BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0442400 Os08g0442400|AK106769
(419 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0442400 Similar to BABY BOOM 577 e-165
Os09g0423800 Similar to AP2-1 protein (Fragment) 342 3e-94
Os06g0145700 271 8e-73
Os05g0536250 259 2e-69
Os12g0126300 Similar to AP2-1 protein (Fragment) 252 3e-67
Os06g0657500 Similar to ANT (Ovule development protein aint... 238 5e-63
Os03g0232200 Similar to BABY BOOM 236 2e-62
Os04g0653600 Similar to AINTEGUMENTA-like protein 236 3e-62
Os01g0813300 223 2e-58
Os03g0313100 Similar to ANT-like protein 197 1e-50
Os07g0124700 Similar to PLETHORA1 195 4e-50
Os07g0235800 Pathogenesis-related transcriptional factor an... 145 4e-35
Os01g0899800 Pathogenesis-related transcriptional factor an... 143 2e-34
Os02g0614300 Similar to ANT-like protein 131 9e-31
Os03g0818800 Similar to Floral homeotic protein 114 1e-25
Os05g0389000 Similar to AP2-1 protein (Fragment) 109 4e-24
Os05g0121600 Similar to AP2 domain containing protein RAP2.... 104 2e-22
>Os08g0442400 Similar to BABY BOOM
Length = 419
Score = 577 bits (1486), Expect = e-165, Method: Compositional matrix adjust.
Identities = 298/419 (71%), Positives = 298/419 (71%)
Query: 1 MAKRRSNGETAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCPSQRSSAFRGVT 60
MAKRRSNGETAAA DCPSQRSSAFRGVT
Sbjct: 1 MAKRRSNGETAAASSDDSSSGVCGGGGGGEVEPRRRQKRPRRSAPRDCPSQRSSAFRGVT 60
Query: 61 RHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXXLKYWGHDTVLNF 120
RHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEE LKYWGHDTVLNF
Sbjct: 61 RHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEAAARAYDLAALKYWGHDTVLNF 120
Query: 121 PLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGN 180
PLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGN
Sbjct: 121 PLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGN 180
Query: 181 KYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRWYHGSCRXXXXXXXTTXXX 240
KYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRWYHGSCR TT
Sbjct: 181 KYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRWYHGSCRSSSAAAATTIED 240
Query: 241 XXXXXXXXXXLQGVDEQPSSSPXXXXXXXXXXXXXXXXXXXXPPQLRPLARAASTSPIGL 300
LQGVDEQPSSSP PPQLRPLARAASTSPIGL
Sbjct: 241 DDFAEAIAAALQGVDEQPSSSPATTRQLQTADDDDDDLVAQLPPQLRPLARAASTSPIGL 300
Query: 301 LLRSPKFKEIIEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQPTVPKD 360
LLRSPKFKEIIEQ QQQPTVPKD
Sbjct: 301 LLRSPKFKEIIEQAAAAAASSSGSSSSSSTDSPSSSSSSSLSPSPLPSPPPQQQPTVPKD 360
Query: 361 DQYNVDMSSVAAARCSFPDDVQTYFGLDDDGFGYPEVDTFLFGDLGAYAAPMFQFELDV 419
DQYNVDMSSVAAARCSFPDDVQTYFGLDDDGFGYPEVDTFLFGDLGAYAAPMFQFELDV
Sbjct: 361 DQYNVDMSSVAAARCSFPDDVQTYFGLDDDGFGYPEVDTFLFGDLGAYAAPMFQFELDV 419
>Os09g0423800 Similar to AP2-1 protein (Fragment)
Length = 365
Score = 342 bits (877), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/377 (51%), Positives = 224/377 (59%), Gaps = 40/377 (10%)
Query: 47 DCPSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXX 106
+ PSQRSS +RGVTRHRWTGRFEAHLWDKN+WNESQ+KKG+QVYLGAYD EE
Sbjct: 25 ESPSQRSSVYRGVTRHRWTGRFEAHLWDKNSWNESQNKKGKQVYLGAYDDEEAAARAYDL 84
Query: 107 XXLKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHH 166
LKYWG DT+LNFPLS Y+ ELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHH
Sbjct: 85 AALKYWGPDTILNFPLSAYEGELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHH 144
Query: 167 NGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRWYHGS 226
NG+WEARIGRVFGNKYLYLGTYATQEEAA+AYD+AAIE+RGLNAVTNFD++ YI+W
Sbjct: 145 NGRWEARIGRVFGNKYLYLGTYATQEEAAMAYDMAAIEYRGLNAVTNFDLSRYIKWLRPG 204
Query: 227 CRXXXXXXXTTXXXXXXXXXXXXXLQGVDEQPSSSPXXXXXXXXXXXXXXXXXXXXPPQL 286
L +D +S P
Sbjct: 205 A---DGAGAPQNPHPMLGALSAQDLPAIDLDAMASSFQHDGHGAAAAAAQLI-----PAR 256
Query: 287 RPLARAASTSPIGLLLRSPKFKEIIEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
