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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0273800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Fimbriata-associated protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.25 (0.0181) R2 : 0.0126
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0918 (0.0381) R2dN8 : 0.0163 R2N8 : 0.0126
σ : 0.34
deviance : 53.18
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.18 0.326 3.24 0.166 0.494 -0.356 3.9 -3.64 -0.0597 1.5 0.9923 273 -- --
51.43 0.337 3.25 0.0208 0.116 0.122 0.221 -- -0.0872 16.2 0.9923 273 -- --
51.2 0.333 3.26 0.00827 0.0709 -0.243 -- -0.499 -0.109 4.77 44.08 813 -- --
51.46 0.334 3.26 -0.00596 0.0421 -0.237 -- -- -0.114 4.08 55.94 869 -- --
51.25 0.333 3.26 0.0212 -- -0.203 -- -0.447 -0.105 -- 56.55 864 -- --
51.85 0.338 3.26 0.0166 0.154 -- 0.0335 -- -0.0886 20.4 -- -- -- --
51.86 0.337 3.26 0.0155 0.154 -- -- -- -0.0887 20.5 -- -- -- --
51.54 0.334 3.26 -0.00444 -- -0.215 -- -- -0.117 -- 54.37 919 -- --
51.36 0.334 3.26 -- 0.0584 -0.191 -- -- -0.113 23.7 54.43 863 -- --
53.18 0.341 3.25 0.0147 -- -- -- -- -0.0902 -- -- -- -- --
51.86 0.337 3.26 -- 0.154 -- -- -- -0.0904 20.5 -- -- -- --
51.54 0.334 3.26 -- -- -0.213 -- -- -0.114 -- 54.28 870 -- --
53.18 0.34 3.25 -- -- -- -- -- -0.0918 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.66 temperature 25.0 30 < th dose independent rect. 2 1
2 44.71 wind 3.0 30 < th dose independent rect. 2 1
3 44.71 wind 3.0 30 < th dose dependent rect. 2 1
10 44.75 temperature 10.0 30 > th dose independent rect. 2 1
13 44.75 humidity 50.0 30 > th dose independent rect. 2 1
17 44.75 atmosphere 995.0 30 > th dose independent rect. 2 1
18 44.75 atmosphere 1010.0 30 < th dose independent rect. 2 1
20 44.75 radiation 1.0 30 < th dose independent rect. 2 1
25 44.75 precipitation 0.1 30 < th dose independent rect. 2 1
26 44.75 temperature 10.0 30 > th dose independent rect. 3 23
27 44.75 atmosphere 1015.0 30 < th dose dependent rect. 2 1
28 44.75 radiation 1.0 30 < th dose dependent rect. 2 1
33 44.75 precipitation 0.1 30 < th dose dependent rect. 2 1
34 44.76 temperature 10.0 30 > th dose dependent rect. 2 1
35 44.76 humidity 50.0 30 > th dose dependent rect. 2 1
39 44.77 atmosphere 1005.0 30 > th dose dependent rect. 2 1
43 44.82 atmosphere 995.0 30 > th dose dependent rect. 2 1
46 44.86 atmosphere 1005.0 30 > th dose independent rect. 2 1
48 44.88 temperature 30.0 30 < th dose dependent rect. 2 1
61 45.28 wind 1.0 30 > th dose independent rect. 2 1
103 46.39 wind 9.0 30 < th dose independent rect. 3 23
109 47.42 radiation 1.0 270 < th dose dependent rect. 6 23
110 47.53 radiation 1.0 270 < th dose independent rect. 6 23
113 47.75 temperature 25.0 30 > th dose dependent rect. 16 19
119 47.82 temperature 25.0 270 > th dose independent rect. 1 1
123 47.99 temperature 15.0 1440 > th dose independent rect. 3 1
130 48.13 temperature 25.0 30 > th dose dependent sin 11 NA
132 48.15 atmosphere 1005.0 10 > th dose dependent rect. 2 3
134 48.15 radiation 1.0 270 < th dose dependent rect. 14 23
141 48.19 temperature 15.0 720 > th dose independent rect. 3 8
142 48.19 radiation 1.0 270 < th dose dependent no NA NA
157 48.27 temperature 15.0 720 > th dose independent rect. 3 12
