BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0273800 Os09g0273800|AK107960
(167 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0273800 Similar to Fimbriata-associated protein (Fragm... 272 9e-74
Os09g0274700 259 6e-70
Os07g0145300 188 2e-48
Os08g0375700 SKP1 component family protein 183 4e-47
Os07g0144800 177 3e-45
Os08g0375500 172 1e-43
Os07g0144900 159 7e-40
Os09g0274800 158 2e-39
Os09g0274432 152 9e-38
Os06g0113800 Similar to Kinetechore (Skp1p-like) protein-like 149 8e-37
Os11g0456300 Similar to Fimbriata-associated protein (Fragm... 145 2e-35
Os09g0272900 Similar to Skp1 (Fragment) 129 1e-30
Os10g0438100 Similar to Fimbriata-associated protein (Fragm... 120 5e-28
Os07g0625500 Similar to Fimbriata-associated protein (Fragm... 106 6e-24
Os09g0272700 106 7e-24
Os07g0624900 106 7e-24
Os09g0275200 Similar to Fimbriata-associated protein (Fragm... 102 9e-23
Os07g0625000 92 2e-19
Os07g0625200 82 2e-16
Os07g0625400 SKP1 component family protein 76 9e-15
Os07g0409500 SKP1 component family protein 74 5e-14
Os09g0539500 SKP1 component family protein 72 2e-13
Os02g0101600 SKP1 component family protein 68 3e-12
Os02g0225100 68 3e-12
>Os09g0273800 Similar to Fimbriata-associated protein (Fragment)
Length = 167
Score = 272 bits (695), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/155 (87%), Positives = 136/155 (87%)
Query: 13 SKILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHX 72
SKILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKH
Sbjct: 13 SKILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHA 72
Query: 73 XXXXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIK 132
EDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIK
Sbjct: 73 AAAAAAAEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIK 132
Query: 133 GKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFEN 167
GKTVQEIRDTFGIVNDFTP WAFEN
Sbjct: 133 GKTVQEIRDTFGIVNDFTPEEEEEIRKENEWAFEN 167
>Os09g0274700
Length = 165
Score = 259 bits (662), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/155 (85%), Positives = 133/155 (85%), Gaps = 2/155 (1%)
Query: 13 SKILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHX 72
SKILLISSDGQHFQVTEAEASMSKLVSNMIED CTENGVPLPNVASNVLAKVL+YCKKH
Sbjct: 13 SKILLISSDGQHFQVTEAEASMSKLVSNMIEDGCTENGVPLPNVASNVLAKVLEYCKKHA 72
Query: 73 XXXXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIK 132
EDVAVKDQELKSFDASFIDVDNTMLF LILAANYLNVPSLLDLACQHTADLIK
Sbjct: 73 AAAAA--EDVAVKDQELKSFDASFIDVDNTMLFNLILAANYLNVPSLLDLACQHTADLIK 130
Query: 133 GKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFEN 167
GKTVQEIRD FGIVNDFTP WAFEN
Sbjct: 131 GKTVQEIRDMFGIVNDFTPEEEEEIRKENEWAFEN 165
>Os07g0145300
Length = 164
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 109/152 (71%), Gaps = 7/152 (4%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
ILLISSDG+HF V A AS+S+LVSNMIEDDCT NGVPLPNVAS VLAKV++YC KH
Sbjct: 20 ILLISSDGEHFNVPSAAASLSQLVSNMIEDDCTTNGVPLPNVASKVLAKVIEYCIKHAAA 79
Query: 75 XXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIKGK 134
+D LKSFDA FIDVD ML+ L+LA+N++N+ SLLDL CQHTA+LIKGK
Sbjct: 80 GEEEEKD-------LKSFDAEFIDVDKNMLYDLLLASNFMNIKSLLDLCCQHTANLIKGK 132
Query: 135 TVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
+ ++IR FGI NDFTP WAFE
Sbjct: 133 SPEQIRKEFGIKNDFTPEEEEEIRKENTWAFE 164