L +TS + LLL+SPKFKE+IE+
Sbjct: 257 HSLGHTPTTSALSLLLQSPKFKEMIER------------------TSAAETTTTSSTTTS 298
Query: 347 XXXXXQQQPTVPKDDQYNVDMSSVAAARCSFPDDVQTYF----GLDDDGFGYPEVDTFLF 402
Q T KDD A+ +CSFP+D+QTYF G GY +VD F
Sbjct: 299 SSSPSPPQAT--KDDG--------ASPQCSFPEDIQTYFGCAAEDGAAGAGYADVDGLFF 348
Query: 403 GDLGAYAAPMFQFELDV 419
GDL AYA+P F FELD+
Sbjct: 349 GDLAAYASPAFHFELDL 365
>Os06g0145700
Length = 399
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 126/176 (71%), Positives = 149/176 (84%)
Query: 47 DCPSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXX 106
+ ++RSS FRGV+RHRWTGRFEAHLWDK TWN +Q KKG+QVYLGAY+ E+
Sbjct: 73 NAANKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNEEDAAARAYDL 132
Query: 107 XXLKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHH 166
LKYWG T NFP++ Y++ELK M+G S+EEY+ S+RRKS+GFSRGVSKYRGVARHHH
Sbjct: 133 AALKYWGPTTYTNFPVADYEKELKLMQGVSKEEYLASIRRKSNGFSRGVSKYRGVARHHH 192
Query: 167 NGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYIRW 222
NG+WEARIGRVFGNKYLYLGTY+TQEEAA AYDIAAIE+RG+NAVTNFD++ YIRW
Sbjct: 193 NGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRW 248
>Os05g0536250
Length = 431
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 143/186 (76%), Gaps = 14/186 (7%)
Query: 51 QRSSAFRGVTR--------------HRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDG 96
+RSS FRGV+R HRWTGRFEAHLWDKN+WN +Q KKG+QVYLGAYD
Sbjct: 72 KRSSRFRGVSRFRACRDDKKMLSCRHRWTGRFEAHLWDKNSWNPTQRKKGKQVYLGAYDE 131
Query: 97 EEXXXXXXXXXXLKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVS 156
EE LKYWG T NFP+ Y++ELK ME ++EEY+ SLRRKSSGFSRGVS
Sbjct: 132 EEAAARAYDLAALKYWGPTTYTNFPVMDYEKELKIMENLTKEEYLASLRRKSSGFSRGVS 191
Query: 157 KYRGVARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDI 216
KYRGVARHH NG+WEARIGRVFGNKYLYLGTY+TQEEAA AYDIAAIE++G+NAVTNFD+
Sbjct: 192 KYRGVARHHQNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYKGVNAVTNFDL 251
Query: 217 NLYIRW 222
YI W
Sbjct: 252 RSYITW 257
>Os12g0126300 Similar to AP2-1 protein (Fragment)
Length = 443
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 138/171 (80%), Gaps = 4/171 (2%)
Query: 51 QRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKK-GRQVYLGAYDGEEXXXXXXXXXXL 109
+RSS +RGVTRHRWTGRFEAHLWDKN Q+KK GRQ GAYD EE L
Sbjct: 76 KRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GAYDSEEAAARAYDLAAL 132
Query: 110 KYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGK 169
KYWG +TVLNFPL Y++E EMEG SREEY+ SLRR+SSGFSRGVSKYRGVARHHHNG+
Sbjct: 133 KYWGPETVLNFPLEEYEKERSEMEGVSREEYLASLRRRSSGFSRGVSKYRGVARHHHNGR 192
Query: 170 WEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYI 220
WEARIGRV GNKYLYLGT+ TQEEAA AYD+AAIE+RG NAVTNFDI+ Y+
Sbjct: 193 WEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCYL 243
>Os06g0657500 Similar to ANT (Ovule development protein aintegumenta)
Length = 469
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 133/169 (78%)
Query: 51 QRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXXLK 110
QR+S +RGVTRHRWTGR+EAHLWD + E QS+KGRQVYLG YD EE LK
Sbjct: 126 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALK 185
Query: 111 YWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKW 170
YWG T NFP++ Y+ EL+EM+ +R+E+I SLRRKSSGFSRG S YRGV RHH +G+W
Sbjct: 186 YWGPTTTTNFPVANYETELEEMKSMTRQEFIASLRRKSSGFSRGASIYRGVTRHHQHGRW 245
Query: 171 EARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
+ARIGRV GNK LYLGT++TQEEAA AYDIAAI+ RGLNAVTNFD++ Y
Sbjct: 246 QARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRY 294
>Os03g0232200 Similar to BABY BOOM
Length = 642
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 131/169 (77%)
Query: 51 QRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXXLK 110
QR+S +RGVTRHRWTGR+EAHLWD + + Q++KGRQVYLG YD E+ LK
