BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0456300 Os11g0456300|AK111678
(173 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0456300 Similar to Fimbriata-associated protein (Fragm... 248 1e-66
Os07g0145300 147 3e-36
Os08g0375700 SKP1 component family protein 146 8e-36
Os07g0144900 143 7e-35
Os09g0273800 Similar to Fimbriata-associated protein (Fragm... 135 2e-32
Os08g0375500 134 4e-32
Os09g0274700 133 6e-32
Os09g0274800 132 1e-31
Os07g0144800 130 4e-31
Os09g0274432 128 2e-30
Os06g0113800 Similar to Kinetechore (Skp1p-like) protein-like 125 2e-29
Os07g0624900 120 3e-28
Os10g0438100 Similar to Fimbriata-associated protein (Fragm... 120 6e-28
Os07g0625500 Similar to Fimbriata-associated protein (Fragm... 114 4e-26
Os09g0272900 Similar to Skp1 (Fragment) 107 4e-24
Os07g0409500 SKP1 component family protein 100 6e-22
Os09g0539500 SKP1 component family protein 100 6e-22
Os02g0101600 SKP1 component family protein 97 5e-21
Os09g0275200 Similar to Fimbriata-associated protein (Fragm... 96 1e-20
Os07g0625000 79 1e-15
Os09g0272700 75 4e-14
>Os11g0456300 Similar to Fimbriata-associated protein (Fragment)
Length = 173
Score = 248 bits (633), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 128/173 (73%)
Query: 1 MAAEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVI 60
MAAEGEKKMITLKSSDG SQTIRHMIEDDCADNGIPLPNVNSKILSKVI
Sbjct: 1 MAAEGEKKMITLKSSDGEEFEVEEPVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVI 60
Query: 61 EYCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAANY 120
EYCN PPPSGEDLKNWDADFVKVDQATLFDLILAANY
Sbjct: 61 EYCNKHVHAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANY 120
Query: 121 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP NQWAFE
Sbjct: 121 LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173
>Os07g0145300
Length = 164
Score = 147 bits (371), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 98/172 (56%), Gaps = 19/172 (11%)
Query: 2 AAEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIE 61
AA I L SSDG SQ + +MIEDDC NG+PLPNV SK+L+KVIE
Sbjct: 12 AAGSGSDTILLISSDGEHFNVPSAAASLSQLVSNMIEDDCTTNGVPLPNVASKVLAKVIE 71
Query: 62 YCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAANYL 121
YC +DLK++DA+F+ VD+ L+DL+LA+N++
Sbjct: 72 YC-------------------IKHAAAGEEEEKDLKSFDAEFIDVDKNMLYDLLLASNFM 112
Query: 122 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
NIK LLDL CQ A++IKGK+PE+IRK F IKNDFTP N WAFE
Sbjct: 113 NIKSLLDLCCQHTANLIKGKSPEQIRKEFGIKNDFTPEEEEEIRKENTWAFE 164
>Os08g0375700 SKP1 component family protein
Length = 169
Score = 146 bits (368), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 98/171 (57%), Gaps = 7/171 (4%)
Query: 3 AEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEY 62
A+ +KMI L SSDG S+T+ HMIEDDC DNG+PLPNV + +L+KV+EY
Sbjct: 5 ADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAKVVEY 64
Query: 63 CNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAANYLN 122
E+LK++DA+FV VD+ +F+LILAAN+LN
Sbjct: 65 FKKHAAVTPKPATEAVAAD-------KAKREEELKSFDAEFVDVDRTMVFELILAANFLN 117
