TGVWSTPATLDDGYQSWEERWQAARSRGEYYRTPYVHPKRCALVGDEIYFTLRNGNTIIE 238
Query: 243 FEFDTNSLALFRTPV-DLPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTKV 301
+ + N L++F P DL I + ME+G LG+ G+ G + V++ + G A W
Sbjct: 239 YNWGKNRLSMFDPPTSDLYYIALTVMENGSLGFAGIEGSSLNVWS-RKVNPQGAAEWVLC 297
Query: 302 TTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDSKIIPSHPPTIKS 361
+ L+ KIIP +
Sbjct: 298 RIIELE------------------------------------------KIIP-----VVD 310
Query: 362 DNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYESF 421
+DE V+G E I V +G+F ++++S ++L + + +V PY SF
Sbjct: 311 LSDEAC-------VVGSAEGLGVIFVSTGVGLFTIELKSRRVKKLEEPGVYFSVLPYMSF 363
Query: 422 YT 423
YT
Sbjct: 364 YT 365
>Os08g0299900 Cyclin-like F-box domain containing protein
Length = 374
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 164/439 (37%), Gaps = 112/439 (25%)
Query: 17 PPPYLTDNVVHNL--------LLCLAP-EPAYLAVATAVSTKWRSVVHSEACFGRRFRLD 67
PPP L DNV +L LL L P EP +L A V W + E F RR ++
Sbjct: 3 PPPELIDNVTASLPPDLISEILLRLPPDEPEHLFRAALVCKSWLRAI-CEHGFLRRLKVM 61
Query: 68 YDGPTPLLGFFSNNXXXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGR 127
P L V L+P D + + D RHGR L+
Sbjct: 62 QGDPAARLA--------------RTTAVPLSP--------DPTFRRALDCRHGRALLHAS 99
Query: 128 EDKE-LLVWDPLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYC 186
+D L+VWDP++ + +P P A+ C P+RVVF+
Sbjct: 100 DDDWYLIVWDPVTGERHRVPEP---GIPWLIYSAAVFCAASGCDHLDCHGGPFRVVFI-A 155
Query: 187 GSDRPPTTMASVYSSRTNTWGPVATM-DARVTFELK---------------QP---AVLD 227
D ASVYSS T W + D T++ + QP A++
Sbjct: 156 TDDDDELVKASVYSSETCAWNKTVILADGYQTWQERLQAITRGESYRTPYVQPRRGALVG 215
Query: 228 YTVYWLVNGRTQIIEFEFDTNSLALFRTPV-DLPDIVVFPMEDGRLGYTGMMGPIVRVFA 286
+Y+ + II++ + N L+ P+ D+ DI + ME+G LGY + G + V++
Sbjct: 216 DEIYFTLRNENAIIKYNWAANCLSKIDPPIRDVYDISLMEMENGSLGYACIQGSSLYVWS 275
Query: 287 IEDIYEDGDATWTKVTTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAK 346
+ +G A W + + L+ M P
Sbjct: 276 -RNASSEGAAEWVQCWVIELEQMVP----------------------------------- 299
Query: 347 KDSKIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQL 406
+ + DE VV +G I + +G+F ++++S +++
Sbjct: 300 ------------VANRGDE-AFVVGSAEGVGVI------FMSTGVGLFTIELKSRRVKKV 340
Query: 407 SQRIYFTTVYPYESFYTTV 425
+ +++V PY SFYT V
Sbjct: 341 EEPGVYSSVLPYMSFYTPV 359
>Os10g0142500 Cyclin-like F-box domain containing protein
Length = 394
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 175/442 (39%), Gaps = 95/442 (21%)