>Os08g0375700 SKP1 component family protein
Length = 169
Score = 183 bits (465), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 111/158 (70%), Gaps = 5/158 (3%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXX- 73
ILLISSDG+ F+++EA AS SK +S+MIEDDCT+NGVPLPNV + VLAKV++Y KKH
Sbjct: 12 ILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEYFKKHAAV 71
Query: 74 ----XXXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTAD 129
D A +++ELKSFDA F+DVD TM+F LILAAN+LN LLDL CQH AD
Sbjct: 72 TPKPATEAVAADKAKREEELKSFDAEFVDVDRTMVFELILAANFLNAQDLLDLTCQHAAD 131
Query: 130 LIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFEN 167
LIK +V+E+R+ F I NDFTP WAF+N
Sbjct: 132 LIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN 169
>Os07g0144800
Length = 157
Score = 177 bits (450), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 112/153 (73%), Gaps = 9/153 (5%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
ILLISSDG+HF V A AS+S+LVSNMIE+DCT NGVPLPNVAS VLAKV++YC KH
Sbjct: 13 ILLISSDGEHFNVPSAAASLSQLVSNMIENDCTTNGVPLPNVASKVLAKVIEYCVKHAAA 72
Query: 75 XXXXXEDVAVKDQELKSFDASF-IDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIKG 133
+++ELKSFDA F IDVD ML+GL+LA+N+LN+ SLLDL CQHTA+LIKG
Sbjct: 73 -------AEDEEKELKSFDAEFMIDVDKNMLYGLLLASNFLNIKSLLDLCCQHTANLIKG 125
Query: 134 KTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
K+ ++IR FGI NDFTP WAFE
Sbjct: 126 KSPEQIRKEFGIKNDFTP-EEEEIRKENTWAFE 157
>Os08g0375500
Length = 169
Score = 172 bits (435), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 110/158 (69%), Gaps = 5/158 (3%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXX- 73
ILLISSDG+ F+++EA AS SK +S+MIEDDCT+NGVPLPNV + VL KV++Y KKH
Sbjct: 12 ILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLVKVVEYFKKHAAV 71
Query: 74 ----XXXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTAD 129
D A +++ELKSFDA F+DVD TMLF LILAAN+LN LLDL CQH AD
Sbjct: 72 TPKPATEAVVADKAKREEELKSFDAEFVDVDRTMLFELILAANFLNAQDLLDLTCQHAAD 131
Query: 130 LIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFEN 167
LIK +V+E+R+ F I NDFTP WAF+N
Sbjct: 132 LIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN 169
>Os07g0144900
Length = 172
Score = 159 bits (403), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
I+LIS+DG+ F+VTEA AS S+L+SNMIEDDCTENGV LPNV ++L V+DYC H
Sbjct: 17 IILISADGKRFEVTEAVASQSQLISNMIEDDCTENGVRLPNVDGDILTMVVDYCNMHAGD 76
Query: 75 XXXXXEDVAVK--DQELKSFDASFID-VDNTMLFGLILAANYLNVPSLLDLACQHTADLI 131
+ + ++ELK FDA + ++N +LF LILAAN+LN+ SLLD+ CQ AD++
Sbjct: 77 AAAAGDTMKASSTEEELKKFDAELVQALENPVLFKLILAANFLNIKSLLDMTCQRVADMM 136
Query: 132 KGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFEN 167
GKT +++R+TF I NDFTP WAF++
Sbjct: 137 SGKTPEQMRETFSIENDFTPEEEAAIRQENAWAFDD 172
>Os09g0274800
Length = 172
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 100/154 (64%), Gaps = 2/154 (1%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENG-VPLPNVASNVLAKVLDYCKKHXX 73
ILLISSDG F+++EA AS+SK + NMIEDDC NG +PL NVAS++LAKV++YC KH
Sbjct: 18 ILLISSDGAKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVASDILAKVVEYCNKHAA 77
Query: 74 XXXXXXEDVAVK-DQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIK 132
++EL FDA F+ VD LFGLI AAN+LN+P LL+L CQ ADLIK
Sbjct: 78 ATATATAAAKASGEEELSKFDAEFVSVDRKKLFGLINAANFLNMPCLLELTCQRAADLIK 137