159 48.28 atmosphere 995.0 30 > th dose independent rect. 3 23
162 48.35 atmosphere 1015.0 1440 < th dose independent rect. 3 1
166 48.38 precipitation 0.1 30 < th dose independent rect. 3 23
167 48.38 temperature 25.0 10 > th dose dependent rect. 16 4
168 48.38 temperature 25.0 30 > th dose dependent rect. 16 6
171 48.38 precipitation 0.1 30 < th dose dependent rect. 3 23
172 48.39 atmosphere 1015.0 720 < th dose independent rect. 3 8
174 48.39 humidity 50.0 30 > th dose dependent rect. 3 23
182 48.41 temperature 25.0 30 > th dose dependent rect. 16 10
190 48.42 radiation 1.0 270 < th dose dependent rect. 19 23
202 48.46 radiation 1.0 270 < th dose independent rect. 19 23
203 48.47 atmosphere 1015.0 720 < th dose independent rect. 23 16
214 48.50 radiation 1.0 270 > th dose independent rect. 12 23
227 48.55 radiation 1.0 270 < th dose independent rect. 16 23
230 48.56 humidity 50.0 30 > th dose independent rect. 3 23
232 48.57 temperature 15.0 1440 > th dose independent rect. 8 14
234 48.57 wind 9.0 30 < th dose dependent rect. 3 23
245 48.61 radiation 1.0 270 < th dose independent rect. 14 23
250 48.62 radiation 1.0 270 < th dose independent no NA NA
260 48.63 radiation 1.0 720 < th dose dependent rect. 1 13
269 48.65 radiation 1.0 270 > th dose independent no NA NA
270 48.65 radiation 1.0 270 > th dose independent rect. 4 15
352 48.77 temperature 15.0 10 > th dose dependent rect. 5 12
353 48.78 temperature 15.0 1440 > th dose independent rect. 8 12
356 48.78 temperature 10.0 10 > th dose dependent rect. 17 10
372 48.84 temperature 15.0 720 > th dose independent rect. 23 16
377 48.85 temperature 15.0 10 > th dose dependent rect. 3 14
378 48.86 temperature 15.0 720 > th dose independent rect. 5 10
380 48.87 temperature 30.0 270 > th dose independent sin 13 NA
381 48.87 radiation 20.0 270 > th dose independent rect. 16 1
396 48.87 temperature 25.0 270 > th dose dependent rect. 1 1
398 48.87 humidity 80.0 10 < th dose dependent rect. 17 17
400 48.88 humidity 80.0 10 > th dose independent rect. 3 23
401 48.88 humidity 90.0 90 < th dose dependent rect. 16 19
404 48.89 radiation 1.0 720 < th dose independent rect. 1 13
415 48.91 temperature 30.0 270 < th dose independent sin 13 NA
431 48.92 humidity 60.0 90 > th dose independent rect. 13 12
436 48.92 radiation 20.0 720 > th dose dependent rect. 15 17
448 48.94 radiation 1.0 720 < th dose dependent rect. 3 15
451 48.95 radiation 1.0 720 < th dose independent rect. 9 1
453 48.95 radiation 1.0 720 < th dose dependent rect. 9 1
459 48.96 humidity 90.0 10 < th dose dependent rect. 17 6
463 48.97 temperature 30.0 90 < th dose independent rect. 13 12
465 48.97 temperature 25.0 90 > th dose dependent rect. 1 4
470 48.98 temperature 30.0 270 > th dose independent rect. 15 4
481 48.98 temperature 30.0 270 < th dose independent rect. 15 14
490 48.99 humidity 70.0 90 < th dose independent rect. 16 17
492 48.99 temperature 25.0 720 > th dose dependent rect. 5 3
494 48.99 temperature 25.0 720 > th dose dependent rect. 4 5
496 48.99 humidity 50.0 270 > th dose dependent rect. 10 19
499 49.00 temperature 15.0 720 > th dose independent rect. 3 4
504 49.01 humidity 90.0 270 < th dose independent rect. 1 1
513 49.02 radiation 1.0 720 < th dose dependent sin 4 NA
