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Os07g0421000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.82 (0.0237) R2 : 0.81
β1 : 1.91 (0.087) R2dD : 0.209 R2D : 0.173
β2 : 2.39 (0.0616) R2dC : 0.629 R2C : 0.604
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.288 (0.0507) R2dN8 : 0.018 R2N8 : -0.0131
σ : 0.446
deviance : 90.88
__
_____
C
peak time of C : 17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.91 0.42 8.81 1.98 2.32 0.897 0.475 -0.615 0.352 17.1 80.98 1297 -- --
80.27 0.417 8.81 1.93 2.31 0.876 0.421 -- 0.343 17.1 81 1297 -- --
80.47 0.418 8.8 1.97 2.32 0.897 -- -0.53 0.353 17.1 80.88 1296 -- --
80.74 0.418 8.81 1.93 2.32 0.876 -- -- 0.344 17.1 81 1307 -- --
306.29 0.82 8.79 1.81 -- -0.862 -- -0.183 0.233 -- 80 1280 -- --
90.3 0.445 8.82 1.91 2.39 -- 0.48 -- 0.286 17 -- -- -- --
90.88 0.446 8.82 1.91 2.39 -- -- -- 0.288 17 -- -- -- --
300.02 0.81 8.8 1.74 -- -0.927 -- -- 0.2 -- 75 1948 -- --
168.63 0.605 8.8 -- 2.31 1.14 -- -- 0.353 17.2 85 2768 -- --
391.46 0.925 8.79 1.82 -- -- -- -- 0.227 -- -- -- -- --
187.13 0.64 8.87 -- 2.36 -- -- -- 0.0753 17 -- -- -- --
307.12 0.816 8.87 -- -- -1.67 -- -- -0.074 -- 75 366 -- --
479.26 1.02 8.84 -- -- -- -- -- 0.0246 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 69.28 humidity 70.0 90 > th dose dependent rect. 22 5
2 69.32 atmosphere 995.0 270 > th dose dependent rect. 22 2
3 69.35 atmosphere 995.0 90 > th dose dependent rect. 22 5
5 69.54 humidity 70.0 270 > th dose dependent rect. 23 1
10 70.03 temperature 15.0 270 > th dose independent rect. 24 22
16 70.31 atmosphere 1000.0 90 > th dose independent rect. 22 5
23 70.64 atmosphere 1010.0 270 < th dose independent rect. 11 10
27 70.79 humidity 80.0 270 > th dose independent rect. 21 4
30 70.85 atmosphere 1000.0 270 > th dose independent rect. 22 2
31 70.86 precipitation 0.1 270 < th dose independent rect. 3 2
32 70.86 temperature 15.0 270 > th dose independent rect. 1 20
33 70.86 precipitation 0.1 270 < th dose dependent rect. 3 2
34 70.91 wind 5.0 270 < th dose independent rect. 3 2
38 71.08 humidity 80.0 270 > th dose independent rect. 22 2
39 71.13 temperature 15.0 90 > th dose independent rect. 3 19
44 71.23 atmosphere 1010.0 270 < th dose independent rect. 15 15
45 71.23 atmosphere 995.0 10 > th dose dependent rect. 23 4
46 71.24 atmosphere 1015.0 270 < th dose independent rect. 24 22
47 71.25 wind 5.0 270 < th dose independent rect. 1 5
48 71.25 humidity 70.0 10 > th dose dependent rect. 22 5
59 71.45 wind 5.0 90 < th dose dependent rect. 3 4
63 71.49 precipitation 0.1 270 < th dose independent rect. 24 22
64 71.49 precipitation 0.1 270 < th dose dependent rect. 24 22
65 71.54 wind 9.0 270 < th dose independent rect. 5 22
67 71.56 wind 5.0 270 < th dose independent rect. 22 2
70 71.57 wind 9.0 270 < th dose dependent rect. 3 2
73 71.60 atmosphere 1015.0 270 < th dose independent rect. 1 20
76 71.62 precipitation 0.1 270 < th dose independent rect. 1 20
77 71.62 precipitation 0.1 270 < th dose dependent rect. 1 20
84 71.68 wind 5.0 90 < th dose independent rect. 22 5
85 71.73 wind 7.0 270 < th dose independent rect. 6 19
92 71.83 precipitation 0.1 90 < th dose independent rect. 3 19
93 71.83 precipitation 0.1 90 < th dose dependent rect. 3 19
97 71.85 wind 9.0 90 < th dose dependent rect. 22 5