Query: 133 GKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
+++R+ FGI NDFTP WA+E
Sbjct: 138 DMMPEQVREVFGIENDFTPEEEAEVRNENAWAYE 171
>Os09g0274432
Length = 167
Score = 152 bits (385), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 103/153 (67%), Gaps = 5/153 (3%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENG-VPLPNVASNVLAKVLDYCKKHXX 73
ILL+SSDG F+++EA AS+SK + NMIEDDC NG +PL NVA+++LA V++YC +H
Sbjct: 18 ILLVSSDGVKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVAADILAMVVEYCNRHAA 77
Query: 74 XXXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIKG 133
+ +++ ++ FDA F+++D LFGLI AAN+LN+P LL+L CQ TADLIK
Sbjct: 78 AAAN----ASGQEELIRKFDAEFVNIDRKKLFGLINAANFLNMPCLLELTCQRTADLIKD 133
Query: 134 KTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
+++R+ FGI NDFTP WA+E
Sbjct: 134 MMPEQVREVFGIENDFTPEEEAEVRNENAWAYE 166
>Os06g0113800 Similar to Kinetechore (Skp1p-like) protein-like
Length = 166
Score = 149 bits (376), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENG---VPLPNVASNVLAKVLDYCKKH 71
I +ISSDG+ F++TEA ASMS+++ +MIED CT +G + LPNVA + LAKV++YC KH
Sbjct: 13 IKVISSDGEAFEMTEAAASMSRILLHMIEDGCTGDGGAGITLPNVAGSALAKVIEYCTKH 72
Query: 72 XXXXXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLI 131
+ELK FD F++V ML+ LI+AAN++ V LL LA Q TA+LI
Sbjct: 73 AIAAAEGSSSSRKAKEELKKFDVEFMEVGIDMLYDLIMAANFMGVEGLLSLAAQRTAELI 132
Query: 132 KGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAF 165
KGK+ ++IR+ FGI ND TP WAF
Sbjct: 133 KGKSPEQIREMFGIKNDHTPEEEEQIRKEYEWAF 166
>Os11g0456300 Similar to Fimbriata-associated protein (Fragment)
Length = 173
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 98/164 (59%), Gaps = 12/164 (7%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
I L SSDG+ F+V E A S+ + +MIEDDC +NG+PLPNV S +L+KV++YC KH
Sbjct: 10 ITLKSSDGEEFEVEEPVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNKHVHA 69
Query: 75 XXXXXEDVAV------------KDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDL 122
A ++LK++DA F+ VD LF LILAANYLN+ LLDL
Sbjct: 70 AAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKGLLDL 129
Query: 123 ACQHTADLIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
CQ AD+IKGKT +EIR TF I NDFTP WAFE
Sbjct: 130 TCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173
>Os09g0272900 Similar to Skp1 (Fragment)
Length = 198
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 92/145 (63%), Gaps = 8/145 (5%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLV-SNMIEDDCTE-NGVPLPNVASNVLAKVLDYCKKHX 72
+ LISSDG F+V EA +S+ V M +DD NG+PLPNVA +VLAKV++YC KH
Sbjct: 39 VTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKVVEYCTKHA 98
Query: 73 XXXXXXXEDVAVK----DQEL--KSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQH 126
K ++EL KSFD FI VDN ML+ L+ AA+ + + L+DLACQ
Sbjct: 99 SAAAAAINADTAKTSKEEEELMMKSFDDEFILVDNHMLYSLLTAADAMRIQGLMDLACQR 158
Query: 127 TADLIKGKTVQEIRDTFGIVNDFTP 151
AD+IKGKT +++R T GI NDFTP
Sbjct: 159 LADMIKGKTSEQMRQTLGITNDFTP 183
>Os10g0438100 Similar to Fimbriata-associated protein (Fragment)
Length = 220
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 27/181 (14%)
Query: 14 KILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXX 73
K++L+S DG + A A +SK + MIED+C +P+ V S+VLA +++YC++H
Sbjct: 40 KLVLVSDDGVEVLASVAAARVSKTLRGMIEDECATGAIPIAGVHSDVLALLVEYCERHAP 99