Sbjct: 287 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKDGQTRKGRQVYLGGYDTEDKAARAYDLAALK 346
Query: 111 YWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKW 170
YWG T +NFPL Y +E++EME +R+EY+ LRR+SSGFSRG S YRGV RHH +G+W
Sbjct: 347 YWGLSTHINFPLENYRDEIEEMERMTRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGRW 406
Query: 171 EARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
+ARIGRV GNK LYLGT++TQEEAA AYDIAAI+ RGLNAVTNFDI Y
Sbjct: 407 QARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRY 455
>Os04g0653600 Similar to AINTEGUMENTA-like protein
Length = 495
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 133/173 (76%)
Query: 47 DCPSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXX 106
D QR+S +RGVTRHRWTGR+EAHLWD + E QS+KGRQVYLG YD EE
Sbjct: 136 DSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDL 195
Query: 107 XXLKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHH 166
LKYWG T NFP++ Y++EL+EM+ +R+E++ SLRRKSSGFSRG S YRGV RHH
Sbjct: 196 AALKYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQ 255
Query: 167 NGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
+G+W+ARIGRV GNK LYLGT+ T+EEAA AYDIAAI+ RGLNAVTNF+I Y
Sbjct: 256 HGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRY 308
>Os01g0813300
Length = 426
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 131/172 (76%), Gaps = 4/172 (2%)
Query: 49 PSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKK-GRQVYLGAYDGEEXXXXXXXXX 107
P + SS ++GV RHR +G++EAHLWDK WN +Q++K GRQ GAYD EE
Sbjct: 72 PRKGSSIYKGVARHRGSGKYEAHLWDKQGWNPNQTRKRGRQ---GAYDTEEAAARTYDLA 128
Query: 108 XLKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHN 167
LK WG D VLNFP+ TY +EL+ M+ +REEY+ +LRRKSSGFSRGVSKYRGVA+HHHN
Sbjct: 129 ALKIWGSDHVLNFPIDTYRKELERMQRMTREEYLATLRRKSSGFSRGVSKYRGVAKHHHN 188
Query: 168 GKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
G+WEARIGR G KYLYLGT+ TQEEAA AYD+AAI+ RG +AVTNFD + Y
Sbjct: 189 GRWEARIGRAVGKKYLYLGTFDTQEEAATAYDLAAIQLRGRSAVTNFDASCY 240
>Os03g0313100 Similar to ANT-like protein
Length = 431
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 127/169 (75%)
Query: 51 QRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXXLK 110
QR+S +RGVTRHRWTGR+EAHLWD E Q +KGRQVYLG YD E+ LK
Sbjct: 130 QRTSCYRGVTRHRWTGRYEAHLWDNTCRREGQKRKGRQVYLGGYDIEDKAARAYDLAALK 189
Query: 111 YWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKW 170
YWG + NFP +Y +E++EM+ S++E + SLRRKSSGFSRG S YRGV RHH +G+W
Sbjct: 190 YWGANATTNFPKESYVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGVTRHHQHGRW 249
Query: 171 EARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
+ARIGRV GNK LYLGT+AT+EEAA AYD+AA++ RG NAVTNF+ + Y
Sbjct: 250 QARIGRVAGNKDLYLGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRY 298
>Os07g0124700 Similar to PLETHORA1
Length = 331
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 107/140 (76%)
Query: 80 ESQSKKGRQVYLGAYDGEEXXXXXXXXXXLKYWGHDTVLNFPLSTYDEELKEMEGQSREE 139
E Q++KGRQVYLG YD EE LKYWG T +NFPL Y EEL+EM+ +R+E
Sbjct: 2 EGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQE 61
Query: 140 YIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAAVAYD 199
Y+ LRRKSSGFSRG S YRGV RHH +G+W+ARIGRV GNK LYLGT++TQEEAA AYD
Sbjct: 62 YVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYD 121
Query: 200 IAAIEHRGLNAVTNFDINLY 219
+AAI+ RGLNAVTNFDI Y
Sbjct: 122 VAAIKFRGLNAVTNFDITRY 141
>Os07g0235800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 436
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 11/164 (6%)
Query: 56 FRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXXLKYWGHD 115
+RGVT +R TGR+E+H+WD G+QVYLG +D +K+ G D
Sbjct: 123 YRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTAHAAARAYDRAAIKFRGLD 172
Query: 116 TVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIG 175