Query: 14 DDVPPPYLTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTP 73
D++P L+D+V+ +LL + P P L A AV +WR + +E F RR+R + P P
Sbjct: 6 DEMP---LSDDVLREILLRVPPLPTQLIRAGAVCRRWRRIA-AEPGFLRRYRAHHGEP-P 60
Query: 74 LLGFFSNNXXXXXXXXXXXXVVGLAPPEE-AVSAGD----GSVQHIYDARHGRVLM---- 124
LLGFF N PPE ++ D G + + RHGR+L+
Sbjct: 61 LLGFFVNPRGREPLFRATLDAPDRVPPERFSIRLHDDTELGGNWYYHGCRHGRLLLLNWK 120
Query: 125 DGREDKELLVWDPLSRRKDFIPMPPXXXXXXXXXXXA-LICEXXXXXXXX-----XXXXP 178
G +++L+WDP+S + PP A +IC P
Sbjct: 121 SGLGCRQILIWDPVSGDLIHLSPPPQLDALKGVFFQATVICAATTAAGDHVHGDNCKSNP 180
Query: 179 YRVVFVYCGSDRPPTTMASVYSSRTNTWGPVAT---MDARVTFELKQPAVLDYTVYWLVN 235
++VV V G+DR T A VYSS T WG A + ++ + + D+ +YW++
Sbjct: 181 FKVVLV--GTDR-STAFAFVYSSETGDWGDHAAETPVGNCISLGCRCIQIGDF-LYWMLF 236
Query: 236 GR-TQIIEFEFDTNSLALFRTPVDLPD--IVVFPM---EDGRLGYTGMMGPIVRVFAIED 289
G I+EF +SL++ P + + ++P+ E LG M ++++
Sbjct: 237 GYDNNILEFNLVNHSLSVVYVPTHIHEDHDGLYPITLQEGTELGLIVMSRSCMQIWQWM- 295
Query: 290 IYEDGDATWTKVTTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDS 349
I DG W + ++LD + H + +
Sbjct: 296 IDFDGLPGWLPLEPIYLDNL----------------------------LHLSAGECVNPT 327
Query: 350 KIIPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQR 409
K++ GF +D N + V + +FMV++ES +++L +
Sbjct: 328 KVL------------------------GFSQDYNELFVASSTRIFMVNLESLRFKELCKM 363
Query: 410 IYFT---------TVYPYESFY 422
F VYP SFY
Sbjct: 364 DEFLDSPDSRPIYAVYPIASFY 385
>Os07g0120500 Protein of unknown function DUF538 family protein
Length = 516
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Query: 19 PYLTDNVVHNLLLCLAP-EPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGF 77
P L D++ +LL + P EPA+L A+ V WR ++ ++ F RR+R + P P+LGF
Sbjct: 5 PELIDDIAAEILLRIPPDEPAHLVHASLVCKPWRRIL-TDPAFLRRYRAFHRTP-PVLGF 62
Query: 78 FSNNXXXXXXXXXXXXV-VGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGREDKELLVWD 136
N V A P + + D RHGRVL EL+VWD
Sbjct: 63 LHNVDGNKAISSVPRFVPTTAASPFSPPAIDPPNWWWALDCRHGRVLSHLFNPMELMVWD 122
Query: 137 PLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPPTTMA 196
P++ + P+PP A++C P+ VVFV G+ R + A
Sbjct: 123 PITGDQHRFPLPP---HPHAYCTGAVLCAASDCHHLDCHQGPFLVVFV--GTGRHDHSWA 177
Query: 197 SVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQIIEFEFDTNSLALFRTP 256
VYSS+T W A++ E+ + + T+Y+ T+I+ ++ + L+ P
Sbjct: 178 CVYSSKTGEWSSQASIVLDSYVEMLPSVLAENTLYFYCEYGTKILGYDIGKHELSEIDPP 237
Query: 257 V 257
+
Sbjct: 238 L 238
>Os10g0139300 Cyclin-like F-box domain containing protein
Length = 425