Query: 123 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
+ LLDLTCQ AD+IK + EE+R+ FNI NDFTP N WAF+
Sbjct: 118 AQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168
>Os07g0144900
Length = 172
Score = 143 bits (360), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 100/171 (58%), Gaps = 11/171 (6%)
Query: 4 EGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYC 63
+G KMI L S+DG SQ I +MIEDDC +NG+ LPNV+ IL+ V++YC
Sbjct: 11 DGGGKMIILISADGKRFEVTEAVASQSQLISNMIEDDCTENGVRLPNVDGDILTMVVDYC 70
Query: 64 NXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVK-VDQATLFDLILAANYLN 122
N + E+LK +DA+ V+ ++ LF LILAAN+LN
Sbjct: 71 NMHAGDAAAAGDTMK----------ASSTEEELKKFDAELVQALENPVLFKLILAANFLN 120
Query: 123 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
IK LLD+TCQ VADM+ GKTPE++R+TF+I+NDFTP N WAF+
Sbjct: 121 IKSLLDMTCQRVADMMSGKTPEQMRETFSIENDFTPEEEAAIRQENAWAFD 171
>Os09g0273800 Similar to Fimbriata-associated protein (Fragment)
Length = 167
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 10 ITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNXXXXX 69
I L SSDG S+ + +MIEDDC +NG+PLPNV S +L+KV++YC
Sbjct: 15 ILLISSDGQHFQVTEAEASMSKLVSNMIEDDCTENGVPLPNVASNVLAKVLDYCKKHAAA 74
Query: 70 XXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKGLLDL 129
++LK++DA F+ VD LF LILAANYLN+ LLDL
Sbjct: 75 AAAAAEDVAV------------KDQELKSFDASFIDVDNTMLFGLILAANYLNVPSLLDL 122
Query: 130 TCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
CQ AD+IKGKT +EIR TF I NDFTP N+WAFE
Sbjct: 123 ACQHTADLIKGKTVQEIRDTFGIVNDFTPEEEEEIRKENEWAFE 166
>Os08g0375500
Length = 169
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 97/171 (56%), Gaps = 7/171 (4%)
Query: 3 AEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEY 62
A+ +KMI L SSDG S+T+ HMIEDDC DNG+PLPNV + +L KV+EY
Sbjct: 5 ADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLVKVVEY 64
Query: 63 CNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAANYLN 122
E+LK++DA+FV VD+ LF+LILAAN+LN
Sbjct: 65 FKKHAAVTPKPATEAVVAD-------KAKREEELKSFDAEFVDVDRTMLFELILAANFLN 117
Query: 123 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
+ LLDLTCQ AD+IK + EE+R+ FNI NDFTP N WAF+
Sbjct: 118 AQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168
>Os09g0274700
Length = 165
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Query: 2 AAEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIE 61
A G+ K I L SSDG S+ + +MIED C +NG+PLPNV S +L+KV+E
Sbjct: 8 ADAGDSK-ILLISSDGQHFQVTEAEASMSKLVSNMIEDGCTENGVPLPNVASNVLAKVLE 66
Query: 62 YCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAANYL 121
YC ++LK++DA F+ VD LF+LILAANYL
Sbjct: 67 YCKKHAAAAAAEDVAV--------------KDQELKSFDASFIDVDNTMLFNLILAANYL 112
Query: 122 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
N+ LLDL CQ AD+IKGKT +EIR F I NDFTP N+WAFE
Sbjct: 113 NVPSLLDLACQHTADLIKGKTVQEIRDMFGIVNDFTPEEEEEIRKENEWAFE 164
>Os09g0274800
Length = 172
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Query: 7 KKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNG-IPLPNVNSKILSKVIEYCNX 65