Query: 74 XXXXXXED----------------------VAVKDQE-----LKSFDASFIDVDNTMLFG 106
D V D + LK+FD F+DVDN+ LF
Sbjct: 100 HYDPEASDRDRYPFPPFPVELPPTASSIKPVTFVDPDADPHGLKAFDKKFLDVDNSTLFE 159
Query: 107 LILAANYLNVPSLLDLACQHTADLIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
+I+AANYLN+ LLD AC AD ++GK +EIRD F I ND+TP WAFE
Sbjct: 160 IIMAANYLNIEELLDDACTAVADKMRGKKPEEIRDIFEIENDYTPEQEAEVRRENAWAFE 219
Query: 167 N 167
+
Sbjct: 220 D 220
>Os07g0625500 Similar to Fimbriata-associated protein (Fragment)
Length = 174
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDD-CTENGVPLPNVASNVLAKVLDYCKKHXX 73
I L S++G+ F VTEA A S + +M++D C + G PLPNV S LA+V+ YC +H
Sbjct: 25 ITLTSNEGKAFVVTEASARQSATIRSMVDDGGCVDKGFPLPNVDSKTLARVIQYCDEHGN 84
Query: 74 XXXXXXEDVAVKDQELKSFDASFI---DVDNTMLFGLILAANYLNVPSLLDLACQHTADL 130
++ A L FD FI D D L+ + +AANYL++ LL L Q AD
Sbjct: 85 KEPHTVDERAA----LAKFDRDFIAELDADKAFLYDVTMAANYLHIQGLLALTTQCVADT 140
Query: 131 IKGKTVQEIRDTFGIVNDFT 150
IKGKT +EIR FGI D T
Sbjct: 141 IKGKTPEEIRTAFGIEYDLT 160
>Os09g0272700
Length = 142
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 79/133 (59%), Gaps = 10/133 (7%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
+ LISSD +HF+V EA A + + +NG+P+PNVA NV+AK YC KH
Sbjct: 9 VELISSDEEHFEVEEAVARL--------DHHAGDNGIPIPNVADNVIAK--RYCMKHATL 58
Query: 75 XXXXXEDVAVKDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIKGK 134
+ A+ + ELK FD FI VDN L LI AAN + V L+DLACQ AD++K K
Sbjct: 59 SSGTGDMKAMHEDELKKFDRVFIKVDNDTLRRLISAANVMGVKGLIDLACQRVADMLKAK 118
Query: 135 TVQEIRDTFGIVN 147
++++R T GI N
Sbjct: 119 RLKKMRQTSGINN 131
>Os07g0624900
Length = 200
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMI--------EDDCTENGVPLPNVASNVLAKVLD 66
I L S DG+ VTEA A +SK ++ MI D C +P P++ + L V+
Sbjct: 51 IHLKSKDGKQHDVTEASARLSKTIAGMILAGGGGGGADQC----IPTPDIDHDTLRVVMQ 106
Query: 67 YCKKHXXXXXXXXEDVAVKDQELKSFDASFID-VDNTMLFGLILAANYLNVPSLLDLACQ 125
YC KH +++LK +D F+D +D LF +I AANYL++ LLDL C+
Sbjct: 107 YCDKHAADD--------ADEEDLKEWDEDFVDELDQDALFDVIAAANYLDIDGLLDLTCK 158
Query: 126 HTADLIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFEN 167
AD IKGKT +EIR F IVND + WAFE
Sbjct: 159 RVADTIKGKTPEEIRKEFNIVNDLSKEEEEEIRRENPWAFEQ 200
>Os09g0275200 Similar to Fimbriata-associated protein (Fragment)
Length = 160
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
I L+S DG+ F+V A + K + MI+ +PLPNVAS +LA+V+DY +H
Sbjct: 16 IDLVSKDGERFEVARDAALLCKTLRWMIKGGYGR--IPLPNVASPILARVVDYLARHAAA 73
Query: 75 XXXXXEDVAVKDQELKSFDASFI-DVDNTMLFGLILAANYLNVPSLLDLACQHTADLIKG 133
A+ D L FD F+ VD LF L+LAANYL LLDLAC+ A ++ G
Sbjct: 74 A------AAMDDDGLDRFDRDFLAGVDQDTLFDLLLAANYLQADGLLDLACKKVAAMMTG 127
Query: 134 KTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAF 165
K+ +++R+ F IVND TP WA
Sbjct: 128 KSPEQMREIFHIVNDLTPEEEKEIREDIAWAL 159
>Os07g0625000
Length = 724
Score = 92.0 bits (227), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 21 DGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXXXXXXXE 80
DG+ +VTEA A +SK++ + I+ +PLP+V L KV++YC +H E
Sbjct: 115 DGEPVEVTEASARISKVIGDKIDAGRGGEAIPLPHVDKKTLKKVIEYCDEHANENSDTDE 174
Query: 81 DVAVKDQELKSFDASFIDV----DNTMLFGLILAANYLNVPSLLDLACQHTADLIKGKTV 136
+ +ELK++D +FID D + LF ++LA++YL + LLDL Q AD K KT
Sbjct: 175 ----QKEELKNWDKAFIDELDEDDGSFLFLVLLASSYLKIDGLLDLTYQRVADNSKAKTT 230
Query: 137 QEIRDTFGIV 146
+EIR TF +
Sbjct: 231 EEIRKTFSTI 240