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 169/439 (38%), Gaps = 75/439 (17%)
Query: 21 LTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGP--TPLLGFF 78
LTD+++ + L L P PA L + VS ++R VV S F RRF + G PL+GFF
Sbjct: 26 LTDDILAEIFLRLPPHPACLRRVSLVSRRFRRVVTSRR-FLRRFSDLHGGAPGAPLVGFF 84
Query: 79 SNNXXXXXXXXXXXXV------------------VGLAPPEEAVSAGDGSVQHIYDARHG 120
SN+ V P ++ GD + H+ R G
Sbjct: 85 SNHNHGPWADTRFIPVGVDGTGDSRRSRCRSRRATAARNPGGVLALGDDAEWHVIGCRGG 144
Query: 121 RVLMDGREDKELLVWDPLSRRKDFIPMPPX-XXXXXXXXXXALICEXXXXXXXXXXXXPY 179
RVL+ LLV +P+ R+ +IP PP A++ +
Sbjct: 145 RVLLLSPTRLRLLVLEPMLGRRQYIPAPPAPEYRPAYFSNAAVVSAAGGHDELRLRPHLF 204
Query: 180 RVVFVYCGSDRPPTTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQ 239
RVVFV + +T A VY+S T W A + + + ++ T+YW +
Sbjct: 205 RVVFVSSNAATKRST-AFVYNSATFRWTKAAATEMSSVIDGRPSVLIGQTLYWHLISH-G 262
Query: 240 IIEFEFDTNSLALFRTPVDLPD--------IVVFPMEDGRLGYTGMMGPIVRVFAIEDIY 291
++ F +T+ L P D D IVV G +G + G I++++ + D Y
Sbjct: 263 LVAFNLETHELHEILVPADAFDDVHDANLSIVVPRSGGGGVGLAAVSGYILQLWTLRD-Y 321
Query: 292 EDGDATWTKVTTLHLDAMRPSQSYQQXXXXXXXXXXXXXXXXXXXXAHQFGPKAKKDSKI 351
G +TW + LDA+ P +++++
Sbjct: 322 THGASTWDLRNIVVLDALLP----------------------------------LRNARL 347
Query: 352 IPSHPPTIKSDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIY 411
P PP + + V + + ED N V GVF V +++ Y ++ +
Sbjct: 348 PP--PPQLPASAKPMPLVWL----MALDEDENVGYVWTAAGVFAVQLDTMNYHKVLGPVC 401
Query: 412 --FTTVYPYESFYTTVGKA 428
V+PY+SF+ G +
Sbjct: 402 RGMQFVFPYKSFFLPQGGS 420
>Os07g0120400 Cyclin-like F-box domain containing protein
Length = 368
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 17/301 (5%)
Query: 19 PYLTDNVVHNLLLCLAPE-PAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGF 77
P L D++ + +LL + P+ PA L A+ V +WR ++ ++ F RR+R + P P+LGF
Sbjct: 6 PELVDDMTYEILLHIPPDDPASLVRASLVCKRWRQLL-TDPAFLRRYRAFHRTP-PMLGF 63
Query: 78 FSNNXXXXXXXXXXXXVVGLAPPEEAVSAGDGSVQH-----IYDARHGRVLMDGREDKEL 132
N V +P S++ D RHGR+L+ +L
Sbjct: 64 IHNVDHSSNSSYIPRFVATTSPSPFYPDFPPPSIEFPTYWWALDCRHGRLLLQLFNPIDL 123
Query: 133 LVWDPLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPP 192
+VWDP + P PP A++C PY VVFV G D
Sbjct: 124 MVWDPTTGDHRIFPQPP---YLDFYCTGAVLCATRGCRHVDCHGGPYLVVFVGTGEDD-- 178
Query: 193 TTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQIIEFEFDTNSLAL 252
+ A VYSS T W A++ E+ ++ T+Y+ +I+ ++ + L+
Sbjct: 179 HSWACVYSSETGEWSSQASIAFDSYVEMLPGLLVQDTLYFRCERGKRILGYDIGRHELSE 238