529 49.04 humidity 50.0 43200 > th dose independent rect. 3 1
533 49.04 temperature 25.0 270 > th dose dependent rect. 16 1
545 49.05 temperature 15.0 1440 > th dose independent rect. 2 20
550 49.06 temperature 15.0 1440 > th dose independent sin 0 NA
563 49.06 humidity 70.0 10 < th dose independent rect. 17 15
569 49.06 temperature 15.0 1440 > th dose independent rect. 5 23
574 49.06 humidity 80.0 10 < th dose dependent rect. 17 15
578 49.07 temperature 25.0 10 > th dose independent rect. 16 4
584 49.07 temperature 25.0 270 > th dose dependent rect. 14 8
587 49.08 temperature 15.0 1440 > th dose independent rect. 3 17
600 49.10 humidity 70.0 270 < th dose independent rect. 16 3
601 49.10 radiation 1.0 720 < th dose independent rect. 9 3
606 49.10 radiation 1.0 720 < th dose dependent rect. 9 3
611 49.10 temperature 10.0 90 > th dose dependent rect. 5 14
617 49.11 temperature 15.0 720 > th dose independent rect. 3 6
626 49.11 temperature 20.0 10 > th dose independent rect. 3 14
642 49.12 radiation 10.0 270 > th dose independent sin 12 NA
669 49.13 radiation 20.0 720 > th dose independent rect. 15 17
670 49.13 humidity 50.0 720 > th dose independent rect. 3 22
685 49.15 humidity 50.0 270 > th dose dependent sin 13 NA
693 49.15 radiation 1.0 270 < th dose dependent rect. 3 23
695 49.16 temperature 15.0 720 > th dose independent rect. 1 9
697 49.16 humidity 50.0 720 > th dose independent rect. 3 14
706 49.17 wind 1.0 1440 > th dose independent rect. 2 1
708 49.17 atmosphere 1015.0 720 < th dose independent rect. 1 9
712 49.17 radiation 1.0 720 > th dose independent rect. 18 21
717 49.17 temperature 30.0 10 < th dose dependent rect. 2 11
718 49.17 radiation 10.0 270 > th dose dependent rect. 16 15
754 49.19 temperature 15.0 1440 > th dose independent rect. 2 22
758 49.19 humidity 90.0 270 > th dose dependent rect. 10 4
765 49.20 temperature 30.0 270 < th dose independent rect. 17 12
767 49.20 temperature 15.0 1440 > th dose independent rect. 8 20
778 49.21 humidity 70.0 10 < th dose independent rect. 17 3
790 49.21 temperature 15.0 1440 > th dose independent rect. 17 20
804 49.22 temperature 15.0 1440 > th dose independent rect. 8 16
816 49.22 radiation 1.0 270 < th dose dependent rect. 14 15
821 49.23 radiation 1.0 270 < th dose independent rect. 13 16
826 49.23 radiation 10.0 270 > th dose independent rect. 14 20
845 49.24 humidity 60.0 720 > th dose independent rect. 14 1
849 49.24 humidity 60.0 270 > th dose independent rect. 13 15
856 49.24 humidity 70.0 270 < th dose dependent rect. 15 2
857 49.24 radiation 10.0 270 > th dose dependent rect. 16 2
879 49.25 radiation 1.0 720 < th dose independent sin 3 NA
883 49.25 humidity 90.0 270 > th dose independent rect. 10 4
899 49.25 atmosphere 1015.0 30 < th dose independent rect. 3 23
935 49.26 humidity 90.0 10 < th dose dependent rect. 17 13
951 49.27 wind 7.0 10 < th dose independent rect. 3 14
952 49.27 radiation 1.0 720 < th dose independent rect. 2 16
963 49.28 atmosphere 1015.0 1440 < th dose independent rect. 17 2
967 49.28 wind 7.0 270 < th dose independent rect. 5 13
978 49.28 wind 7.0 10 < th dose independent rect. 5 21
983 49.28 humidity 80.0 90 < th dose dependent sin 11 NA
984 49.28 humidity 70.0 270 < th dose dependent rect. 15 5