101 71.89 temperature 10.0 90 > th dose independent rect. 22 5
102 71.89 temperature 30.0 90 < th dose independent rect. 22 5
103 71.89 humidity 50.0 90 > th dose independent rect. 22 5
107 71.89 radiation 1.0 90 < th dose independent rect. 22 5
113 71.89 atmosphere 1015.0 90 < th dose independent rect. 3 19
114 71.89 radiation 1.0 90 < th dose dependent rect. 22 5
120 71.90 temperature 15.0 270 > th dose independent rect. 5 22
127 71.95 precipitation 0.1 90 < th dose independent rect. 22 5
129 71.95 precipitation 0.1 90 < th dose dependent rect. 22 5
132 71.98 wind 7.0 10 < th dose dependent rect. 3 5
137 72.02 precipitation 0.1 90 < th dose independent rect. 3 5
140 72.02 precipitation 0.1 90 < th dose dependent rect. 3 5
149 72.08 temperature 30.0 90 < th dose dependent rect. 22 5
151 72.14 precipitation 0.1 270 < th dose independent rect. 1 5
152 72.14 precipitation 0.1 270 < th dose dependent rect. 1 5
159 72.23 precipitation 0.1 10 < th dose independent rect. 3 5
161 72.23 precipitation 0.1 10 < th dose dependent rect. 3 5
163 72.25 temperature 15.0 270 > th dose independent rect. 11 10
164 72.26 wind 1.0 270 > th dose independent rect. 3 1
177 72.31 wind 9.0 270 < th dose dependent rect. 22 2
179 72.33 wind 9.0 90 < th dose independent rect. 3 19
181 72.34 temperature 10.0 270 > th dose independent rect. 3 2
183 72.34 temperature 30.0 270 < th dose independent rect. 3 2
184 72.34 humidity 50.0 270 > th dose independent rect. 3 2
187 72.34 atmosphere 995.0 270 > th dose independent rect. 3 2
188 72.34 atmosphere 1010.0 270 < th dose independent rect. 3 2
190 72.34 radiation 20.0 270 < th dose independent rect. 3 2
195 72.35 radiation 1.0 270 < th dose dependent rect. 3 2
196 72.35 radiation 40.0 270 < th dose dependent rect. 3 2
201 72.38 temperature 15.0 270 > th dose independent rect. 16 14
206 72.42 radiation 1.0 270 < th dose independent rect. 3 2
240 72.52 precipitation 0.1 10 < th dose independent rect. 3 19
241 72.52 wind 9.0 270 < th dose dependent rect. 1 5
242 72.52 precipitation 0.1 10 < th dose dependent rect. 3 19
243 72.53 temperature 10.0 270 > th dose independent rect. 22 2
244 72.53 temperature 30.0 270 < th dose independent rect. 22 2
245 72.53 humidity 50.0 270 > th dose independent rect. 22 2
249 72.53 radiation 1.0 270 < th dose independent rect. 22 2
255 72.53 radiation 1.0 270 < th dose dependent rect. 22 2
270 72.60 precipitation 0.1 270 < th dose independent rect. 22 2
271 72.60 precipitation 0.1 270 < th dose dependent rect. 22 2
290 72.70 radiation 40.0 270 < th dose dependent rect. 15 15
321 72.86 temperature 10.0 90 > th dose independent rect. 3 5
323 72.86 temperature 30.0 90 < th dose independent rect. 3 5
324 72.86 humidity 50.0 90 > th dose independent rect. 3 5
326 72.86 atmosphere 995.0 90 > th dose independent rect. 3 5
327 72.86 atmosphere 1015.0 90 < th dose independent rect. 3 5
328 72.86 temperature 10.0 90 > th dose independent rect. 8 19
351 72.91 radiation 40.0 90 < th dose independent rect. 3 5
407 73.03 atmosphere 1010.0 270 < th dose independent rect. 1 5
410 73.04 temperature 30.0 270 < th dose dependent rect. 23 1
413 73.08 wind 5.0 10 < th dose independent rect. 3 5
414 73.08 temperature 10.0 270 > th dose independent rect. 1 5