Query: 253 FRTPVDLPDIVVFPMEDGR--LGYTGMMGPIVRVFAIEDIYEDGDATWTKVTTLHLDAMR 310
P L V ME G LG+ + + +++ + +DG W K + LD +
Sbjct: 239 IDPP-PLGHEVGILMESGYGGLGFATVEDCSILLWS-RYVGDDGIEEWKKSWVIGLDFLN 296
Query: 311 P 311
P
Sbjct: 297 P 297
>Os07g0123000 Cyclin-like F-box domain containing protein
Length = 414
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 134/306 (43%), Gaps = 26/306 (8%)
Query: 21 LTDNVVHNLLLCLAP-EPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFS 79
LTD+++ +LL L P EPA L A+AV WR ++ +A F RR+R D+ G PLLGF
Sbjct: 16 LTDDLIAEILLRLRPSEPACLVRASAVCKPWRRLLTDQA-FLRRYR-DFHGAPPLLGFLH 73
Query: 80 NNXXXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGRE-DKELLVWDPL 138
N ++PP+ A D RHGR L+D + VW P+
Sbjct: 74 NVAGGGEDRYVPFTASPVSPPDIACPC-----WVALDCRHGRALLDEFPFSADFTVWHPM 128
Query: 139 SRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXX-XXXXXPYRVVFVYCGSDRPPTT--- 194
+ R+ +P A++C P+ VV V G D P
Sbjct: 129 AGRRRRLPR--PDLPYFMSYAAAVLCSAVGCNHLDCRGGGPFLVVVV--GIDEPEQQNSR 184
Query: 195 -MASVYSSRTNTWGPVA------TMDARVTFELKQPAVLDYTVYWLVNGRTQIIEFEFDT 247
A+VYSS +++W P T+ + K A++ +++ + + II++
Sbjct: 185 PWATVYSSDSDSWSPTTSDYLNLTLTPNCDVDRKPAALVGDALHFALAEGSGIIKYNMGE 244
Query: 248 NSLALFRTPVDLP-DIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTKVTTLHL 306
SL+ PV IVV M LG G+ G I+ +++ D+ DG W K + L
Sbjct: 245 CSLSRIHPPVVYKGGIVVMAMGGNLLGLGGIEGSILSMWS-SDVSLDGGVRWEKNRVIKL 303
Query: 307 DAMRPS 312
+++ PS
Sbjct: 304 ESLLPS 309
>Os08g0299700
Length = 1103
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 121/298 (40%), Gaps = 42/298 (14%)
Query: 21 LTDNVVHNLLLCLAP-EPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFS 79
L ++ +LL L P EP +L A V +W + + F RR+R + G PLLG
Sbjct: 8 LAPELLSEILLRLPPDEPGHLFRAALVCKEWLRAI-CDPGFLRRYRA-FHGSPPLLGLLH 65
Query: 80 NNXXXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGREDK-ELLVWDPL 138
V LA D + + D HGR L+ +D L+VWDP+
Sbjct: 66 RRQVLQGDP-----VRHLARTTAVPLFPDPTFRRALDCHHGRALLHASDDGWYLIVWDPV 120
Query: 139 SRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPPTTMASV 198
+ + +P P A+ C P+RVVFV D ASV
Sbjct: 121 TGEQHRVPEP---GIPWLMYTAAVFC--------AVSGCPFRVVFV-ATDDEDELVKASV 168
Query: 199 YSSRTNTWGPVATMD-ARVTFELK---------------QP---AVLDYTVYWLVNGRTQ 239
YSS T W A +D T++ + QP A++ +Y+ +
Sbjct: 169 YSSETGAWSKPAILDYGYQTWQERLQAITRGESYRTPYVQPRRGALVGDEIYFTLRNENA 228
Query: 240 IIEFEFDTNSLALFRTPV-DLPDIVVFPMEDGRLGYTGMMGPIVRVFAIE-DIYEDGD 295
II++ + N + P+ ++ DI + ME+G LGY + G + + IE D ED +