+NF L+ Y+++LK+M ++EE++ LRR+S+GF+RG SKYRGV H G+WEAR+G
Sbjct: 173 ADINFNLNDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTL-HKCGRWEARMG 231
Query: 176 RVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
++ G KY+YLG + ++ EAA AYD AAI G AVTNFD + Y
Sbjct: 232 QLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGREAVTNFDPSSY 275
>Os01g0899800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 343
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 83/95 (87%)
Query: 125 YDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGNKYLY 184
Y++EL+EM+ +R+E++ SLRRKSSGFSRG S YRGV RHH +G+W+ARIGRV GNK LY
Sbjct: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Query: 185 LGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLY 219
LGT++TQEEAA AYDIAAI+ RGLNAVTNFD++ Y
Sbjct: 61 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRY 95
>Os02g0614300 Similar to ANT-like protein
Length = 321
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 73/84 (86%)
Query: 136 SREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAA 195
+R+EYI LRR SSGFSRG SKYRGV RHH +G+W+ARIGRV GNK LYLGT++T+EEAA
Sbjct: 2 TRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAA 61
Query: 196 VAYDIAAIEHRGLNAVTNFDINLY 219
AYDIAAI+ RGLNAVTNFD++ Y
Sbjct: 62 EAYDIAAIKFRGLNAVTNFDMSRY 85
>Os03g0818800 Similar to Floral homeotic protein
Length = 446
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 102/202 (50%), Gaps = 61/202 (30%)
Query: 49 PSQRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXX 108
P RSS +RGVT +R TGR+E+H+W AYD
Sbjct: 112 PRSRSSQYRGVTFYRRTGRWESHIW-------------------AYD----------RAA 142
Query: 109 LKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNG 168
+K+ G + +NF LS Y+++LK+M ++EE++ LRR+S+GF+RG SK+RGV H G
Sbjct: 143 IKFRGLEADINFNLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVTL-HKCG 201
Query: 169 KWEARIGRVFGNKYLYLGTYATQEEAA-------------------------------VA 197
+WEAR+G++ G KY+YLG + T+ EAA A
Sbjct: 202 RWEARMGQLLGKKYIYLGLFDTEVEAARYYSFDEVTCMTSHELPGFSLTFDSCLVEFGRA 261
Query: 198 YDIAAIEHRGLNAVTNFDINLY 219
YD AAI G AVTNF+ Y
Sbjct: 262 YDRAAIRFNGREAVTNFEPASY 283
>Os05g0389000 Similar to AP2-1 protein (Fragment)
Length = 300
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 92 GAYDGEEXXXXXXXXXXLKYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGF 151
GAYD EE LKYWG T +NFP+S Y +L+EM+ S+E+Y+ SLRRKSS F
Sbjct: 1 GAYDDEEAAARAYDLAALKYWGAGTQINFPVSDYARDLEEMQMISKEDYLVSLRRKSSAF 60
Query: 152 SRGVSKYRGVARHHHNGKWEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAV 211
SRG+ KYRG+ R HN +W+A +G + GN Y+ LG T + +E +
Sbjct: 61 SRGLPKYRGLPRQLHNSRWDASLGHLLGNDYMSLGKDITLDGKFAG--TFGLERK----- 113
Query: 212 TNFDINLYIRWY 223
D+ YIRW+
Sbjct: 114 --IDLTNYIRWW 123
>Os05g0121600 Similar to AP2 domain containing protein RAP2.7 (Fragment)
Length = 130
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 11/126 (8%)
Query: 56 FRGVTRHRWTGRFEAHLWDKNTWNESQSKKGRQVYLGAYDGEEXXXXXXXXXXLKYWGHD 115
+RGVT +R TGR+E+H+WD G+QVYLG +D +K+ G +
Sbjct: 16 YRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTAHAAARAYDRAAIKFRGVE 65
Query: 116 TVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGKWEARIG 175
+NF LS Y+E++++M+ S+EE++ LRR+S+GFSRG SKYRGV H G+WEAR+G
Sbjct: 66 ADINFNLSDYEEDMRQMKSLSKEEFVHVLRRQSTGFSRGSSKYRGVT-LHKCGRWEARMG 124
Query: 176 RVFGNK 181
+ G K
Sbjct: 125 QFLGKK 130
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,789,718
Number of extensions: 381695
Number of successful extensions: 1123
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1092
Number of HSP's successfully gapped: 17
Length of query: 419
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 316
Effective length of database: 11,657,759
Effective search space: 3683851844
Effective search space used: 3683851844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)