416 73.08 temperature 30.0 270 < th dose independent rect. 1 5
417 73.08 humidity 50.0 270 > th dose independent rect. 1 5
420 73.08 atmosphere 995.0 270 > th dose independent rect. 1 5
422 73.08 radiation 20.0 270 < th dose independent rect. 1 5
425 73.08 temperature 10.0 270 > th dose independent rect. 6 19
443 73.15 radiation 40.0 270 < th dose dependent rect. 1 6
444 73.16 precipitation 0.1 90 < th dose independent rect. 8 19
446 73.16 precipitation 0.1 90 < th dose dependent rect. 8 19
453 73.19 atmosphere 995.0 90 > th dose independent rect. 3 19
492 73.30 wind 9.0 270 < th dose independent rect. 1 20
512 73.33 humidity 80.0 10 > th dose independent rect. 22 5
518 73.36 humidity 50.0 270 > th dose dependent rect. 3 2
556 73.45 atmosphere 995.0 90 > th dose dependent rect. 8 19
568 73.50 radiation 20.0 270 < th dose independent rect. 15 15
599 73.58 precipitation 0.1 270 < th dose independent rect. 6 19
602 73.58 precipitation 0.1 270 < th dose dependent rect. 6 19
610 73.61 precipitation 0.1 270 < th dose independent rect. 16 14
614 73.61 radiation 40.0 90 < th dose dependent rect. 3 6
616 73.61 precipitation 0.1 270 < th dose dependent rect. 16 14
638 73.70 temperature 10.0 270 > th dose dependent rect. 3 2
642 73.73 precipitation 0.1 10 < th dose independent rect. 8 19
643 73.73 precipitation 0.1 10 < th dose dependent rect. 8 19
645 73.74 wind 9.0 10 < th dose independent rect. 8 19
671 73.83 precipitation 0.1 270 < th dose independent rect. 5 21
672 73.83 precipitation 0.1 270 < th dose dependent rect. 5 21
675 73.84 temperature 10.0 10 > th dose independent rect. 3 5
678 73.84 temperature 30.0 10 < th dose independent rect. 3 5
679 73.84 humidity 50.0 10 > th dose independent rect. 3 5
681 73.84 atmosphere 995.0 10 > th dose independent rect. 3 5
682 73.84 atmosphere 1015.0 10 < th dose independent rect. 3 5
683 73.84 temperature 10.0 10 > th dose independent rect. 8 19
687 73.86 wind 9.0 270 < th dose independent rect. 24 22
698 73.90 wind 9.0 270 < th dose independent rect. 6 10
789 74.04 wind 9.0 90 < th dose dependent rect. 8 19
834 74.13 atmosphere 995.0 270 > th dose independent rect. 6 19
845 74.16 humidity 50.0 90 > th dose dependent rect. 3 5
858 74.17 temperature 10.0 270 > th dose independent rect. 21 14
859 74.17 humidity 50.0 270 > th dose independent rect. 21 14
860 74.17 atmosphere 995.0 270 > th dose independent rect. 21 14
864 74.17 radiation 1.0 270 < th dose independent rect. 1 19
883 74.18 atmosphere 1005.0 90 > th dose independent rect. 3 5
893 74.20 atmosphere 1005.0 270 > th dose independent rect. 3 2
894 74.20 wind 9.0 270 < th dose independent rect. 21 14
900 74.21 temperature 10.0 270 > th dose independent rect. 6 10
901 74.21 atmosphere 1015.0 270 < th dose independent rect. 6 10
914 74.26 atmosphere 995.0 90 > th dose independent rect. 8 19
915 74.26 temperature 10.0 270 > th dose dependent rect. 2 4
951 74.29 humidity 50.0 270 > th dose independent rect. 1 19
954 74.29 radiation 1.0 270 < th dose dependent rect. 1 19
980 74.30 wind 9.0 270 < th dose dependent rect. 6 19
982 74.32 precipitation 0.1 270 < th dose independent rect. 6 10
984 74.32 precipitation 0.1 270 < th dose dependent rect. 6 10
985 74.32 radiation 1.0 270 < th dose dependent rect. 2 17
993 74.36 humidity 90.0 720 < th dose dependent rect. 20 1