+KMI L SSDG S+T+ +MIEDDCA NG IPL NV S IL+KV+EYCN
Sbjct: 15 EKMILLISSDGAKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVASDILAKVVEYCN- 73
Query: 66 XXXXXXXXXXXXXXXXXXXXXXXPPPSG-EDLKNWDADFVKVDQATLFDLILAANYLNIK 124
SG E+L +DA+FV VD+ LF LI AAN+LN+
Sbjct: 74 -----------KHAAATATATAAAKASGEEELSKFDAEFVSVDRKKLFGLINAANFLNMP 122
Query: 125 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
LL+LTCQ AD+IK PE++R+ F I+NDFTP N WA+E
Sbjct: 123 CLLELTCQRAADLIKDMMPEQVREVFGIENDFTPEEEAEVRNENAWAYE 171
>Os07g0144800
Length = 157
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 21/165 (12%)
Query: 10 ITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNXXXXX 69
I L SSDG SQ + +MIE+DC NG+PLPNV SK+L+KVIEYC
Sbjct: 13 ILLISSDGEHFNVPSAAASLSQLVSNMIENDCTTNGVPLPNVASKVLAKVIEYC------ 66
Query: 70 XXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADF-VKVDQATLFDLILAANYLNIKGLLD 128
++LK++DA+F + VD+ L+ L+LA+N+LNIK LLD
Sbjct: 67 -------------VKHAAAAEDEEKELKSFDAEFMIDVDKNMLYGLLLASNFLNIKSLLD 113
Query: 129 LTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
L CQ A++IKGK+PE+IRK F IKNDFTP N WAFE
Sbjct: 114 LCCQHTANLIKGKSPEQIRKEFGIKNDFTP-EEEEIRKENTWAFE 157
>Os09g0274432
Length = 167
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 95/170 (55%), Gaps = 21/170 (12%)
Query: 7 KKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNG-IPLPNVNSKILSKVIEYCNX 65
KKMI L SSDG S+T+ +MIEDDCA NG IPL NV + IL+ V+EYCN
Sbjct: 15 KKMILLVSSDGVKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVAADILAMVVEYCNR 74
Query: 66 XXXXXXXXXXXXXXXXXXXXXXXPPPSGED--LKNWDADFVKVDQATLFDLILAANYLNI 123
SG++ ++ +DA+FV +D+ LF LI AAN+LN+
Sbjct: 75 HAAAAANA------------------SGQEELIRKFDAEFVNIDRKKLFGLINAANFLNM 116
Query: 124 KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
LL+LTCQ AD+IK PE++R+ F I+NDFTP N WA+E
Sbjct: 117 PCLLELTCQRTADLIKDMMPEQVREVFGIENDFTPEEEAEVRNENAWAYE 166
>Os06g0113800 Similar to Kinetechore (Skp1p-like) protein-like
Length = 166
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 92/178 (51%), Gaps = 18/178 (10%)
Query: 1 MAAEGE---KKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNG---IPLPNVNSK 54
MAA E KKMI + SSDG S+ + HMIED C +G I LPNV
Sbjct: 1 MAAAAEEKNKKMIKVISSDGEAFEMTEAAASMSRILLHMIEDGCTGDGGAGITLPNVAGS 60
Query: 55 ILSKVIEYCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDL 114
L+KVIEYC + E+LK +D +F++V L+DL
Sbjct: 61 ALAKVIEYCTKHAIAAAEGSSS------------SRKAKEELKKFDVEFMEVGIDMLYDL 108
Query: 115 ILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 172
I+AAN++ ++GLL L Q A++IKGK+PE+IR+ F IKND TP +WAF
Sbjct: 109 IMAANFMGVEGLLSLAAQRTAELIKGKSPEQIREMFGIKNDHTPEEEEQIRKEYEWAF 166
>Os07g0624900
Length = 200
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 88/174 (50%), Gaps = 25/174 (14%)
Query: 5 GEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMI----EDDCADNGIPLPNVNSKILSKVI 60
G ++ I LKS DG S+TI MI AD IP P+++ L V+
Sbjct: 46 GGRRTIHLKSKDGKQHDVTEASARLSKTIAGMILAGGGGGGADQCIPTPDIDHDTLRVVM 105