Sbjct: 229 IIKYNWGMNCFSKIDPPIREVYDIALMEMENGSLGYACIQGSSLYMDRIEVDALEDCN 286
>Os10g0136200 Cyclin-like F-box domain containing protein
Length = 402
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 12/238 (5%)
Query: 23 DNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSNNX 82
D+++ +LL L P+ L A+ V +WR +V S+ F RRFR + P PLLG F +
Sbjct: 35 DDLIQEILLRLPSHPSSLPRASLVCKQWRRLV-SDPAFLRRFRARHRDP-PLLGVFKDEL 92
Query: 83 XXXXXXXXXXXVVGLAPPEEAVSAGDGSVQHIYDARHGRVLMDGREDKELLVWDPLS--R 140
+ P A+ D + RHG VL+ E LVWDP+S R
Sbjct: 93 HHPVFRSVLDPPDLIPPDRFALRLDDYRAASLLGCRHGLVLIFNYNTCEFLVWDPVSGDR 152
Query: 141 RKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXX---XXXPYRVVFVYCGSDRPPTTMAS 197
R+ +P A++C ++VV + S AS
Sbjct: 153 RRVAVPQ-ELDGGERSVMNGAVLCAAGDDGHVHGGGFRSCHFKVVLI-GASKMDGRIFAS 210
Query: 198 VYSSRTNTWG-PVATMDARVTFELKQPAVL-DYTVYWLVN-GRTQIIEFEFDTNSLAL 252
+YSS T WG + T + PA+L ++YWL++ I+EF +T++LA+
Sbjct: 211 IYSSVTGEWGDAIFTGPVSTIYYFGSPAILVGNSLYWLLSVWGPHILEFNLETSTLAV 268
>Os10g0137000 Cyclin-like F-box domain containing protein
Length = 372
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 25/248 (10%)
Query: 23 DNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACFGRRFRLDYDGPTPLLGFFSNNX 82
D+++ +LL L P P+ L A+ V +WR +V ++ F RRFR + P PL+G F +
Sbjct: 22 DDLLSEILLHLPPRPSSLPRASLVCKRWRRLV-TDPAFHRRFRARHRNPPPLIGVFEDYL 80
Query: 83 XXXXXXXXXXXVVGLAPPEEA--------VSAGDGSVQHIYDARHGRVLMDGREDKELLV 134
L PP+ ++ +G H Y RHGR+L+ R E++V
Sbjct: 81 GYPFFRSV------LDPPDLIPRECFRLRLAEDEGGQWHFYGCRHGRLLLFNRAKNEIVV 134
Query: 135 WDPLSRRKDFIPMPPXXXXXXXXXXXALICEXXXXXXXXXXXXPYRVVFVYCGSDRPPTT 194
W P + + +PP +I P+RVV V +
Sbjct: 135 WVPDTGDHRQVAVPP-----EIDGKEKIIWNGAVLSAATADDGPFRVVLVGVAGNN-TQM 188
Query: 195 MASVYSSRTNTWGPVATMDA-RVTFELKQPAVL-DYTVYWLVNGR--TQIIEFEFDTNSL 250
A VY S + W + ++ A + F + P +L +YW+ G +++F+ D +L
Sbjct: 189 FACVYCSESGKWSDLISVAAPFLVFFFRDPGILAGNALYWMAYGERWLTVLQFDLDKQTL 248
Query: 251 ALFRTPVD 258
++ P D
Sbjct: 249 SVIEWPYD 256
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,743,954
Number of extensions: 616918
Number of successful extensions: 1415
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1392
Number of HSP's successfully gapped: 25
Length of query: 476
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 371
Effective length of database: 11,553,331
Effective search space: 4286285801
Effective search space used: 4286285801
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)