>Os07g0625200
Length = 221
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 7/114 (6%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXX 74
I L SSDG+ +V EA A +SK + N+I+D + +PLP+V+ L KV++YC KH
Sbjct: 101 ITLESSDGEVVKVKEASARLSKTIGNIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHADE 160
Query: 75 XXXXXEDVAVKDQELKSFDASFID---VDNTMLFGLILAANYLNVPSLLDLACQ 125
E + +ELK++D +FID D+ L +I+A+NYL + L +LA Q
Sbjct: 161 KSDTDE----QKEELKNWDKAFIDELAEDDDSLVKVIMASNYLKIDGLHNLASQ 210
>Os07g0625400 SKP1 component family protein
Length = 182
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 33 SMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHXXXXXXXXEDVAVKDQELKSF 92
+SKLV +MI++ C ++G+PLP V + K+ +Y KH +ELK +
Sbjct: 51 RISKLVGDMIDNVCADHGIPLPKVDIKTVRKMAEYMNKHFAI---------TNKEELKIW 101
Query: 93 DASFI-----DVDNTMLFGLILAANYLNVPSLLDLACQHTADLIK-GKTVQEIRDTFGIV 146
D FI D D LF +I A+ + LLDLA A IK GK + EIR G+
Sbjct: 102 DEGFINELDGDEDKYSLFKIIRASERVGFYGLLDLASDMVARKIKAGKAIDEIRKFLGVE 161
Query: 147 NDFTPXXXXXXXXXXXWAFE 166
DFT WAFE
Sbjct: 162 KDFTKEEEEKIRRENAWAFE 181
>Os07g0409500 SKP1 component family protein
Length = 190
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 20 SDGQHFQVTEAEASMSKLVSNMIED-DCTENG--VPLPN-VASNVLAKVLDYCKKHXXXX 75
SDGQ F + A A +S + M + ++G + LP+ ++S + KV +YC KH
Sbjct: 22 SDGQAFHMPVAAAMLSTAIRKMFDKYPSIDHGGVIELPHQISSGIFPKVKEYCTKHAKVD 81
Query: 76 XXXXEDVAV---------------KDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLL 120
V+ ++++LK++D F++++ L L+L A+ L++ L
Sbjct: 82 DKGNPTVSTNTGAAAAASSSSTDDEEEDLKNWDKEFVNMEVKPLHDLLLVAHLLDIKGLF 141
Query: 121 DLACQHTADLIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAF 165
+ C+ AD++KGKT +E+R I NDFT W F
Sbjct: 142 HITCRKVADMLKGKTSEEMRQILNIRNDFTEEEDKAIKEQNPWVF 186
>Os09g0539500 SKP1 component family protein
Length = 79
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 37/57 (64%)
Query: 110 AANYLNVPSLLDLACQHTADLIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAFE 166
AANYLN+ LLDL CQ AD+IKGKT +EIR TF I NDFTP WAFE
Sbjct: 23 AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 79
>Os02g0101600 SKP1 component family protein
Length = 101
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKH 71
I L SSDG+ F+V EA S+ + +MIED C +NG+PLPNV S +L+KV++YC KH
Sbjct: 12 ITLKSSDGEEFEV-EAVGMESQTIRHMIEDKCADNGIPLPNVNSKILSKVIEYCNKH 67
>Os02g0225100
Length = 198
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 53 LPNVASNVLAKVLDYCKKHXXXXXXXXEDVAVK------DQELKSFDASFID-VDNTMLF 105
+P VA VLA+V DYC +H D L FD +D D +
Sbjct: 74 VPGVARPVLARVADYCDRHYGGGGGGEGGEFAAPEGYGFDDPLARFDDELMDGADVGTVV 133
Query: 106 GLILAANYLNVPSLLDLACQHTADLIKGKTVQEIRDTFGIVNDFTPXXXXXXXXXXXWAF 165
L+ AA +L V L DLA + A ++G+TV+ IR FGI ND+T WAF
Sbjct: 134 DLLRAAAFLRVERLADLASREVAACMRGRTVEGIRQVFGIANDYTDEEEQDVRKENSWAF 193
Query: 166 E 166
+
Sbjct: 194 D 194
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,932,923
Number of extensions: 128111
Number of successful extensions: 302
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 274
Number of HSP's successfully gapped: 24
Length of query: 167
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 74
Effective length of database: 12,179,899
Effective search space: 901312526
Effective search space used: 901312526
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)