Os11g0456300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fimbriata-associated protein (Fragment).
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Os11g0456300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fimbriata-associated protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.75 | 0.198 | 14.7 | -0.0888 | 0.32 | 0.503 | 0.145 | -1.67 | 0.0431 | 16.9 | 25.08 | 12 | -- | -- |
| 18.81 | 0.202 | 14.7 | 0.097 | 0.32 | 0.395 | -0.127 | -- | 0.0795 | 16.6 | 24.34 | 22 | -- | -- |
| 17.78 | 0.196 | 14.7 | -0.0688 | 0.325 | 0.499 | -- | -1.62 | 0.0514 | 16.9 | 25.29 | 14 | -- | -- |
| 18.82 | 0.202 | 14.7 | 0.101 | 0.331 | 0.366 | -- | -- | 0.0859 | 16.7 | 24.48 | 22 | -- | -- |
| 20.56 | 0.211 | 14.7 | -0.177 | -- | 0.744 | -- | -1.64 | 0.00406 | -- | 24.21 | 149 | -- | -- |
| 20.83 | 0.214 | 14.7 | 0.157 | 0.466 | -- | 0.0243 | -- | 0.125 | 16.2 | -- | -- | -- | -- |
| 20.83 | 0.214 | 14.7 | 0.158 | 0.466 | -- | -- | -- | 0.125 | 16.2 | -- | -- | -- | -- |
| 21.96 | 0.218 | 14.7 | 0.0407 | -- | 0.626 | -- | -- | 0.0543 | -- | 24.3 | 163 | -- | -- |
| 19.06 | 0.203 | 14.7 | -- | 0.32 | 0.388 | -- | -- | 0.0699 | 16.8 | 24.2 | 22 | -- | -- |
| 32.56 | 0.267 | 14.7 | 0.139 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 21.49 | 0.217 | 14.7 | -- | 0.463 | -- | -- | -- | 0.108 | 16.2 | -- | -- | -- | -- |
| 22 | 0.218 | 14.7 | -- | -- | 0.632 | -- | -- | 0.0488 | -- | 24.27 | 163 | -- | -- |
| 33.07 | 0.268 | 14.7 | -- | -- | -- | -- | -- | 0.0976 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 15.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 3 | 15.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 6 | 15.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 22 | 15.68 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 38 | 15.91 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 119 | 16.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 168 | 16.81 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 14 |
| 249 | 17.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 309 | 17.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 316 | 17.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 321 | 17.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 349 | 17.20 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 380 | 17.27 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 395 | 17.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 419 | 17.33 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 420 | 17.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 445 | 17.35 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 488 | 17.39 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 496 | 17.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 500 | 17.41 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 533 | 17.44 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 535 | 17.44 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 536 | 17.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 575 | 17.47 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 578 | 17.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 586 | 17.48 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 587 | 17.48 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 588 | 17.48 | radiation | 30 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 593 | 17.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 612 | 17.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 640 | 17.51 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 648 | 17.51 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 653 | 17.52 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 659 | 17.52 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 662 | 17.52 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 670 | 17.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 685 | 17.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 713 | 17.54 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 725 | 17.54 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 741 | 17.54 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 753 | 17.55 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 762 | 17.55 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 766 | 17.55 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 767 | 17.55 | humidity | 90 | 43200 | > th | dose dependent | sin | 3 | NA |
| 769 | 17.55 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 774 | 17.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 797 | 17.56 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 807 | 17.56 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 855 | 17.57 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 856 | 17.57 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 868 | 17.57 | radiation | 1 | 43200 | < th | dose dependent | sin | 10 | NA |
| 873 | 17.57 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 902 | 17.58 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 943 | 17.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 944 | 17.58 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 948 | 17.58 | radiation | 1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 986 | 17.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 21 |
| 991 | 17.58 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 992 | 17.59 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 995 | 17.59 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 1000 | 17.59 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 8 |