Query: 61 EYCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFV-KVDQATLFDLILAAN 119
+YC+ EDLK WD DFV ++DQ LFD+I AAN
Sbjct: 106 QYCDKHAADDADE--------------------EDLKEWDEDFVDELDQDALFDVIAAAN 145
Query: 120 YLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
YL+I GLLDLTC+ VAD IKGKTPEEIRK FNI ND + N WAFE
Sbjct: 146 YLDIDGLLDLTCKRVADTIKGKTPEEIRKEFNIVNDLSKEEEEEIRRENPWAFE 199
>Os10g0438100 Similar to Fimbriata-associated protein (Fragment)
Length = 220
Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 5 GEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCN 64
GEK + L S DG S+T+R MIED+CA IP+ V+S +L+ ++EYC
Sbjct: 38 GEK--LVLVSDDGVEVLASVAAARVSKTLRGMIEDECATGAIPIAGVHSDVLALLVEYCE 95
Query: 65 XXXXXXXXXXXXXXXXXXXXXXXXPPPSGED---------------LKNWDADFVKVDQA 109
PP+ LK +D F+ VD +
Sbjct: 96 RHAPHYDPEASDRDRYPFPPFPVELPPTASSIKPVTFVDPDADPHGLKAFDKKFLDVDNS 155
Query: 110 TLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQ 169
TLF++I+AANYLNI+ LLD C VAD ++GK PEEIR F I+ND+TP N
Sbjct: 156 TLFEIIMAANYLNIEELLDDACTAVADKMRGKKPEEIRDIFEIENDYTPEQEAEVRRENA 215
Query: 170 WAFE 173
WAFE
Sbjct: 216 WAFE 219
>Os07g0625500 Similar to Fimbriata-associated protein (Fragment)
Length = 174
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 84/158 (53%), Gaps = 20/158 (12%)
Query: 4 EGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDD-CADNGIPLPNVNSKILSKVIEY 62
E +MITL S++G S TIR M++D C D G PLPNV+SK L++VI+Y
Sbjct: 19 ESGSRMITLTSNEGKAFVVTEASARQSATIRSMVDDGGCVDKGFPLPNVDSKTLARVIQY 78
Query: 63 CNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVK---VDQATLFDLILAAN 119
C+ L +D DF+ D+A L+D+ +AAN
Sbjct: 79 CDEHGNKEPHTVDERAA----------------LAKFDRDFIAELDADKAFLYDVTMAAN 122
Query: 120 YLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 157
YL+I+GLL LT Q VAD IKGKTPEEIR F I+ D T
Sbjct: 123 YLHIQGLLALTTQCVADTIKGKTPEEIRTAFGIEYDLT 160
>Os09g0272900 Similar to Skp1 (Fragment)
Length = 198
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 2 AAEGEKKMITLKSSDGXXXXXXXXXXXXSQTIR-HMIEDDC-ADNGIPLPNVNSKILSKV 59
AA GE M+TL SSDG SQT+ M +DD A NGIPLPNV +L+KV
Sbjct: 33 AAAGE--MVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDVLAKV 90
Query: 60 IEYCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVKVDQATLFDLILAAN 119
+EYC +K++D +F+ VD L+ L+ AA+
Sbjct: 91 VEYCTKHASAAAAAINADTAKTSKEEEELM------MKSFDDEFILVDNHMLYSLLTAAD 144
Query: 120 YLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP 158
+ I+GL+DL CQ +ADMIKGKT E++R+T I NDFTP
Sbjct: 145 AMRIQGLMDLACQRLADMIKGKTSEQMRQTLGITNDFTP 183
>Os07g0409500 SKP1 component family protein
Length = 190
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 2 AAEGEK---KMITLKSSDGXXXXXXXXXXXXSQTIRHMIED-DCADNG--IPLPN-VNSK 54
+ EGEK K I+ + SDG S IR M + D+G I LP+ ++S
Sbjct: 6 SGEGEKAGGKTISFRCSDGQAFHMPVAAAMLSTAIRKMFDKYPSIDHGGVIELPHQISSG 65
Query: 55 ILSKVIEYCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSG---EDLKNWDADFVKVDQATL 111
I KV EYC + EDLKNWD +FV ++ L
Sbjct: 66 IFPKVKEYCTKHAKVDDKGNPTVSTNTGAAAAASSSSTDDEEEDLKNWDKEFVNMEVKPL 125
Query: 112 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 171
DL+L A+ L+IKGL +TC+ VADM+KGKT EE+R+ NI+NDFT N W
Sbjct: 126 HDLLLVAHLLDIKGLFHITCRKVADMLKGKTSEEMRQILNIRNDFTEEEDKAIKEQNPWV 185
Query: 172 F 172
F
Sbjct: 186 F 186
>Os09g0539500 SKP1 component family protein
Length = 79
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 48/57 (84%)
Query: 117 AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 173
AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP NQWAFE
Sbjct: 23 AANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 79
>Os02g0101600 SKP1 component family protein
Length = 101
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 2 AAEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIE 61
AAEGEKKMITLKSSDG SQTIRHMIED CADNGIPLPNVNSKILSKVIE
Sbjct: 4 AAEGEKKMITLKSSDGEEFEVEAVGME-SQTIRHMIEDKCADNGIPLPNVNSKILSKVIE 62
Query: 62 YCN 64
YCN
Sbjct: 63 YCN 65
>Os09g0275200 Similar to Fimbriata-associated protein (Fragment)
Length = 160
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 3 AEGEKKMITLKSSDGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEY 62
E KK I L S DG +T+R MI+ IPLPNV S IL++V++Y
Sbjct: 9 GEEVKKTIDLVSKDGERFEVARDAALLCKTLRWMIKGGYGR--IPLPNVASPILARVVDY 66
Query: 63 CNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDLKNWDADFVK-VDQATLFDLILAANYL 121
+ L +D DF+ VDQ TLFDL+LAANYL
Sbjct: 67 LARHAAAAAAM------------------DDDGLDRFDRDFLAGVDQDTLFDLLLAANYL 108
Query: 122 NIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 172
GLLDL C+ VA M+ GK+PE++R+ F+I ND TP WA
Sbjct: 109 QADGLLDLACKKVAAMMTGKSPEQMREIFHIVNDLTPEEEKEIREDIAWAL 159
>Os07g0625000
Length = 724
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 16 DGXXXXXXXXXXXXSQTIRHMIEDDCADNGIPLPNVNSKILSKVIEYCNXXXXXXXXXXX 75
DG S+ I I+ IPLP+V+ K L KVIEYC+
Sbjct: 115 DGEPVEVTEASARISKVIGDKIDAGRGGEAIPLPHVDKKTLKKVIEYCDEHANENSDTDE 174
Query: 76 XXXXXXXXXXXXXPPPSGEDLKNWDADFV----KVDQATLFDLILAANYLNIKGLLDLTC 131
E+LKNWD F+ + D + LF ++LA++YL I GLLDLT
Sbjct: 175 QK----------------EELKNWDKAFIDELDEDDGSFLFLVLLASSYLKIDGLLDLTY 218
Query: 132 QTVADMIKGKTPEEIRKTFN 151
Q VAD K KT EEIRKTF+
Sbjct: 219 QRVADNSKAKTTEEIRKTFS 238
>Os09g0272700
Length = 142
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 37 IEDDCADNGIPLPNVNSKILSKVIEYCNXXXXXXXXXXXXXXXXXXXXXXXXPPPSGEDL 96
++ DNGIP+PNV +++K YC ++L
Sbjct: 28 LDHHAGDNGIPIPNVADNVIAK--RYC------------MKHATLSSGTGDMKAMHEDEL 73
Query: 97 KNWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKN 154
K +D F+KVD TL LI AAN + +KGL+DL CQ VADM+K K +++R+T I N
Sbjct: 74 KKFDRVFIKVDNDTLRRLISAANVMGVKGLIDLACQRVADMLKAKRLKKMRQTSGINN 131
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,283,234
Number of extensions: 115888
Number of successful extensions: 278
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 273
Number of HSP's successfully gapped: 23
Length of query: 173
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 79
Effective length of database: 12,127,685
Effective search space: 958087115
Effective search space used: 958087115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)